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Items: 1 to 50 of 318

1.

Trophic Selective Pressures Organize the Composition of Endolithic Microbial Communities From Global Deserts.

Qu EB, Omelon CR, Oren A, Meslier V, Cowan DA, Maggs-Kölling G, DiRuggiero J.

Front Microbiol. 2020 Jan 8;10:2952. doi: 10.3389/fmicb.2019.02952. eCollection 2019.

2.

The genome of Alcaligenes aquatilis strain BU33N: Insights into hydrocarbon degradation capacity.

Mahjoubi M, Aliyu H, Cappello S, Naifer M, Souissi Y, Cowan DA, Cherif A.

PLoS One. 2019 Sep 24;14(9):e0221574. doi: 10.1371/journal.pone.0221574. eCollection 2019.

3.

Microbiomics of Namib Desert habitats.

Cowan DA, Hopkins DW, Jones BE, Maggs-Kölling G, Majewska R, Ramond JB.

Extremophiles. 2020 Jan;24(1):17-29. doi: 10.1007/s00792-019-01122-7. Epub 2019 Aug 2. Review.

PMID:
31376000
4.

Characterization and homology modelling of a novel multi-modular and multi-functional Paenibacillus mucilaginosus glycoside hydrolase.

Mosina NL, Schubert WD, Cowan DA.

Extremophiles. 2019 Nov;23(6):681-686. doi: 10.1007/s00792-019-01121-8. Epub 2019 Aug 1.

PMID:
31372752
5.

The Healthy Human Blood Microbiome: Fact or Fiction?

Castillo DJ, Rifkin RF, Cowan DA, Potgieter M.

Front Cell Infect Microbiol. 2019 May 8;9:148. doi: 10.3389/fcimb.2019.00148. eCollection 2019. Review.

6.

Nutrient Acquisition, Rather Than Stress Response Over Diel Cycles, Drives Microbial Transcription in a Hyper-Arid Namib Desert Soil.

León-Sobrino C, Ramond JB, Maggs-Kölling G, Cowan DA.

Front Microbiol. 2019 May 14;10:1054. doi: 10.3389/fmicb.2019.01054. eCollection 2019.

7.

Ancient landscapes of the Namib Desert harbor high levels of genetic variability and deeply divergent lineages for Collembola.

Collins GE, Hogg ID, Baxter JR, Maggs-Kölling G, Cowan DA.

Ecol Evol. 2019 Apr 10;9(8):4969-4979. doi: 10.1002/ece3.5103. eCollection 2019 Apr.

8.

Airborne microbial transport limitation to isolated Antarctic soil habitats.

Archer SDJ, Lee KC, Caruso T, Maki T, Lee CK, Cary SC, Cowan DA, Maestre FT, Pointing SB.

Nat Microbiol. 2019 Jun;4(6):925-932. doi: 10.1038/s41564-019-0370-4. Epub 2019 Mar 4.

PMID:
30833723
9.

Genomics of Alkaliphiles.

Lebre PH, Cowan DA.

Adv Biochem Eng Biotechnol. 2019 Feb 23. doi: 10.1007/10_2018_83. [Epub ahead of print]

PMID:
30796503
10.

Biotic interactions are an unexpected yet critical control on the complexity of an abiotically driven polar ecosystem.

Lee CK, Laughlin DC, Bottos EM, Caruso T, Joy K, Barrett JE, Brabyn L, Nielsen UN, Adams BJ, Wall DH, Hopkins DW, Pointing SB, McDonald IR, Cowan DA, Banks JC, Stichbury GA, Jones I, Zawar-Reza P, Katurji M, Hogg ID, Sparrow AD, Storey BC, Allan Green TG, Cary SC.

Commun Biol. 2019 Feb 15;2:62. doi: 10.1038/s42003-018-0274-5. eCollection 2019.

11.

Evaluation of combined sewer overflow impacts on short-term pharmaceutical and illicit drug occurrence in a heavily urbanised tidal river catchment (London, UK).

Munro K, Martins CPB, Loewenthal M, Comber S, Cowan DA, Pereira L, Barron LP.

Sci Total Environ. 2019 Mar 20;657:1099-1111. doi: 10.1016/j.scitotenv.2018.12.108. Epub 2018 Dec 10.

12.

Rhizosheath microbial community assembly of sympatric desert speargrasses is independent of the plant host.

