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Items: 14

1.

Noncoding regions are the main source of targetable tumor-specific antigens.

Laumont CM, Vincent K, Hesnard L, Audemard É, Bonneil É, Laverdure JP, Gendron P, Courcelles M, Hardy MP, Côté C, Durette C, St-Pierre C, Benhammadi M, Lanoix J, Vobecky S, Haddad E, Lemieux S, Thibault P, Perreault C.

Sci Transl Med. 2018 Dec 5;10(470). pii: eaau5516. doi: 10.1126/scitranslmed.aau5516.

PMID:
30518613
2.

Comparison of the MHC I Immunopeptidome Repertoire of B-Cell Lymphoblasts Using Two Isolation Methods.

Lanoix J, Durette C, Courcelles M, Cossette É, Comtois-Marotte S, Hardy MP, Côté C, Perreault C, Thibault P.

Proteomics. 2018 Jun;18(12):e1700251. doi: 10.1002/pmic.201700251. Epub 2018 Apr 24.

PMID:
29508533
3.

The SysteMHC Atlas project.

Shao W, Pedrioli PGA, Wolski W, Scurtescu C, Schmid E, Vizcaíno JA, Courcelles M, Schuster H, Kowalewski D, Marino F, Arlehamn CSL, Vaughan K, Peters B, Sette A, Ottenhoff THM, Meijgaarden KE, Nieuwenhuizen N, Kaufmann SHE, Schlapbach R, Castle JC, Nesvizhskii AI, Nielsen M, Deutsch EW, Campbell DS, Moritz RL, Zubarev RA, Ytterberg AJ, Purcell AW, Marcilla M, Paradela A, Wang Q, Costello CE, Ternette N, van Veelen PA, van Els CACM, Heck AJR, de Souza GA, Sollid LM, Admon A, Stevanovic S, Rammensee HG, Thibault P, Perreault C, Bassani-Sternberg M, Aebersold R, Caron E.

Nucleic Acids Res. 2018 Jan 4;46(D1):D1237-D1247. doi: 10.1093/nar/gkx664.

4.

CLMSVault: A Software Suite for Protein Cross-Linking Mass-Spectrometry Data Analysis and Visualization.

Courcelles M, Coulombe-Huntington J, Cossette É, Gingras AC, Thibault P, Tyers M.

J Proteome Res. 2017 Jul 7;16(7):2645-2652. doi: 10.1021/acs.jproteome.7b00205. Epub 2017 Jun 5.

5.

MHC class I-associated peptides derive from selective regions of the human genome.

Pearson H, Daouda T, Granados DP, Durette C, Bonneil E, Courcelles M, Rodenbrock A, Laverdure JP, Côté C, Mader S, Lemieux S, Thibault P, Perreault C.

J Clin Invest. 2016 Dec 1;126(12):4690-4701. doi: 10.1172/JCI88590. Epub 2016 Nov 14.

6.

Gpr161 anchoring of PKA consolidates GPCR and cAMP signaling.

Bachmann VA, Mayrhofer JE, Ilouz R, Tschaikner P, Raffeiner P, Röck R, Courcelles M, Apelt F, Lu TW, Baillie GS, Thibault P, Aanstad P, Stelzl U, Taylor SS, Stefan E.

Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7786-91. doi: 10.1073/pnas.1608061113. Epub 2016 Jun 28.

7.

Phosphoproteome dynamics reveal novel ERK1/2 MAP kinase substrates with broad spectrum of functions.

Courcelles M, Frémin C, Voisin L, Lemieux S, Meloche S, Thibault P.

Mol Syst Biol. 2013 May 28;9:669. doi: 10.1038/msb.2013.25.

8.

Occurrence and detection of phosphopeptide isomers in large-scale phosphoproteomics experiments.

Courcelles M, Bridon G, Lemieux S, Thibault P.

J Proteome Res. 2012 Jul 6;11(7):3753-65. doi: 10.1021/pr300229m. Epub 2012 Jun 22.

PMID:
22668510
9.

Phosphorylation network rewiring by gene duplication.

Freschi L, Courcelles M, Thibault P, Michnick SW, Landry CR.

Mol Syst Biol. 2011 Jul 5;7:504. doi: 10.1038/msb.2011.43.

10.

ProteoConnections: a bioinformatics platform to facilitate proteome and phosphoproteome analyses.

Courcelles M, Lemieux S, Voisin L, Meloche S, Thibault P.

Proteomics. 2011 Jul;11(13):2654-71. doi: 10.1002/pmic.201000776. Epub 2011 May 31.

PMID:
21630457
11.

A novel proteomics approach to identify SUMOylated proteins and their modification sites in human cells.

Galisson F, Mahrouche L, Courcelles M, Bonneil E, Meloche S, Chelbi-Alix MK, Thibault P.

Mol Cell Proteomics. 2011 Feb;10(2):M110.004796. doi: 10.1074/mcp.M110.004796. Epub 2010 Nov 22.

12.

The phagosomal proteome in interferon-gamma-activated macrophages.

Trost M, English L, Lemieux S, Courcelles M, Desjardins M, Thibault P.

Immunity. 2009 Jan 16;30(1):143-54. doi: 10.1016/j.immuni.2008.11.006.

13.

Artifactual sulfation of silver-stained proteins: implications for the assignment of phosphorylation and sulfation sites.

Gharib M, Marcantonio M, Lehmann SG, Courcelles M, Meloche S, Verreault A, Thibault P.

Mol Cell Proteomics. 2009 Mar;8(3):506-18. doi: 10.1074/mcp.M800327-MCP200. Epub 2008 Oct 20.

14.

Combined enzymatic and data mining approaches for comprehensive phosphoproteome analyses: application to cell signaling events of interferon-gamma-stimulated macrophages.

Marcantonio M, Trost M, Courcelles M, Desjardins M, Thibault P.

Mol Cell Proteomics. 2008 Apr;7(4):645-60. Epub 2007 Nov 14.

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