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Items: 1 to 50 of 295

1.

David W. Krogmann, 1931-2016.

Brand JJ, Kerfeld CA, Cramer WA, Govindjee.

Photosynth Res. 2017 Apr;132(1):1-12. doi: 10.1007/s11120-016-0335-x. Epub 2017 Feb 2.

PMID:
28155215
2.

Metastable radical state, nonreactive with oxygen, is inherent to catalysis by respiratory and photosynthetic cytochromes bc1/b6f.

Sarewicz M, Bujnowicz Ł, Bhaduri S, Singh SK, Cramer WA, Osyczka A.

Proc Natl Acad Sci U S A. 2017 Feb 7;114(6):1323-1328. doi: 10.1073/pnas.1618840114. Epub 2017 Jan 23.

3.

Pathways of Transmembrane Electron Transfer in Cytochrome bc Complexes: Dielectric Heterogeneity and Interheme Coulombic Interactions.

Bhaduri S, Stadnytskyi V, Zakharov SD, Hasan SS, Bujnowicz Ł, Sarewicz M, Savikhin S, Osyczka A, Cramer WA.

J Phys Chem B. 2017 Feb 9;121(5):975-983. doi: 10.1021/acs.jpcb.6b11709. Epub 2017 Jan 25.

PMID:
28032998
4.

Climate change: The 2015 Paris Agreement thresholds and Mediterranean basin ecosystems.

Guiot J, Cramer W.

Science. 2016 Oct 28;354(6311):465-468. Epub 2016 Oct 27.

PMID:
27789841
5.

Structural insight into the role of the Ton complex in energy transduction.

Celia H, Noinaj N, Zakharov SD, Bordignon E, Botos I, Santamaria M, Barnard TJ, Cramer WA, Lloubes R, Buchanan SK.

Nature. 2016 Oct 6;538(7623):60-65. doi: 10.1038/nature19757. Epub 2016 Sep 21.

6.

Trans-membrane Signaling in Photosynthetic State Transitions: REDOX- AND STRUCTURE-DEPENDENT INTERACTION IN VITRO BETWEEN STT7 KINASE AND THE CYTOCHROME b6f COMPLEX.

Singh SK, Hasan SS, Zakharov SD, Naurin S, Cohn W, Ma J, Whitelegge JP, Cramer WA.

J Biol Chem. 2016 Oct 7;291(41):21740-21750. Epub 2016 Aug 18.

7.

The Colicin E1 TolC-Binding Conformer: Pillar or Pore Function of TolC in Colicin Import?

Zakharov SD, Wang XS, Cramer WA.

Biochemistry. 2016 Sep 13;55(36):5084-94. doi: 10.1021/acs.biochem.6b00621. Epub 2016 Aug 29.

8.

Photo-induced oxidation of the uniquely liganded heme f in the cytochrome b6f complex of oxygenic photosynthesis.

Chauvet AA, Agarwal R, Haddad AA, van Mourik F, Cramer WA.

Phys Chem Chem Phys. 2016 May 14;18(18):12983-91. doi: 10.1039/c6cp01592a. Epub 2016 Apr 25.

9.

Biodiversity scenarios neglect future land-use changes.

Titeux N, Henle K, Mihoub JB, Regos A, Geijzendorffer IR, Cramer W, Verburg PH, Brotons L.

Glob Chang Biol. 2016 Jul;22(7):2505-15. doi: 10.1111/gcb.13272. Epub 2016 Mar 31.

PMID:
26950650
10.

Note: Small anaerobic chamber for optical spectroscopy.

Chauvet AA, Agarwal R, Cramer WA, Chergui M.

Rev Sci Instrum. 2015 Oct;86(10):106101. doi: 10.1063/1.4932183.

11.

Role of domain swapping in the hetero-oligomeric cytochrome b6f lipoprotein complex.

Agarwal R, Hasan SS, Jones LM, Stofleth JT, Ryan CM, Whitelegge JP, Kehoe DM, Cramer WA.

Biochemistry. 2015 May 26;54(20):3151-63. doi: 10.1021/acs.biochem.5b00279. Epub 2015 May 12.

12.

Effects of climate extremes on the terrestrial carbon cycle: concepts, processes and potential future impacts.

Frank D, Reichstein M, Bahn M, Thonicke K, Frank D, Mahecha MD, Smith P, van der Velde M, Vicca S, Babst F, Beer C, Buchmann N, Canadell JG, Ciais P, Cramer W, Ibrom A, Miglietta F, Poulter B, Rammig A, Seneviratne SI, Walz A, Wattenbach M, Zavala MA, Zscheischler J.

