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Items: 37


Seeking to improve feed efficiency in pigs through microbial modulation via fecal microbiota transplantation in sows and dietary supplementation of offspring with inulin.

McCormack UM, Curião T, Metzler-Zebeli BU, Wilkinson T, Reyer H, Crispie F, Cotter PD, Creevey CJ, Gardiner GE, Lawlor PG.

Appl Environ Microbiol. 2019 Sep 13. pii: AEM.01255-19. doi: 10.1128/AEM.01255-19. [Epub ahead of print]


Porcine Feed Efficiency-Associated Intestinal Microbiota and Physiological Traits: Finding Consistent Cross-Locational Biomarkers for Residual Feed Intake.

McCormack UM, Curião T, Metzler-Zebeli BU, Magowan E, Berry DP, Reyer H, Prieto ML, Buzoianu SG, Harrison M, Rebeiz N, Crispie F, Cotter PD, O'Sullivan O, Gardiner GE, Lawlor PG.

mSystems. 2019 Jun 18;4(4). pii: e00324-18. doi: 10.1128/mSystems.00324-18.


Influence of the Intestinal Microbiota on Colonization Resistance to Salmonella and the Shedding Pattern of Naturally Exposed Pigs.

Argüello H, Estellé J, Leonard FC, Crispie F, Cotter PD, O'Sullivan O, Lynch H, Walia K, Duffy G, Lawlor PG, Gardiner GE.

mSystems. 2019 Apr 23;4(2). pii: e00021-19. doi: 10.1128/mSystems.00021-19. eCollection 2019 Mar-Apr.


Removal of adult cyathostomins alters faecal microbiota and promotes an inflammatory phenotype in horses.

Walshe N, Duggan V, Cabrera-Rubio R, Crispie F, Cotter P, Feehan O, Mulcahy G.

Int J Parasitol. 2019 May;49(6):489-500. doi: 10.1016/j.ijpara.2019.02.003. Epub 2019 Apr 12.


The dynamics of the antibiotic resistome in the feces of freshly weaned pigs following therapeutic administration of oxytetracycline.

Ghanbari M, Klose V, Crispie F, Cotter PD.

Sci Rep. 2019 Mar 11;9(1):4062. doi: 10.1038/s41598-019-40496-8.


The rumen microbiome: a crucial consideration when optimising milk and meat production and nitrogen utilisation efficiency.

Matthews C, Crispie F, Lewis E, Reid M, O'Toole PW, Cotter PD.

Gut Microbes. 2019;10(2):115-132. doi: 10.1080/19490976.2018.1505176. Epub 2018 Sep 12. Review.


A Diverse Range of Human Gut Bacteria Have the Potential To Metabolize the Dietary Component Gallic Acid.

Esteban-Torres M, Santamaría L, Cabrera-Rubio R, Plaza-Vinuesa L, Crispie F, de Las Rivas B, Cotter P, Muñoz R.

Appl Environ Microbiol. 2018 Sep 17;84(19). pii: e01558-18. doi: 10.1128/AEM.01558-18. Print 2018 Oct 1.


Oral Delivery of Nisin in Resistant Starch Based Matrices Alters the Gut Microbiota in Mice.

Gough R, Cabrera Rubio R, O'Connor PM, Crispie F, Brodkorb A, Miao S, Hill C, Ross RP, Cotter PD, Nilaweera KN, Rea MC.

Front Microbiol. 2018 Jun 15;9:1186. doi: 10.3389/fmicb.2018.01186. eCollection 2018.


Early Salmonella Typhimurium infection in pigs disrupts Microbiome composition and functionality principally at the ileum mucosa.

Argüello H, Estellé J, Zaldívar-López S, Jiménez-Marín Á, Carvajal A, López-Bascón MA, Crispie F, O'Sullivan O, Cotter PD, Priego-Capote F, Morera L, Garrido JJ.

Sci Rep. 2018 May 17;8(1):7788. doi: 10.1038/s41598-018-26083-3.


Fecal Microbiota Transplantation in Gestating Sows and Neonatal Offspring Alters Lifetime Intestinal Microbiota and Growth in Offspring.

McCormack UM, Curião T, Wilkinson T, Metzler-Zebeli BU, Reyer H, Ryan T, Calderon-Diaz JA, Crispie F, Cotter PD, Creevey CJ, Gardiner GE, Lawlor PG.

mSystems. 2018 Mar 13;3(3). pii: e00134-17. doi: 10.1128/mSystems.00134-17. eCollection 2018 May-Jun.


Species classifier choice is a key consideration when analysing low-complexity food microbiome data.

Walsh AM, Crispie F, O'Sullivan O, Finnegan L, Claesson MJ, Cotter PD.

Microbiome. 2018 Mar 20;6(1):50. doi: 10.1186/s40168-018-0437-0.


Omics-Based Insights into Flavor Development and Microbial Succession within Surface-Ripened Cheese.