Marasco R, Mosqueira MJ, Fusi M, Ramond JB, Merlino G, Booth JM, Maggs-Kölling G, Cowan DA, Daffonchio D.

Microbiome. 2018 Dec 4;6(1):215. doi: 10.1186/s40168-018-0597-y.

13.

Reorganising the order Bacillales through phylogenomics.

Maayer P, Aliyu H, Cowan DA.

Syst Appl Microbiol. 2019 Mar;42(2):178-189. doi: 10.1016/j.syapm.2018.10.007. Epub 2018 Oct 26.

PMID:
30447886
14.

IRMS delta values (13 C) of nandrolone and testosterone products available in the UK: Implications for anti-doping.

Brailsford AD, Majidin WNM, Wojek N, Cowan DA, Walker C.

Drug Test Anal. 2018 Nov;10(11-12):1722-1727. doi: 10.1002/dta.2530. Epub 2018 Dec 3.

PMID:
30381908
15.

In silico characterization of the global Geobacillus and Parageobacillus secretome.

Lebre PH, Aliyu H, De Maayer P, Cowan DA.

Microb Cell Fact. 2018 Oct 3;17(1):156. doi: 10.1186/s12934-018-1005-9.

16.

A correction to the age-adjustment of the GH-2000 score used in the detection of growth hormone misuse.

Böhning D, Böhning W, Guha N, Cowan DA, Bartlett C, Sönksen PH, Holt RIG.

BMC Res Notes. 2018 Sep 5;11(1):650. doi: 10.1186/s13104-018-3741-7.

17.

Temporal shifts of fungal communities in the rhizosphere and on tubers in potato fields.

Zimudzi J, van der Waals JE, Coutinho TA, Cowan DA, Valverde A.

Fungal Biol. 2018 Sep;122(9):928-934. doi: 10.1016/j.funbio.2018.05.008. Epub 2018 Jun 6.

PMID:
30115327
18.

Agulhas Current properties shape microbial community diversity and potential functionality.

Phoma S, Vikram S, Jansson JK, Ansorge IJ, Cowan DA, Van de Peer Y, Makhalanyane TP.

Sci Rep. 2018 Jul 12;8(1):10542. doi: 10.1038/s41598-018-28939-0.

19.

The Functional Potential of the Rhizospheric Microbiome of an Invasive Tree Species, Acacia dealbata.

Kamutando CN, Vikram S, Kamgan-Nkuekam G, Makhalanyane TP, Greve M, Le Roux JJ, Richardson DM, Cowan DA, Valverde A.

Microb Ecol. 2019 Jan;77(1):191-200. doi: 10.1007/s00248-018-1214-0. Epub 2018 Jun 9.

PMID:
29948018
20.

LEA Proteins and the Evolution of the WHy Domain.

Mertens J, Aliyu H, Cowan DA.

Appl Environ Microbiol. 2018 Jul 17;84(15). pii: e00539-18. doi: 10.1128/AEM.00539-18. Print 2018 Aug 1. Review.

21.

Namib Desert primary productivity is driven by cryptic microbial community N-fixation.

Ramond JB, Woodborne S, Hall G, Seely M, Cowan DA.

Sci Rep. 2018 May 2;8(1):6921. doi: 10.1038/s41598-018-25078-4.

22.

Cloning, expression and characterization of thermostable YdaP from Bacillus licheniformis 9A.

Wani Lako JD, Yengkopiong JP, Stafford WHL, Tuffin M, Cowan DA.

Acta Biochim Pol. 2018;65(1):59-66. doi: 10.18388/abp.2017_1499. Epub 2018 Mar 15.

23.

High Quality Draft Genomes of the Type Strains Geobacillus thermocatenulatus DSM 730T, G. uzenensis DSM 23175T And Parageobacillus galactosidasius DSM 18751T.

Ramaloko WT, Koen N, Polliack S, Aliyu H, Lebre PH, Mohr T, Oswald F, Zwick M, Zeigler DR, Neumann A, Syldatk C, Cowan DA, De Maayer P.

J Genomics. 2018 Feb 3;6:20-23. doi: 10.7150/jgen.22986. eCollection 2018.

24.

A reservoir of 'historical' antibiotic resistance genes in remote pristine Antarctic soils.

