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Seasonal and spatial variation in Toxoplasma gondii contamination in soil in urban public spaces in California, United States.

de Wit LA, Kilpatrick AM, VanWormer E, Croll DA, Tershy BR, Kim M, Shapiro K.

Zoonoses Public Health. 2019 Nov 1. doi: 10.1111/zph.12656. [Epub ahead of print]


Complex Evolutionary Origins of Specialized Metabolite Gene Cluster Diversity among the Plant Pathogenic Fungi of the Fusarium graminearum Species Complex.

Tralamazza SM, Rocha LO, Oggenfuss U, Corrêa B, Croll D.

Genome Biol Evol. 2019 Nov 1;11(11):3106-3122. doi: 10.1093/gbe/evz225.


Stress-driven transposable element de-repression dynamics and virulence evolution in a fungal pathogen.

Fouché S, Badet T, Oggenfuss U, Plissonneau C, Francisco CS, Croll D.

Mol Biol Evol. 2019 Sep 25. pii: msz216. doi: 10.1093/molbev/msz216. [Epub ahead of print]


Clinical evaluation for morbidity associated with soil-transmitted helminth infection in school-age children on Pemba Island, Tanzania.

Bogoch II, Speich B, Lo NC, Moser W, Croll D, Ali SM, Ame SM, Utzinger J, Andrews JR, Keiser J.

PLoS Negl Trop Dis. 2019 Jul 15;13(7):e0007581. doi: 10.1371/journal.pntd.0007581. eCollection 2019 Jul.


Erratum for Attarian et al., "The Monothiol Glutaredoxin Grx4 Regulates Iron Homeostasis and Virulence in Cryptococcus neoformans".

Attarian R, Hu G, Sánchez-León E, Caza M, Croll D, Do E, Bach H, Missall T, Lodge J, Jung WH, Kronstad JW.

mBio. 2019 Apr 30;10(2). pii: e00647-19. doi: 10.1128/mBio.00647-19. No abstract available.


Globally important islands where eradicating invasive mammals will benefit highly threatened vertebrates.

Holmes ND, Spatz DR, Oppel S, Tershy B, Croll DA, Keitt B, Genovesi P, Burfield IJ, Will DJ, Bond AL, Wegmann A, Aguirre-Muñoz A, Raine AF, Knapp CR, Hung CH, Wingate D, Hagen E, Méndez-Sánchez F, Rocamora G, Yuan HW, Fric J, Millett J, Russell J, Liske-Clark J, Vidal E, Jourdan H, Campbell K, Springer K, Swinnerton K, Gibbons-Decherong L, Langrand O, Brooke ML, McMinn M, Bunbury N, Oliveira N, Sposimo P, Geraldes P, McClelland P, Hodum P, Ryan PG, Borroto-Páez R, Pierce R, Griffiths R, Fisher RN, Wanless R, Pasachnik SA, Cranwell S, Micol T, Butchart SHM.

PLoS One. 2019 Mar 27;14(3):e0212128. doi: 10.1371/journal.pone.0212128. eCollection 2019.


The emergence of the multi-species NIP1 effector in Rhynchosporium was accompanied by high rates of gene duplications and losses.

Mohd-Assaad N, McDonald BA, Croll D.

Environ Microbiol. 2019 Aug;21(8):2677-2695. doi: 10.1111/1462-2920.14583. Epub 2019 Apr 11.


Potential public health benefits from cat eradications on islands.

de Wit LA, Croll DA, Tershy B, Correa D, Luna-Pasten H, Quadri P, Kilpatrick AM.

PLoS Negl Trop Dis. 2019 Feb 14;13(2):e0007040. doi: 10.1371/journal.pntd.0007040. eCollection 2019 Feb.


Rapid Parallel Evolution of Azole Fungicide Resistance in Australian Populations of the Wheat Pathogen Zymoseptoria tritici.

McDonald MC, Renkin M, Spackman M, Orchard B, Croll D, Solomon PS, Milgate A.

Appl Environ Microbiol. 2019 Feb 6;85(4). pii: e01908-18. doi: 10.1128/AEM.01908-18. Print 2019 Feb 15.


The Monothiol Glutaredoxin Grx4 Regulates Iron Homeostasis and Virulence in Cryptococcus neoformans.

Attarian R, Hu G, Sánchez-León E, Caza M, Croll D, Do E, Bach H, Missall T, Lodge J, Jung WH, Kronstad JW.

mBio. 2018 Dec 4;9(6). pii: e02377-18. doi: 10.1128/mBio.02377-18. Erratum in: mBio. 2019 Apr 30;10(2):.


Cautionary Notes on Use of the MoT3 Diagnostic Assay for Magnaporthe oryzae Wheat and Rice Blast Isolates.