Bertuzzi AS, Walsh AM, Sheehan JJ, Cotter PD, Crispie F, McSweeney PLH, Kilcawley KN, Rea MC.

mSystems. 2018 Jan 30;3(1). pii: e00211-17. doi: 10.1128/mSystems.00211-17. eCollection 2018 Jan-Feb.


Post-weaning social isolation of rats leads to long-term disruption of the gut microbiota-immune-brain axis.

Dunphy-Doherty F, O'Mahony SM, Peterson VL, O'Sullivan O, Crispie F, Cotter PD, Wigmore P, King MV, Cryan JF, Fone KCF.

Brain Behav Immun. 2018 Feb;68:261-273. doi: 10.1016/j.bbi.2017.10.024. Epub 2017 Nov 6.


Strain-Level Metagenomic Analysis of the Fermented Dairy Beverage Nunu Highlights Potential Food Safety Risks.

Walsh AM, Crispie F, Daari K, O'Sullivan O, Martin JC, Arthur CT, Claesson MJ, Scott KP, Cotter PD.

Appl Environ Microbiol. 2017 Aug 1;83(16). pii: e01144-17. doi: 10.1128/AEM.01144-17. Print 2017 Aug 15.


Exploring a Possible Link between the Intestinal Microbiota and Feed Efficiency in Pigs.

McCormack UM, Curião T, Buzoianu SG, Prieto ML, Ryan T, Varley P, Crispie F, Magowan E, Metzler-Zebeli BU, Berry D, O'Sullivan O, Cotter PD, Gardiner GE, Lawlor PG.

Appl Environ Microbiol. 2017 Jul 17;83(15). pii: e00380-17. doi: 10.1128/AEM.00380-17. Print 2017 Aug 1.


Genome Sequence of Staphylococcus saprophyticus DPC5671, a Strain Isolated from Cheddar Cheese.

Bertuzzi AS, Guinane CM, Crispie F, Kilcawley KN, McSweeney PLH, Rea MC.

Genome Announc. 2017 Apr 20;5(16). pii: e00193-17. doi: 10.1128/genomeA.00193-17.


Whey protein effects on energy balance link the intestinal mechanisms of energy absorption with adiposity and hypothalamic neuropeptide gene expression.

Nilaweera KN, Cabrera-Rubio R, Speakman JR, O'Connor PM, McAuliffe A, Guinane CM, Lawton EM, Crispie F, Aguilera M, Stanley M, Boscaini S, Joyce S, Melgar S, Cryan JF, Cotter PD.

Am J Physiol Endocrinol Metab. 2017 Jul 1;313(1):E1-E11. doi: 10.1152/ajpendo.00356.2016. Epub 2017 Mar 21.


Correction for Walsh et al., Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir.

Walsh AM, Crispie F, Kilcawley K, O'Sullivan O, O'Sullivan MG, Claesson MJ, Cotter PD.

mSystems. 2017 Feb 21;2(1). pii: e00003-17. doi: 10.1128/mSystems.00003-17. eCollection 2017 Jan-Feb.


Drunk bugs: Chronic vapour alcohol exposure induces marked changes in the gut microbiome in mice.

Peterson VL, Jury NJ, Cabrera-Rubio R, Draper LA, Crispie F, Cotter PD, Dinan TG, Holmes A, Cryan JF.

Behav Brain Res. 2017 Apr 14;323:172-176. doi: 10.1016/j.bbr.2017.01.049. Epub 2017 Feb 1.


Translating Omics to Food Microbiology.

Walsh AM, Crispie F, Claesson MJ, Cotter PD.

Annu Rev Food Sci Technol. 2017 Feb 28;8:113-134. doi: 10.1146/annurev-food-030216-025729. Epub 2017 Jan 11. Review.


Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir.

Walsh AM, Crispie F, Kilcawley K, O'Sullivan O, O'Sullivan MG, Claesson MJ, Cotter PD.

mSystems. 2016 Oct 4;1(5). pii: e00052-16. eCollection 2016 Sep-Oct. Erratum in: mSystems. 2017 Feb 21;2(1):.


A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding.

Vartia S, Villanueva-Cañas JL, Finarelli J, Farrell ED, Collins PC, Hughes GM, Carlsson JE, Gauthier DT, McGinnity P, Cross TF, FitzGerald RD, Mirimin L, Crispie F, Cotter PD, Carlsson J.

R Soc Open Sci. 2016 Jan 20;3(1):150565. doi: 10.1098/rsos.150565. eCollection 2016 Jan.


Correction: N-3 Polyunsaturated Fatty Acids (PUFAs) Reverse the Impact of Early-Life Stress on the Gut Microbiota.

Pusceddu MM, El Aidy S, Crispie F, O'Sullivan O, Cotter P, Stanton C, Kelly P, Cryan JF, Dinan TG.

PLoS One. 2015 Oct 30;10(10):e0142228. doi: 10.1371/journal.pone.0142228. eCollection 2015. No abstract available.


