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Items: 47

1.

Gene regulatory network architecture in different developmental contexts influences the genetic basis of morphological evolution.

Kittelmann S, Buffry AD, Franke FA, Almudi I, Yoth M, Sabaris G, Couso JP, Nunes MDS, Frankel N, Gómez-Skarmeta JL, Pueyo-Marques J, Arif S, McGregor AP.

PLoS Genet. 2018 May 3;14(5):e1007375. doi: 10.1371/journal.pgen.1007375. eCollection 2018 May.

2.

Classification and function of small open reading frames.

Couso JP, Patraquim P.

Nat Rev Mol Cell Biol. 2017 Sep;18(9):575-589. doi: 10.1038/nrm.2017.58. Epub 2017 Jul 12.

PMID:
28698598
3.

Functions of long non-coding RNAs in human disease and their conservation in Drosophila development.

Rogoyski OM, Pueyo JI, Couso JP, Newbury SF.

Biochem Soc Trans. 2017 Aug 15;45(4):895-904. doi: 10.1042/BST20160428. Epub 2017 Jul 3. Review.

PMID:
28673935
4.

New Peptides Under the s(ORF)ace of the Genome.

Pueyo JI, Magny EG, Couso JP.

Trends Biochem Sci. 2016 Aug;41(8):665-678. doi: 10.1016/j.tibs.2016.05.003. Epub 2016 May 31. Review.

PMID:
27261332
5.

Hemotin, a Regulator of Phagocytosis Encoded by a Small ORF and Conserved across Metazoans.

Pueyo JI, Magny EG, Sampson CJ, Amin U, Evans IR, Bishop SA, Couso JP.

PLoS Biol. 2016 Mar 25;14(3):e1002395. doi: 10.1371/journal.pbio.1002395. eCollection 2016 Mar.

6.

Ribosomal profiling adds new coding sequences to the proteome.

Mumtaz MA, Couso JP.

Biochem Soc Trans. 2015 Dec;43(6):1271-6. doi: 10.1042/BST20150170. Review.

PMID:
26614672
7.

Discovery and characterization of smORF-encoded bioactive polypeptides.

Saghatelian A, Couso JP.

Nat Chem Biol. 2015 Dec;11(12):909-16. doi: 10.1038/nchembio.1964. Review.

8.

Pentamidine rescues contractility and rhythmicity in a Drosophila model of myotonic dystrophy heart dysfunction.

Chakraborty M, Selma-Soriano E, Magny E, Couso JP, Pérez-Alonso M, Charlet-Berguerand N, Artero R, Llamusi B.

Dis Model Mech. 2015 Dec;8(12):1569-78. doi: 10.1242/dmm.021428. Epub 2015 Oct 29.

9.

Finding smORFs: getting closer.

Couso JP.

Genome Biol. 2015 Sep 14;16:189. doi: 10.1186/s13059-015-0765-3.

10.

Extensive translation of small Open Reading Frames revealed by Poly-Ribo-Seq.

Aspden JL, Eyre-Walker YC, Phillips RJ, Amin U, Mumtaz MA, Brocard M, Couso JP.

Elife. 2014 Aug 21;3:e03528. doi: 10.7554/eLife.03528.

11.

Activation of Drosophila hemocyte motility by the ecdysone hormone.

Sampson CJ, Amin U, Couso JP.

Biol Open. 2013 Dec 15;2(12):1412-20. doi: 10.1242/bio.20136619.

12.

Conserved regulation of cardiac calcium uptake by peptides encoded in small open reading frames.

Magny EG, Pueyo JI, Pearl FM, Cespedes MA, Niven JE, Bishop SA, Couso JP.

Science. 2013 Sep 6;341(6150):1116-20. doi: 10.1126/science.1238802. Epub 2013 Aug 22.

13.

Interplay between a Wnt-dependent organiser and the Notch segmentation clock regulates posterior development in Periplaneta americana.

Chesebro JE, Pueyo JI, Couso JP.

Biol Open. 2013 Feb 15;2(2):227-37. doi: 10.1242/bio.20123699. Epub 2012 Dec 19.

14.

Hundreds of putatively functional small open reading frames in Drosophila.

Ladoukakis E, Pereira V, Magny EG, Eyre-Walker A, Couso JP.

Genome Biol. 2011 Nov 25;12(11):R118. doi: 10.1186/gb-2011-12-11-r118.

15.

Hedgehog, Patched and Dispatched near the basement.

Couso JP.

Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12565-6. doi: 10.1073/pnas.1109298108. Epub 2011 Jul 21. No abstract available.

16.

Evolution of nubbin function in hemimetabolous and holometabolous insect appendages.

Turchyn N, Chesebro J, Hrycaj S, Couso JP, Popadić A.

Dev Biol. 2011 Sep 1;357(1):83-95. doi: 10.1016/j.ydbio.2011.06.014. Epub 2011 Jun 25.

17.

Tarsal-less peptides control Notch signalling through the Shavenbaby transcription factor.

Pueyo JI, Couso JP.

Dev Biol. 2011 Jul 15;355(2):183-93. doi: 10.1016/j.ydbio.2011.03.033. Epub 2011 Apr 17.

18.

Control of Distal-less expression in the Drosophila appendages by functional 3' enhancers.

Galindo MI, Fernández-Garza D, Phillips R, Couso JP.

Dev Biol. 2011 May 15;353(2):396-410. doi: 10.1016/j.ydbio.2011.02.005. Epub 2011 Feb 12.

19.

Dioxin toxicity in vivo results from an increase in the dioxin-independent transcriptional activity of the aryl hydrocarbon receptor.

Céspedes MA, Galindo MI, Couso JP.

