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Items: 24

1.

Discovery of stroke-related blood biomarkers from gene expression network models.

Theofilatos K, Korfiati A, Mavroudi S, Cowperthwaite MC, Shpak M.

BMC Med Genomics. 2019 Aug 7;12(1):118. doi: 10.1186/s12920-019-0566-8.

2.

Bivalent Chromatin Domains in Glioblastoma Reveal a Subtype-Specific Signature of Glioma Stem Cells.

Hall AW, Battenhouse AM, Shivram H, Morris AR, Cowperthwaite MC, Shpak M, Iyer VR.

Cancer Res. 2018 May 15;78(10):2463-2474. doi: 10.1158/0008-5472.CAN-17-1724. Epub 2018 Mar 16.

3.

One-year outcomes of early-crossover patients in a cohort receiving nonoperative care for lumbar disc herniation.

Ramakrishnan A, Webb KM, Cowperthwaite MC.

J Neurosurg Spine. 2017 Oct;27(4):391-396. doi: 10.3171/2017.2.SPINE16760. Epub 2017 Jul 28.

PMID:
28753064
4.

Molecular Predictors of Long-Term Survival in Glioblastoma Multiforme Patients.

Lu J, Cowperthwaite MC, Burnett MG, Shpak M.

PLoS One. 2016 Apr 28;11(4):e0154313. doi: 10.1371/journal.pone.0154313. eCollection 2016.

5.

Reproducibility of SNV-calling in multiple sequencing runs from single tumors.

Derryberry DZ, Cowperthwaite MC, Wilke CO.

PeerJ. 2016 Jan 4;4:e1508. doi: 10.7717/peerj.1508. eCollection 2016.

6.

Three-dimensional brain magnetic resonance imaging segmentation via knowledge-driven decision theory.

Verma N, Muralidhar GS, Bovik AC, Cowperthwaite MC, Burnett MG, Markey MK.

J Med Imaging (Bellingham). 2014 Oct;1(3):034001. doi: 10.1117/1.JMI.1.3.034001. Epub 2014 Oct 1.

7.

Rapid and convergent evolution in the glioblastoma multiforme genome.

Shpak M, Goldberg MM, Cowperthwaite MC.

Genomics. 2015 Mar;105(3):159-67. doi: 10.1016/j.ygeno.2014.12.010. Epub 2015 Jan 7. Erratum in: Genomics. 2016 Jan;107(1):49.

8.

Effects of genetic variation on the dynamics of neurodegeneration in Alzheimer's disease.

Printy BP, Verma N, Cowperthwaite MC, Markey MK; Alzheimer's Disease Neuroimaging Initiative.

Conf Proc IEEE Eng Med Biol Soc. 2014;2014:2464-7. doi: 10.1109/EMBC.2014.6944121.

PMID:
25570489
9.

Cilia gene expression patterns in cancer.

Shpak M, Goldberg MM, Cowperthwaite MC.

Cancer Genomics Proteomics. 2014 Jan-Feb;11(1):13-24.

PMID:
24633316
10.

An eQTL analysis of the human glioblastoma multiforme genome.

Shpak M, Hall AW, Goldberg MM, Derryberry DZ, Ni Y, Iyer VR, Cowperthwaite MC.

Genomics. 2014 Apr;103(4):252-63. doi: 10.1016/j.ygeno.2014.02.005. Epub 2014 Mar 4.

11.

Superpixels in brain MR image analysis.

Verma N, Cowperthwaite MC, Markey MK.

Conf Proc IEEE Eng Med Biol Soc. 2013;2013:1077-80. doi: 10.1109/EMBC.2013.6609691.

PMID:
24109878
12.

The impact of early recovery on long-term outcomes in a cohort of patients undergoing prolonged nonoperative treatment for lumbar disc herniation: clinical article.

Cowperthwaite MC, van den Hout WB, Webb KM.

J Neurosurg Spine. 2013 Sep;19(3):301-6. doi: 10.3171/2013.5.SPINE12992. Epub 2013 Jun 28.

PMID:
23808581
13.

Variational level set approach for automatic correction of multiplicative and additive intensity inhomogeneities in brain MR Images.

Verma N, Cowperthwaite MC, Markey MK.

Conf Proc IEEE Eng Med Biol Soc. 2012;2012:98-101. doi: 10.1109/EMBC.2012.6345880.

PMID:
23365841
14.

Differentiating tumor recurrence from treatment necrosis: a review of neuro-oncologic imaging strategies.

Verma N, Cowperthwaite MC, Burnett MG, Markey MK.

Neuro Oncol. 2013 May;15(5):515-34. doi: 10.1093/neuonc/nos307. Epub 2013 Jan 16. Review.

15.

Model-driven, probabilistic level set based segmentation of magnetic resonance images of the brain.

Verma N, Muralidhar GS, Bovik AC, Cowperthwaite MC, Markey MK.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:2821-4. doi: 10.1109/IEMBS.2011.6090780.

PMID:
22254928
16.

Dysphagia after anterior cervical spine surgery: incidence and risk factors.

Kalb S, Reis MT, Cowperthwaite MC, Fox DJ, Lefevre R, Theodore N, Papadopoulos SM, Sonntag VK.

World Neurosurg. 2012 Jan;77(1):183-7. doi: 10.1016/j.wneu.2011.07.004. Epub 2011 Nov 15.

PMID:
22155226
17.

An analysis of admissions from 155 United States hospitals to determine the influence of weather on stroke incidence.

Cowperthwaite MC, Burnett MG.

J Clin Neurosci. 2011 May;18(5):618-23. doi: 10.1016/j.jocn.2010.08.035.

PMID:
21398128
18.

Treatment course and outcomes following drug and alcohol-related traumatic injuries.

Cowperthwaite MC, Burnett MG.

J Trauma Manag Outcomes. 2011 Jan 20;5:3. doi: 10.1186/1752-2897-5-3.

19.

The association between weather and spontaneous subarachnoid hemorrhage: an analysis of 155 US hospitals.

Cowperthwaite MC, Burnett MG.

Neurosurgery. 2011 Jan;68(1):132-8; discussion 138-9. doi: 10.1227/NEU.0b013e3181fe23a1.

PMID:
21099710
20.

Genome-wide association studies: a powerful tool for neurogenomics.

Cowperthwaite MC, Mohanty D, Burnett MG.

Neurosurg Focus. 2010 Jan;28(1):E2. doi: 10.3171/2010.10.FOCUS09186. Review.

PMID:
20043717
21.

The ascent of the abundant: how mutational networks constrain evolution.

Cowperthwaite MC, Economo EP, Harcombe WR, Miller EL, Meyers LA.

PLoS Comput Biol. 2008 Jul 18;4(7):e1000110. doi: 10.1371/journal.pcbi.1000110.

22.

Bioinformatic analysis of the contribution of primer sequences to aptamer structures.

Cowperthwaite MC, Ellington AD.

J Mol Evol. 2008 Jul;67(1):95-102. doi: 10.1007/s00239-008-9130-4. Epub 2008 Jul 2.

23.

From bad to good: Fitness reversals and the ascent of deleterious mutations.

Cowperthwaite MC, Bull JJ, Meyers LA.

PLoS Comput Biol. 2006 Oct 20;2(10):e141.

24.

Distributions of beneficial fitness effects in RNA.

Cowperthwaite MC, Bull JJ, Meyers LA.

Genetics. 2005 Aug;170(4):1449-57. Epub 2005 Jun 8.

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