N-3 Polyunsaturated Fatty Acids (PUFAs) Reverse the Impact of Early-Life Stress on the Gut Microbiota.

Pusceddu MM, El Aidy S, Crispie F, O'Sullivan O, Cotter P, Stanton C, Kelly P, Cryan JF, Dinan TG.

PLoS One. 2015 Oct 1;10(10):e0139721. doi: 10.1371/journal.pone.0139721. eCollection 2015. Erratum in: PLoS One. 2015;10(10):e0142228.


Prenatal stress-induced alterations in major physiological systems correlate with gut microbiota composition in adulthood.

Golubeva AV, Crampton S, Desbonnet L, Edge D, O'Sullivan O, Lomasney KW, Zhdanov AV, Crispie F, Moloney RD, Borre YE, Cotter PD, Hyland NP, O'Halloran KD, Dinan TG, O'Keeffe GW, Cryan JF.

Psychoneuroendocrinology. 2015 Oct;60:58-74. doi: 10.1016/j.psyneuen.2015.06.002. Epub 2015 Jun 17.


Gut microbiota depletion from early adolescence in mice: Implications for brain and behaviour.

Desbonnet L, Clarke G, Traplin A, O'Sullivan O, Crispie F, Moloney RD, Cotter PD, Dinan TG, Cryan JF.

Brain Behav Immun. 2015 Aug;48:165-73. doi: 10.1016/j.bbi.2015.04.004. Epub 2015 Apr 10.


Antipsychotics and the gut microbiome: olanzapine-induced metabolic dysfunction is attenuated by antibiotic administration in the rat.

Davey KJ, Cotter PD, O'Sullivan O, Crispie F, Dinan TG, Cryan JF, O'Mahony SM.

Transl Psychiatry. 2013 Oct 1;3:e309. doi: 10.1038/tp.2013.83.


The effect of feeding Bt MON810 maize to pigs for 110 days on intestinal microbiota.

Buzoianu SG, Walsh MC, Rea MC, O'Sullivan O, Crispie F, Cotter PD, Ross RP, Gardiner GE, Lawlor PG.

PLoS One. 2012;7(5):e33668. doi: 10.1371/journal.pone.0033668. Epub 2012 May 4.


Fate and efficacy of lacticin 3147-producing Lactococcus lactis in the mammalian gastrointestinal tract.

Dobson A, Crispie F, Rea MC, O'Sullivan O, Casey PG, Lawlor PG, Cotter PD, Ross P, Gardiner GE, Hill C.

FEMS Microbiol Ecol. 2011 Jun;76(3):602-14. doi: 10.1111/j.1574-6941.2011.01069.x. Epub 2011 Mar 7.


Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon.

Rea MC, Dobson A, O'Sullivan O, Crispie F, Fouhy F, Cotter PD, Shanahan F, Kiely B, Hill C, Ross RP.

Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4639-44. doi: 10.1073/pnas.1001224107. Epub 2010 Jun 29.


Efficacy of a teat dip containing the bacteriocin lacticin 3147 to eliminate Gram-positive pathogens associated with bovine mastitis.

Klostermann K, Crispie F, Flynn J, Meaney WJ, Paul Ross R, Hill C.

J Dairy Res. 2010 May;77(2):231-8. doi: 10.1017/S0022029909990239. Epub 2009 Sep 29.


Intramammary infusion of a live culture for treatment of bovine mastitis: effect of live lactococci on the mammary immune response.

Crispie F, Alonso-Gómez M, O'Loughlin C, Klostermann K, Flynn J, Arkins S, Meaney W, Paul Ross R, Hill C.

J Dairy Res. 2008 Aug;75(3):374-84. doi: 10.1017/S0022029908003385.


Intramammary infusion of a live culture of Lactococcus lactis for treatment of bovine mastitis: comparison with antibiotic treatment in field trials.

Klostermann K, Crispie F, Flynn J, Ross RP, Hill C, Meaney W.

J Dairy Res. 2008 Aug;75(3):365-73. doi: 10.1017/S0022029908003373.


Dry cow therapy with a non-antibiotic intramammary teat seal - a review.

Crispie F, Flynn J, Ross RP, Hill C, Meaney WJ.

Ir Vet J. 2004 Jul 1;57(7):412-8. doi: 10.1186/2046-0481-57-7-412.


Update on the development of a novel dry cow therapy using a bismuth-based intramammary teat seal in combination with the bacteriocin lacticin 3147.

Crispie F, Flynn J, Ross RP, Hill C, Meaney WJ.

Ir Vet J. 2004 Nov 1;57(11):652-6. doi: 10.1186/2046-0481-57-11-652.


Identification of a phosphofructokinase-encoding gene from Streptococcus thermophilus CNRZ1205--a novel link between carbon metabolism and gene regulation?

Crispie F, Anba J, Renault P, Ehrlich D, Fitzgerald G, van Sinderen D.

Mol Genet Genomics. 2002 Dec;268(4):500-9. Epub 2002 Oct 17.


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