Van Goethem MW, Pierneef R, Bezuidt OKI, Van De Peer Y, Cowan DA, Makhalanyane TP.

Microbiome. 2018 Feb 23;6(1):40. doi: 10.1186/s40168-018-0424-5.

25.

Structural Characterization and Directed Evolution of a Novel Acetyl Xylan Esterase Reveals Thermostability Determinants of the Carbohydrate Esterase 7 Family.

Adesioye FA, Makhalanyane TP, Vikram S, Sewell BT, Schubert WD, Cowan DA.

Appl Environ Microbiol. 2018 Apr 2;84(8). pii: e02695-17. doi: 10.1128/AEM.02695-17. Print 2018 Apr 15.

26.

Why do endocrine profiles in elite athletes differ between sports?

Sönksen PH, Holt RIG, Böhning W, Guha N, Cowan DA, Bartlett C, Böhning D.

Clin Diabetes Endocrinol. 2018 Feb 7;4:3. doi: 10.1186/s40842-017-0050-3. eCollection 2018.

27.

Peptide selection for the quantification of P-III-NP in human serum by mass spectrometry.

Moncrieffe D, Parkin MC, Cowan DA.

Rapid Commun Mass Spectrom. 2018 Apr 15;32(7):535-542. doi: 10.1002/rcm.8066.

PMID:
29361649
28.

Advanced Photogrammetry to Assess Lichen Colonization in the Hyper-Arid Namib Desert.

Hinchliffe G, Bollard-Breen B, Cowan DA, Doshi A, Gillman LN, Maggs-Kolling G, de Los Rios A, Pointing SB.

Front Microbiol. 2017 Oct 27;8:2083. doi: 10.3389/fmicb.2017.02083. eCollection 2017.

29.

Energy from thin air.

Cowan DA, Makhalanyane TP.

Nature. 2017 Dec 21;552(7685):336-337. doi: 10.1038/d41586-017-07579-w. No abstract available.

PMID:
29293237
30.

Ancient oncogenesis, infection and human evolution.

Rifkin RF, Potgieter M, Ramond JB, Cowan DA.

Evol Appl. 2017 Jul 11;10(10):949-964. doi: 10.1111/eva.12497. eCollection 2017 Dec. Review.

31.

Cyanobacteria and Alphaproteobacteria May Facilitate Cooperative Interactions in Niche Communities.

Van Goethem MW, Makhalanyane TP, Cowan DA, Valverde A.

Front Microbiol. 2017 Oct 25;8:2099. doi: 10.3389/fmicb.2017.02099. eCollection 2017.

32.

Carbohydrate active enzyme domains from extreme thermophiles: components of a modular toolbox for lignocellulose degradation.

Botha J, Mizrachi E, Myburg AA, Cowan DA.

Extremophiles. 2018 Jan;22(1):1-12. doi: 10.1007/s00792-017-0974-7. Epub 2017 Nov 6. Review.

PMID:
29110088
33.

Phylogenomic, Pan-genomic, Pathogenomic and Evolutionary Genomic Insights into the Agronomically Relevant Enterobacteria Pantoea ananatis and Pantoea stewartii.

De Maayer P, Aliyu H, Vikram S, Blom J, Duffy B, Cowan DA, Smits THM, Venter SN, Coutinho TA.

Front Microbiol. 2017 Sep 14;8:1755. doi: 10.3389/fmicb.2017.01755. eCollection 2017.

34.

Genotoxicity of metal based engineered nanoparticles in aquatic organisms: A review.

Mahaye N, Thwala M, Cowan DA, Musee N.

Mutat Res. 2017 Jul;773:134-160. doi: 10.1016/j.mrrev.2017.05.004. Epub 2017 Jun 4. Review.

PMID:
28927524
35.

In planta expression of hyperthermophilic enzymes as a strategy for accelerated lignocellulosic digestion.

Mir BA, Myburg AA, Mizrachi E, Cowan DA.

Sci Rep. 2017 Sep 13;7(1):11462. doi: 10.1038/s41598-017-11026-1.

36.

Evidence of microbial rhodopsins in Antarctic Dry Valley edaphic systems.

Guerrero LD, Vikram S, Makhalanyane TP, Cowan DA.

Environ Microbiol. 2017 Sep;19(9):3755-3767. doi: 10.1111/1462-2920.13877. Epub 2017 Aug 24.

PMID:
28752953
37.