Gupta DR, Avila CSR, Win J, Soanes DM, Ryder LS, Croll D, Bhattacharjee P, Hossain MS, Mahmud NU, Mehebub MS, Surovy MZ, Rahman MM, Talbot NJ, Kamoun S, Islam MT.

Phytopathology. 2019 Apr;109(4):504-508. doi: 10.1094/PHYTO-06-18-0199-LE. Epub 2019 Mar 4.


Wheat blast: from its origins in South America to its emergence as a global threat.

Ceresini PC, Castroagudín VL, Rodrigues FÁ, Rios JA, Aucique-Pérez CE, Moreira SI, Croll D, Alves E, de Carvalho G, Maciel JLN, McDonald BA.

Mol Plant Pathol. 2019 Feb;20(2):155-172. doi: 10.1111/mpp.12747. Epub 2018 Oct 24. Review.


Impact of after-hours telemedicine on hospitalizations in a skilled nursing facility.

Chess D, Whitman JJ, Croll D, Stefanacci R.

Am J Manag Care. 2018 Aug;24(8):385-388.


Invasive rat eradication strongly impacts plant recruitment on a tropical atoll.

Wolf CA, Young HS, Zilliacus KM, Wegmann AS, McKown M, Holmes ND, Tershy BR, Dirzo R, Kropidlowski S, Croll DA.

PLoS One. 2018 Jul 17;13(7):e0200743. doi: 10.1371/journal.pone.0200743. eCollection 2018.


Transposable element insertions shape gene regulation and melanin production in a fungal pathogen of wheat.

Krishnan P, Meile L, Plissonneau C, Ma X, Hartmann FE, Croll D, McDonald BA, Sánchez-Vallet A.

BMC Biol. 2018 Jul 16;16(1):78. doi: 10.1186/s12915-018-0543-2.


Wheat Blast: Past, Present, and Future.

Ceresini PC, Castroagudín VL, Rodrigues FÁ, Rios JA, Eduardo Aucique-Pérez C, Moreira SI, Alves E, Croll D, Maciel JLN.

Annu Rev Phytopathol. 2018 Aug 25;56:427-456. doi: 10.1146/annurev-phyto-080417-050036. Epub 2018 Jul 5. Review.


Meiosis Leads to Pervasive Copy-Number Variation and Distorted Inheritance of Accessory Chromosomes of the Wheat Pathogen Zymoseptoria tritici.

Fouché S, Plissonneau C, McDonald BA, Croll D.

Genome Biol Evol. 2018 Jun 1;10(6):1416-1429. doi: 10.1093/gbe/evy100.


The Genome Biology of Effector Gene Evolution in Filamentous Plant Pathogens.

Sánchez-Vallet A, Fouché S, Fudal I, Hartmann FE, Soyer JL, Tellier A, Croll D.

Annu Rev Phytopathol. 2018 Aug 25;56:21-40. doi: 10.1146/annurev-phyto-080516-035303. Epub 2018 May 16. Review.


Genome-wide evidence for divergent selection between populations of a major agricultural pathogen.

Hartmann FE, McDonald BA, Croll D.

Mol Ecol. 2018 Jun;27(12):2725-2741. doi: 10.1111/mec.14711. Epub 2018 May 23.


Genome-Wide Detection of Genes Under Positive Selection in Worldwide Populations of the Barley Scald Pathogen.

Mohd-Assaad N, McDonald BA, Croll D.

Genome Biol Evol. 2018 Apr 1;10(5):1315-1332. doi: 10.1093/gbe/evy087.


A fungal avirulence factor encoded in a highly plastic genomic region triggers partial resistance to septoria tritici blotch.

Meile L, Croll D, Brunner PC, Plissonneau C, Hartmann FE, McDonald BA, Sánchez-Vallet A.

New Phytol. 2018 Aug;219(3):1048-1061. doi: 10.1111/nph.15180. Epub 2018 Apr 25.


Comparative Genomics of Smut Pathogens: Insights From Orphans and Positively Selected Genes Into Host Specialization.

Benevenuto J, Teixeira-Silva NS, Kuramae EE, Croll D, Monteiro-Vitorello CB.

Front Microbiol. 2018 Apr 6;9:660. doi: 10.3389/fmicb.2018.00660. eCollection 2018.


Genomewide signatures of selection in Epichloë reveal candidate genes for host specialization.

Schirrmann MK, Zoller S, Croll D, Stukenbrock EH, Leuchtmann A, Fior S.

Mol Ecol. 2018 Aug;27(15):3070-3086. doi: 10.1111/mec.14585. Epub 2018 Apr 27.


The birth and death of effectors in rapidly evolving filamentous pathogen genomes.

Fouché S, Plissonneau C, Croll D.