Glob Chang Biol. 2015 Aug;21(8):2861-80. doi: 10.1111/gcb.12916. Epub 2015 May 12. Review.

13.

Traffic within the cytochrome b6f lipoprotein complex: gating of the quinone portal.

Hasan SS, Proctor EA, Yamashita E, Dokholyan NV, Cramer WA.

Biophys J. 2014 Oct 7;107(7):1620-8. doi: 10.1016/j.bpj.2014.08.003.

14.

Structure-function of cyanobacterial outer-membrane protein, Slr1270: homolog of Escherichia coli drug export/colicin import protein, TolC.

Agarwal R, Zakharov S, Hasan SS, Ryan CM, Whitelegge JP, Cramer WA.

FEBS Lett. 2014 Nov 3;588(21):3793-801. doi: 10.1016/j.febslet.2014.08.028. Epub 2014 Sep 13.

15.

State-based surveillance for selected hemoglobinopathies.

Hulihan MM, Feuchtbaum L, Jordan L, Kirby RS, Snyder A, Young W, Greene Y, Telfair J, Wang Y, Cramer W, Werner EM, Kenney K, Creary M, Grant AM.

Genet Med. 2015 Feb;17(2):125-30. doi: 10.1038/gim.2014.81. Epub 2014 Jul 3.

16.

Internal lipid architecture of the hetero-oligomeric cytochrome b6f complex.

Hasan SS, Cramer WA.

Structure. 2014 Jul 8;22(7):1008-15. doi: 10.1016/j.str.2014.05.004. Epub 2014 Jun 12.

17.

A map of dielectric heterogeneity in a membrane protein: the hetero-oligomeric cytochrome b6f complex.

Hasan SS, Zakharov SD, Chauvet A, Stadnytskyi V, Savikhin S, Cramer WA.

J Phys Chem B. 2014 Jun 19;118(24):6614-25. doi: 10.1021/jp501165k. Epub 2014 Jun 11.

18.

Methods for studying interactions of detergents and lipids with α-helical and β-barrel integral membrane proteins.

Hasan SS, Baniulis D, Yamashita E, Zhalnina MV, Zakharov SD, Stofleth JT, Cramer WA.

Curr Protoc Protein Sci. 2013 Nov 5;74:Unit 29.7.. doi: 10.1002/0471140864.ps2907s74.

19.

Mechanism of enhanced superoxide production in the cytochrome b(6)f complex of oxygenic photosynthesis.

Baniulis D, Hasan SS, Stofleth JT, Cramer WA.

Biochemistry. 2013 Dec 17;52(50):8975-83. doi: 10.1021/bi4013534. Epub 2013 Dec 6.

20.

Lipid-induced conformational changes within the cytochrome b6f complex of oxygenic photosynthesis.

Hasan SS, Stofleth JT, Yamashita E, Cramer WA.

Biochemistry. 2013 Apr 16;52(15):2649-54. doi: 10.1021/bi301638h. Epub 2013 Apr 5.

21.

Transmembrane signaling and assembly of the cytochrome b6f-lipidic charge transfer complex.

Saif Hasan S, Yamashita E, Cramer WA.

Biochim Biophys Acta. 2013 Nov-Dec;1827(11-12):1295-308. doi: 10.1016/j.bbabio.2013.03.002. Epub 2013 Mar 16. Review.

22.

Quinone-dependent proton transfer pathways in the photosynthetic cytochrome b6f complex.

Hasan SS, Yamashita E, Baniulis D, Cramer WA.

Proc Natl Acad Sci U S A. 2013 Mar 12;110(11):4297-302. doi: 10.1073/pnas.1222248110. Epub 2013 Feb 25.

23.

Pathways of colicin import: utilization of BtuB, OmpF porin and the TolC drug-export protein.

Zakharov SD, Sharma O, Zhalnina M, Yamashita E, Cramer WA.

Biochem Soc Trans. 2012 Dec 1;40(6):1463-8. doi: 10.1042/BST20120211.

PMID:
23176499
24.

Lipid functions in cytochrome bc complexes: an odd evolutionary transition in a membrane protein structure.

Hasan SS, Cramer WA.

Philos Trans R Soc Lond B Biol Sci. 2012 Dec 19;367(1608):3406-11. doi: 10.1098/rstb.2012.0058.

25.

Border crossings: colicins and transporters.