PLoS One. 2010 Nov 8;5(11):e15382. doi: 10.1371/journal.pone.0015382.

20.

Leg regeneration in Drosophila abridges the normal developmental program.

Bosch M, Bishop SA, Baguña J, Couso JP.

Int J Dev Biol. 2010;54(8-9):1241-50. doi: 10.1387/ijdb.093010mb.

21.

Segmentation, metamerism and the Cambrian explosion.

Couso JP.

Int J Dev Biol. 2009;53(8-10):1305-16. doi: 10.1387/ijdb.072425jc. Review.

22.

RNAi analysis of nubbin embryonic functions in a hemimetabolous insect, Oncopeltus fasciatus.

Hrycaj S, Mihajlovic M, Mahfooz N, Couso JP, Popadić A.

Evol Dev. 2008 Nov-Dec;10(6):705-16. doi: 10.1111/j.1525-142X.2008.00284.x.

PMID:
19021741
23.

Ancestral Notch-mediated segmentation revealed in the cockroach Periplaneta americana.

Pueyo JI, Lanfear R, Couso JP.

Proc Natl Acad Sci U S A. 2008 Oct 28;105(43):16614-9. doi: 10.1073/pnas.0804093105. Epub 2008 Oct 16.

24.

The 11-aminoacid long Tarsal-less peptides trigger a cell signal in Drosophila leg development.

Pueyo JI, Couso JP.

Dev Biol. 2008 Dec 15;324(2):192-201. doi: 10.1016/j.ydbio.2008.08.025. Epub 2008 Sep 5.

25.

Peptides encoded by short ORFs control development and define a new eukaryotic gene family.

Galindo MI, Pueyo JI, Fouix S, Bishop SA, Couso JP.

PLoS Biol. 2007 May;5(5):e106.

26.

A 3' cis-regulatory region controls wingless expression in the Drosophila eye and leg primordia.

Pereira PS, Pinho S, Johnson K, Couso JP, Casares F.

Dev Dyn. 2006 Jan;235(1):225-34.

27.
28.

Dynamic EGFR-Ras signalling in Drosophila leg development.

Galindo MI, Bishop SA, Couso JP.

Dev Dyn. 2005 Aug;233(4):1496-508.

30.

Comparative analysis of leg and antenna development in wild-type and homeotic Drosophila melanogaster.

Cummins M, Pueyo JI, Greig SA, Couso JP.

Dev Genes Evol. 2003 Jul;213(7):319-27. Epub 2003 May 24.

PMID:
12768424
31.

Building limb buds. Workshop on limb development.

Torres M, Couso JP, Ros MA.

EMBO Rep. 2002 Oct;3(10):933-7. No abstract available.

32.

Different mechanisms initiate and maintain wingless expression in the Drosophila wing hinge.

Rodríguez Dd Ddel A, Terriente J, Galindo MI, Couso JP, Díaz-Benjumea FJ.

Development. 2002 Sep;129(17):3995-4004.

33.

Leg patterning driven by proximal-distal interactions and EGFR signaling.

Galindo MI, Bishop SA, Greig S, Couso JP.

Science. 2002 Jul 12;297(5579):256-9.

35.

Proximal-distal leg development in Drosophila requires the apterous gene and the Lim1 homologue dlim1.

Pueyo JI, Galindo MI, Bishop SA, Couso JP.

Development. 2000 Dec;127(24):5391-402.

36.

Intercalation of cell fates during tarsal development in Drosophila.

Galindo MI, Couso JP.

Bioessays. 2000 Sep;22(9):777-80. Review.

PMID:
10944578
37.

The abruptex mutations of notch disrupt the establishment of proneural clusters in Drosophila.

Brennan K, Tateson R, Lieber T, Couso JP, Zecchini V, Arias AM.

Dev Biol. 1999 Dec 1;216(1):230-42.

38.

Composite signalling from Serrate and Delta establishes leg segments in Drosophila through Notch.

Bishop SA, Klein T, Arias AM, Couso JP.

Development. 1999 Jul;126(13):2993-3003.

39.

Proximo-distal development in the legs of Drosophila.

Couso JP, Bishop SA.

Int J Dev Biol. 1998;42(3):345-52. Review.

40.

Wing development and specification of dorsal cell fates in the absence of apterous in Drosophila.

Klein T, Couso JP, Martinez Arias A.

Curr Biol. 1998 Mar 26;8(7):417-20.

41.
42.

The fu gene discriminates between pathways to control dpp expression in Drosophila imaginal discs.

Sánchez-Herrero E, Couso JP, Capdevila J, Guerrero I.

Mech Dev. 1996 Apr;55(2):159-70.

43.

Serrate and wingless cooperate to induce vestigial gene expression and wing formation in Drosophila.

Couso JP, Knust E, Martinez Arias A.

Curr Biol. 1995 Dec 1;5(12):1437-48.

44.

Notch is required for wingless signaling in the epidermis of Drosophila.

Couso JP, Martinez Arias A.

Cell. 1994 Oct 21;79(2):259-72.

PMID:
7954794
45.

The wingless signalling pathway and the patterning of the wing margin in Drosophila.

Couso JP, Bishop SA, Martinez Arias A.

Development. 1994 Mar;120(3):621-36.

46.

Embryonic limb development in Drosophila.

Couso JP, González-Gaitán M.

Trends Genet. 1993 Nov;9(11):371-3. Review. No abstract available.

PMID:
8310531
47.

A wingless-dependent polar coordinate system in Drosophila imaginal discs.

Couso JP, Bate M, Martínez-Arias A.

Science. 1993 Jan 22;259(5094):484-9.

PMID:
8424170

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