Curr Opin Microbiol. 2018 Dec;46:34-42. doi: 10.1016/j.mib.2018.01.020. Epub 2018 Feb 22. Review.


Population genomics analyses of European ibex species show lower diversity and higher inbreeding in reintroduced populations.

Grossen C, Biebach I, Angelone-Alasaad S, Keller LF, Croll D.

Evol Appl. 2017 Oct 27;11(2):123-139. doi: 10.1111/eva.12490. eCollection 2018 Feb.


Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome.

Plissonneau C, Hartmann FE, Croll D.

BMC Biol. 2018 Jan 11;16(1):5. doi: 10.1186/s12915-017-0457-4.


Acetate provokes mitochondrial stress and cell death in Ustilago maydis.

Kretschmer M, Lambie S, Croll D, Kronstad JW.

Mol Microbiol. 2018 Feb;107(4):488-507. doi: 10.1111/mmi.13894. Epub 2018 Jan 3.


Nature's genetic screens: using genome-wide association studies for effector discovery.

Sánchez-Vallet A, Hartmann FE, Marcel TC, Croll D.

Mol Plant Pathol. 2018 Jan;19(1):3-6. doi: 10.1111/mpp.12592. No abstract available.


Resource partitioning facilitates coexistence in sympatric cetaceans in the California Current.

Fossette S, Abrahms B, Hazen EL, Bograd SJ, Zilliacus KM, Calambokidis J, Burrows JA, Goldbogen JA, Harvey JT, Marinovic B, Tershy B, Croll DA.

Ecol Evol. 2017 Sep 27;7(21):9085-9097. doi: 10.1002/ece3.3409. eCollection 2017 Nov.


Globally threatened vertebrates on islands with invasive species.

Spatz DR, Zilliacus KM, Holmes ND, Butchart SHM, Genovesi P, Ceballos G, Tershy BR, Croll DA.

Sci Adv. 2017 Oct 25;3(10):e1603080. doi: 10.1126/sciadv.1603080. eCollection 2017 Oct.


Distinct Trajectories of Massive Recent Gene Gains and Losses in Populations of a Microbial Eukaryotic Pathogen.

Hartmann FE, Croll D.

Mol Biol Evol. 2017 Nov 1;34(11):2808-2822. doi: 10.1093/molbev/msx208.


High-density genetic mapping identifies the genetic basis of a natural colony morphology mutant in the root rot pathogen Armillaria ostoyae.

Heinzelmann R, Croll D, Zoller S, Sipos G, Münsterkötter M, Güldener U, Rigling D.

Fungal Genet Biol. 2017 Nov;108:44-54. doi: 10.1016/j.fgb.2017.08.007. Epub 2017 Aug 30.


Using Population and Comparative Genomics to Understand the Genetic Basis of Effector-Driven Fungal Pathogen Evolution.

Plissonneau C, Benevenuto J, Mohd-Assaad N, Fouché S, Hartmann FE, Croll D.

Front Plant Sci. 2017 Feb 3;8:119. doi: 10.3389/fpls.2017.00119. eCollection 2017. Review.


A small secreted protein in Zymoseptoria tritici is responsible for avirulence on wheat cultivars carrying the Stb6 resistance gene.

Zhong Z, Marcel TC, Hartmann FE, Ma X, Plissonneau C, Zala M, Ducasse A, Confais J, Compain J, Lapalu N, Amselem J, McDonald BA, Croll D, Palma-Guerrero J.

New Phytol. 2017 Apr;214(2):619-631. doi: 10.1111/nph.14434. Epub 2017 Feb 6.


Estimating Burdens of Neglected Tropical Zoonotic Diseases on Islands with Introduced Mammals.

de Wit LA, Croll DA, Tershy B, Newton KM, Spatz DR, Holmes ND, Kilpatrick AM.

Am J Trop Med Hyg. 2017 Mar;96(3):749-757. doi: 10.4269/ajtmh.16-0573. Epub 2017 Apr 6.


Comparative Transcriptome Analyses in Zymoseptoria tritici Reveal Significant Differences in Gene Expression Among Strains During Plant Infection.

Palma-Guerrero J, Ma X, Torriani SF, Zala M, Francisco CS, Hartmann FE, Croll D, McDonald BA.

Mol Plant Microbe Interact. 2017 Mar;30(3):231-244. doi: 10.1094/MPMI-07-16-0146-R. Epub 2017 Mar 29.


A fungal wheat pathogen evolved host specialization by extensive chromosomal rearrangements.

Hartmann FE, Sánchez-Vallet A, McDonald BA, Croll D.

ISME J. 2017 May;11(5):1189-1204. doi: 10.1038/ismej.2016.196. Epub 2017 Jan 24.