Jakes KS, Cramer WA.

Annu Rev Genet. 2012;46:209-31. doi: 10.1146/annurev-genet-110711-155427. Epub 2012 Aug 28. Review.

PMID:
22934645
26.

On rate limitations of electron transfer in the photosynthetic cytochrome b6f complex.

Hasan SS, Cramer WA.

Phys Chem Chem Phys. 2012 Oct 28;14(40):13853-60. Epub 2012 Aug 14.

27.

Biodiversity and ecosystem services science for a sustainable planet: the DIVERSITAS vision for 2012-20.

Larigauderie A, Prieur-Richard AH, Mace GM, Lonsdale M, Mooney HA, Brussaard L, Cooper D, Cramer W, Daszak P, Díaz S, Duraiappah A, Elmqvist T, Faith DP, Jackson LE, Krug C, Leadley PW, Le Prestre P, Matsuda H, Palmer M, Perrings C, Pulleman M, Reyers B, Rosa EA, Scholes RJ, Spehn E, Turner B 2nd, Yahara T.

Curr Opin Environ Sustain. 2012 Feb;4(1):101-105.

28.

Membrane proteins in four acts: function precedes structure determination.

Cramer WA, Zakharov SD, Saif Hasan S, Zhang H, Baniulis D, Zhalnina MV, Soriano GM, Sharma O, Rochet JC, Ryan C, Whitelegge J, Kurisu G, Yamashita E.

Methods. 2011 Dec;55(4):415-20. doi: 10.1016/j.ymeth.2011.11.001. Epub 2011 Nov 10.

29.

Profiling of integral membrane proteins and their post translational modifications using high-resolution mass spectrometry.

Souda P, Ryan CM, Cramer WA, Whitelegge J.

Methods. 2011 Dec;55(4):330-6. doi: 10.1016/j.ymeth.2011.09.019. Epub 2011 Sep 29. Review.

30.

Conservation of lipid functions in cytochrome bc complexes.

Hasan SS, Yamashita E, Ryan CM, Whitelegge JP, Cramer WA.

J Mol Biol. 2011 Nov 18;414(1):145-62. doi: 10.1016/j.jmb.2011.09.023. Epub 2011 Sep 28.

31.

Analysis of the colorimetric properties of goniochromatic colors using the MacAdam limits under different light sources.

Perales E, Chorro E, Cramer WR, Martínez-Verdú FM.

Appl Opt. 2011 Sep 20;50(27):5271-8. doi: 10.1364/AO.50.005271.

PMID:
21947045
32.

Climate change risks for African agriculture.

Müller C, Cramer W, Hare WL, Lotze-Campen H.

Proc Natl Acad Sci U S A. 2011 Mar 15;108(11):4313-5. doi: 10.1073/pnas.1015078108. Epub 2011 Feb 28.

33.

The Q cycle of cytochrome bc complexes: a structure perspective.

Cramer WA, Hasan SS, Yamashita E.

Biochim Biophys Acta. 2011 Jul;1807(7):788-802. doi: 10.1016/j.bbabio.2011.02.006. Epub 2011 Feb 23. Review.

34.

NdhP and NdhQ: two novel small subunits of the cyanobacterial NDH-1 complex.

Nowaczyk MM, Wulfhorst H, Ryan CM, Souda P, Zhang H, Cramer WA, Whitelegge JP.

Biochemistry. 2011 Feb 22;50(7):1121-4. doi: 10.1021/bi102044b. Epub 2011 Jan 27.

35.

Mobility of BtuB and OmpF in the Escherichia coli outer membrane: implications for dynamic formation of a translocon complex.

Spector J, Zakharov S, Lill Y, Sharma O, Cramer WA, Ritchie K.

Biophys J. 2010 Dec 15;99(12):3880-6. doi: 10.1016/j.bpj.2010.10.029.

36.

Purification and crystallization of the cyanobacterial cytochrome b6f complex.

Baniulis D, Zhang H, Zakharova T, Hasan SS, Cramer WA.

Methods Mol Biol. 2011;684:65-77. doi: 10.1007/978-1-60761-925-3_7.

PMID:
20960122
37.

Development of probability density functions for future South American rainfall.

Jupp TE, Cox PM, Rammig A, Thonicke K, Lucht W, Cramer W.

New Phytol. 2010 Aug;187(3):682-93. doi: 10.1111/j.1469-8137.2010.03368.x.

38.

Estimating the risk of Amazonian forest dieback.