Environmental drivers of viral community composition in Antarctic soils identified by viromics.

Adriaenssens EM, Kramer R, Van Goethem MW, Makhalanyane TP, Hogg I, Cowan DA.

Microbiome. 2017 Jul 19;5(1):83. doi: 10.1186/s40168-017-0301-7.

38.

Direct Monitoring of Exogenous γ-Hydroxybutyric Acid in Body Fluids by NMR Spectroscopy.

Palomino-Schätzlein M, Wang Y, Brailsford AD, Parella T, Cowan DA, Legido-Quigley C, Pérez-Trujillo M.

Anal Chem. 2017 Aug 15;89(16):8343-8350. doi: 10.1021/acs.analchem.7b01567. Epub 2017 Aug 3.

PMID:
28714673
39.

Assembling metagenomes, one community at a time.

van der Walt AJ, van Goethem MW, Ramond JB, Makhalanyane TP, Reva O, Cowan DA.

BMC Genomics. 2017 Jul 10;18(1):521. doi: 10.1186/s12864-017-3918-9.

40.

Namib Desert Soil Microbial Community Diversity, Assembly, and Function Along a Natural Xeric Gradient.

Scola V, Ramond JB, Frossard A, Zablocki O, Adriaenssens EM, Johnson RM, Seely M, Cowan DA.

Microb Ecol. 2018 Jan;75(1):193-203. doi: 10.1007/s00248-017-1009-8. Epub 2017 Jun 24.

PMID:
28647755
41.

Rapid Analysis of Anabolic Steroid Metabolites in Urine by Combining Field Asymmetric Waveform Ion Mobility Spectrometry with Liquid Chromatography and Mass Spectrometry.

Arthur KL, Turner MA, Brailsford AD, Kicman AT, Cowan DA, Reynolds JC, Creaser CS.

Anal Chem. 2017 Jul 18;89(14):7431-7437. doi: 10.1021/acs.analchem.7b00940. Epub 2017 Jun 30.

PMID:
28613840
42.

Xerotolerant bacteria: surviving through a dry spell.

Lebre PH, De Maayer P, Cowan DA.

Nat Rev Microbiol. 2017 May;15(5):285-296. doi: 10.1038/nrmicro.2017.16. Epub 2017 Mar 20. Review.

PMID:
28316329
43.

Diel-scale temporal dynamics recorded for bacterial groups in Namib Desert soil.

Gunnigle E, Frossard A, Ramond JB, Guerrero L, Seely M, Cowan DA.

Sci Rep. 2017 Jan 10;7:40189. doi: 10.1038/srep40189.

44.

Namib Desert edaphic bacterial, fungal and archaeal communities assemble through deterministic processes but are influenced by different abiotic parameters.

Johnson RM, Ramond JB, Gunnigle E, Seely M, Cowan DA.

Extremophiles. 2017 Mar;21(2):381-392. doi: 10.1007/s00792-016-0911-1. Epub 2017 Jan 5.

PMID:
28058513
45.

Three novel bacteriophages isolated from the East African Rift Valley soda lakes.

van Zyl LJ, Nemavhulani S, Cass J, Cowan DA, Trindade M.

Virol J. 2016 Dec 3;13(1):204.

46.
47.

Erratum to: Statistical methodology for age-adjustment of the GH-2000 score detecting growth hormone misuse.

Böhning D, Böhning W, Guha N, Cowan DA, Sönksen PH, Holt RI.

BMC Med Res Methodol. 2016 Nov 28;16(1):164. No abstract available.

48.
49.

Statistical methodology for age-adjustment of the GH-2000 score detecting growth hormone misuse.

Böhning D, Böhning W, Guha N, Cowan DA, Sönksen PH, Holt RI.

BMC Med Res Methodol. 2016 Oct 28;16(1):147. Erratum in: BMC Med Res Methodol. 2016 Nov 28;16(1):164.

50.

Correction: The Gut Microbiomes of Two Pachysoma MacLeay Desert Dung Beetle Species (Coleoptera: Scarabaeidae: Scarabaeinae) Feeding on Different Diets.

Franzini PZ, Ramond JB, Scholtz CH, Sole CL, Ronca S, Cowan DA.

PLoS One. 2016 Oct 19;11(10):e0165376. doi: 10.1371/journal.pone.0165376. eCollection 2016.

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