Can Evolution Supply What Ecology Demands?

Kokko H, Chaturvedi A, Croll D, Fischer MC, Guillaume F, Karrenberg S, Kerr B, Rolshausen G, Stapley J.

Trends Ecol Evol. 2017 Mar;32(3):187-197. doi: 10.1016/j.tree.2016.12.005. Epub 2017 Jan 11. Review.


Quantitative trait locus mapping reveals complex genetic architecture of quantitative virulence in the wheat pathogen Zymoseptoria tritici.

Stewart EL, Croll D, Lendenmann MH, Sanchez-Vallet A, Hartmann FE, Palma-Guerrero J, Ma X, McDonald BA.

Mol Plant Pathol. 2018 Jan;19(1):201-216. doi: 10.1111/mpp.12515. Epub 2017 Feb 5.


Multilocus resistance evolution to azole fungicides in fungal plant pathogen populations.

Mohd-Assaad N, McDonald BA, Croll D.

Mol Ecol. 2016 Dec;25(24):6124-6142. doi: 10.1111/mec.13916. Epub 2016 Nov 30.


The Evolution of Orphan Regions in Genomes of a Fungal Pathogen of Wheat.

Plissonneau C, Stürchler A, Croll D.

mBio. 2016 Oct 18;7(5). pii: e01231-16. doi: 10.1128/mBio.01231-16.


The genetic basis of local adaptation for pathogenic fungi in agricultural ecosystems.

Croll D, McDonald BA.

Mol Ecol. 2017 Apr;26(7):2027-2040. doi: 10.1111/mec.13870. Epub 2016 Oct 24. Review.


What the population genetic structures of host and pathogen tell us about disease evolution.

Croll D, Laine AL.

New Phytol. 2016 Nov;212(3):537-539. doi: 10.1111/nph.14203. No abstract available.


Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae.

Islam MT, Croll D, Gladieux P, Soanes DM, Persoons A, Bhattacharjee P, Hossain MS, Gupta DR, Rahman MM, Mahboob MG, Cook N, Salam MU, Surovy MZ, Sancho VB, Maciel JL, NhaniJúnior A, Castroagudín VL, Reges JT, Ceresini PC, Ravel S, Kellner R, Fournier E, Tharreau D, Lebrun MH, McDonald BA, Stitt T, Swan D, Talbot NJ, Saunders DG, Win J, Kamoun S.

BMC Biol. 2016 Oct 3;14(1):84.


Evolution in the absence of sex: Ideas revisited in the post-genomics age (retrospective on DOI 10.1002/bies.201300155).

Croll D.

Bioessays. 2016 Dec;38(12):1191. doi: 10.1002/bies.201600195. Epub 2016 Sep 19. No abstract available.


Maize susceptibility to Ustilago maydis is influenced by genetic and chemical perturbation of carbohydrate allocation.

Kretschmer M, Croll D, Kronstad JW.

Mol Plant Pathol. 2017 Dec;18(9):1222-1237. doi: 10.1111/mpp.12486. Epub 2016 Nov 14.


Chloroplast-associated metabolic functions influence the susceptibility of maize to Ustilago maydis.

Kretschmer M, Croll D, Kronstad JW.

Mol Plant Pathol. 2017 Dec;18(9):1210-1221. doi: 10.1111/mpp.12485. Epub 2016 Nov 14.


Past and estimated future impact of invasive alien mammals on insular threatened vertebrate populations.

McCreless EE, Huff DD, Croll DA, Tershy BR, Spatz DR, Holmes ND, Butchart SH, Wilcox C.

Nat Commun. 2016 Aug 18;7:12488. doi: 10.1038/ncomms12488.


Strong reproductive isolation and narrow genomic tracts of differentiation among three woodpecker species in secondary contact.

Grossen C, Seneviratne SS, Croll D, Irwin DE.

Mol Ecol. 2016 Sep;25(17):4247-66. doi: 10.1111/mec.13751. Epub 2016 Aug 26.


Invasive mammal eradication on islands results in substantial conservation gains.

Jones HP, Holmes ND, Butchart SH, Tershy BR, Kappes PJ, Corkery I, Aguirre-Muñoz A, Armstrong DP, Bonnaud E, Burbidge AA, Campbell K, Courchamp F, Cowan PE, Cuthbert RJ, Ebbert S, Genovesi P, Howald GR, Keitt BS, Kress SW, Miskelly CM, Oppel S, Poncet S, Rauzon MJ, Rocamora G, Russell JC, Samaniego-Herrera A, Seddon PJ, Spatz DR, Towns DR, Croll DA.

Proc Natl Acad Sci U S A. 2016 Apr 12;113(15):4033-8. doi: 10.1073/pnas.1521179113. Epub 2016 Mar 21.

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