Rammig A, Jupp T, Thonicke K, Tietjen B, Heinke J, Ostberg S, Lucht W, Cramer W, Cox P.

New Phytol. 2010 Aug;187(3):694-706. doi: 10.1111/j.1469-8137.2010.03318.x. Epub 2010 Jun 9.

39.

Post-translational modifications of integral membrane proteins resolved by top-down Fourier transform mass spectrometry with collisionally activated dissociation.

Ryan CM, Souda P, Bassilian S, Ujwal R, Zhang J, Abramson J, Ping P, Durazo A, Bowie JU, Hasan SS, Baniulis D, Cramer WA, Faull KF, Whitelegge JP.

Mol Cell Proteomics. 2010 May;9(5):791-803. doi: 10.1074/mcp.M900516-MCP200. Epub 2010 Jan 21.

40.

EPR detection of an O(2) surrogate bound to heme c(n) of the cytochrome b(6)f complex.

Twigg AI, Baniulis D, Cramer WA, Hendrich MP.

J Am Chem Soc. 2009 Sep 9;131(35):12536-7. doi: 10.1021/ja905171c.

41.

Genome-wide screens: novel mechanisms in colicin import and cytotoxicity.

Sharma O, Datsenko KA, Ess SC, Zhalnina MV, Wanner BL, Cramer WA.

Mol Microbiol. 2009 Aug;73(4):571-85. doi: 10.1111/j.1365-2958.2009.06788.x. Epub 2009 Jul 22.

42.

Structure-Function, Stability, and Chemical Modification of the Cyanobacterial Cytochrome b6f Complex from Nostoc sp. PCC 7120.

Baniulis D, Yamashita E, Whitelegge JP, Zatsman AI, Hendrich MP, Hasan SS, Ryan CM, Cramer WA.

J Biol Chem. 2009 Apr 10;284(15):9861-9. doi: 10.1074/jbc.M809196200. Epub 2009 Feb 2.

43.

Structure-function of the cytochrome b6f complex.

Baniulis D, Yamashita E, Zhang H, Hasan SS, Cramer WA.

Photochem Photobiol. 2008 Nov-Dec;84(6):1349-58. doi: 10.1111/j.1751-1097.2008.00444.x. Review.

PMID:
19067956
44.

Primary events in the colicin translocon: FRET analysis of colicin unfolding initiated by binding to BtuB and OmpF.

Zakharov SD, Sharma O, Zhalnina MV, Cramer WA.

Biochemistry. 2008 Dec 2;47(48):12802-9. doi: 10.1021/bi800865h.

PMID:
18986168
45.

Crystal structures of the OmpF porin: function in a colicin translocon.

Yamashita E, Zhalnina MV, Zakharov SD, Sharma O, Cramer WA.

EMBO J. 2008 Aug 6;27(15):2171-80. doi: 10.1038/emboj.2008.137. Epub 2008 Jul 17.

46.

On the structural role of the aromatic residue environment of the chlorophyll a in the cytochrome b6f complex.

Yan J, Dashdorj N, Baniulis D, Yamashita E, Savikhin S, Cramer WA.

Biochemistry. 2008 Mar 25;47(12):3654-61. doi: 10.1021/bi702299b. Epub 2008 Feb 27.

PMID:
18302324
47.

Ultrafast optical pump-probe studies of the cytochrome b(6)f complex in solution and crystalline states.

Dashdorj N, Yamashita E, Schaibley J, Cramer WA, Savikhin S.

J Phys Chem B. 2007 Dec 27;111(51):14405-10. Epub 2007 Nov 30.

PMID:
18047317
48.

Helical alpha-synuclein forms highly conductive ion channels.

Zakharov SD, Hulleman JD, Dutseva EA, Antonenko YN, Rochet JC, Cramer WA.

Biochemistry. 2007 Dec 18;46(50):14369-79. Epub 2007 Nov 22.

PMID:
18031063
49.

Structure of the complex of the colicin E2 R-domain and its BtuB receptor. The outer membrane colicin translocon.

Sharma O, Yamashita E, Zhalnina MV, Zakharov SD, Datsenko KA, Wanner BL, Cramer WA.

J Biol Chem. 2007 Aug 10;282(32):23163-70. Epub 2007 Jun 4.

50.

Structure of the cytochrome b6f complex: quinone analogue inhibitors as ligands of heme cn.

Yamashita E, Zhang H, Cramer WA.

J Mol Biol. 2007 Jun 29;370(1):39-52. Epub 2007 Apr 12.

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