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Items: 1 to 50 of 56

1.

Reliable ABC model choice via random forests.

Pudlo P, Marin JM, Estoup A, Cornuet JM, Gautier M, Robert CP.

Bioinformatics. 2016 Mar 15;32(6):859-66. doi: 10.1093/bioinformatics/btv684. Epub 2015 Nov 20.

PMID:
26589278
2.

DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data.

Cornuet JM, Pudlo P, Veyssier J, Dehne-Garcia A, Gautier M, Leblois R, Marin JM, Estoup A.

Bioinformatics. 2014 Apr 15;30(8):1187-1189. Epub 2014 Jan 2.

PMID:
24389659
3.

The effect of RAD allele dropout on the estimation of genetic variation within and between populations.

Gautier M, Gharbi K, Cezard T, Foucaud J, Kerdelhué C, Pudlo P, Cornuet JM, Estoup A.

Mol Ecol. 2013 Jun;22(11):3165-78. doi: 10.1111/mec.12089. Epub 2012 Oct 30.

PMID:
23110526
4.

Estimation of demo-genetic model probabilities with Approximate Bayesian Computation using linear discriminant analysis on summary statistics.

Estoup A, Lombaert E, Marin JM, Guillemaud T, Pudlo P, Robert CP, Cornuet JM.

Mol Ecol Resour. 2012 Sep;12(5):846-55. doi: 10.1111/j.1755-0998.2012.03153.x. Epub 2012 May 9.

PMID:
22571382
5.

Test of colonisation scenarios reveals complex invasion history of the red tomato spider mite Tetranychus evansi.

Boubou A, Migeon A, Roderick GK, Auger P, Cornuet JM, Magalhães S, Navajas M.

PLoS One. 2012;7(4):e35601. doi: 10.1371/journal.pone.0035601. Epub 2012 Apr 23.

6.

Lack of confidence in approximate Bayesian computation model choice.

Robert CP, Cornuet JM, Marin JM, Pillai NS.

Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):15112-7. doi: 10.1073/pnas.1102900108. Epub 2011 Aug 29.

7.

Genetic inferences about the population dynamics of codling moth females at a local scale.

Franck P, Ricci B, Klein EK, Olivares J, Simon S, Cornuet JM, Lavigne C.

Genetica. 2011 Jul;139(7):949-60. doi: 10.1007/s10709-011-9598-5. Epub 2011 Jul 23.

PMID:
21786027
8.

Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus.

Estoup A, Baird SJ, Ray N, Currat M, Cornuet JM, Santos F, Beaumont MA, Excoffier L.

Mol Ecol Resour. 2010 Sep;10(5):886-901. doi: 10.1111/j.1755-0998.2010.02882.x. Epub 2010 Jun 2.

PMID:
21565099
9.

Meiotic recombination dramatically decreased in thelytokous queens of the little fire ant and their sexually produced workers.

Rey O, Loiseau A, Facon B, Foucaud J, Orivel J, Cornuet JM, Robert S, Dobigny G, Delabie JH, Mariano Cdos S, Estoup A.

Mol Biol Evol. 2011 Sep;28(9):2591-601. doi: 10.1093/molbev/msr082. Epub 2011 Mar 31.

PMID:
21459760
10.

Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0).

Cornuet JM, Ravigné V, Estoup A.

BMC Bioinformatics. 2010 Jul 28;11:401. doi: 10.1186/1471-2105-11-401.

11.

Bridgehead effect in the worldwide invasion of the biocontrol harlequin ladybird.

Lombaert E, Guillemaud T, Cornuet JM, Malausa T, Facon B, Estoup A.

PLoS One. 2010 Mar 17;5(3):e9743. doi: 10.1371/journal.pone.0009743.

12.

In defence of model-based inference in phylogeography.

Beaumont MA, Nielsen R, Robert C, Hey J, Gaggiotti O, Knowles L, Estoup A, Panchal M, Corander J, Hickerson M, Sisson SA, Fagundes N, Chikhi L, Beerli P, Vitalis R, Cornuet JM, Huelsenbeck J, Foll M, Yang Z, Rousset F, Balding D, Excoffier L.

Mol Ecol. 2010 Feb;19(3):436-446. doi: 10.1111/j.1365-294X.2009.04515.x. Epub 2010 Jan 11.

13.

Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data.

Guillemaud T, Beaumont MA, Ciosi M, Cornuet JM, Estoup A.

Heredity (Edinb). 2010 Jan;104(1):88-99. doi: 10.1038/hdy.2009.92.

14.

Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation.

Cornuet JM, Santos F, Beaumont MA, Robert CP, Marin JM, Balding DJ, Guillemaud T, Estoup A.

Bioinformatics. 2008 Dec 1;24(23):2713-9. doi: 10.1093/bioinformatics/btn514. Epub 2008 Oct 7.

15.

Bread, beer and wine: Saccharomyces cerevisiae diversity reflects human history.

Legras JL, Merdinoglu D, Cornuet JM, Karst F.

Mol Ecol. 2007 May;16(10):2091-102.

PMID:
17498234
16.
17.

The genome of Apis mellifera: dialog between linkage mapping and sequence assembly.

Solignac M, Zhang L, Mougel F, Li B, Vautrin D, Monnerot M, Cornuet JM, Worley KC, Weinstock GM, Gibbs RA.

Genome Biol. 2007;8(3):403.

18.

A note on the accuracy of PAC-likelihood inference with microsatellite data.

Cornuet JM, Beaumont MA.

Theor Popul Biol. 2007 Feb;71(1):12-9. Epub 2006 Jun 15.

PMID:
16890970
19.

Inference on microsatellite mutation processes in the invasive mite, Varroa destructor, using reversible jump Markov chain Monte Carlo.

Cornuet JM, Beaumont MA, Estoup A, Solignac M.

Theor Popul Biol. 2006 Mar;69(2):129-44. Epub 2005 Oct 28.

PMID:
16257428
20.

Assortative mating in sympatric host races of the European corn borer.

Malausa T, Bethenod MT, Bontemps A, Bourguet D, Cornuet JM, Ponsard S.

Science. 2005 Apr 8;308(5719):258-60.

21.

The invasive Korea and Japan types of Varroa destructor, ectoparasitic mites of the Western honeybee (Apis mellifera), are two partly isolated clones.

Solignac M, Cornuet JM, Vautrin D, Le Conte Y, Anderson D, Evans J, Cros-Arteil S, Navajas M.

Proc Biol Sci. 2005 Feb 22;272(1561):411-9.

22.

Bayesian analysis of an admixture model with mutations and arbitrarily linked markers.

Excoffier L, Estoup A, Cornuet JM.

Genetics. 2005 Mar;169(3):1727-38. Epub 2005 Jan 16.

23.

Genetic analysis of complex demographic scenarios: spatially expanding populations of the cane toad, Bufo marinus.

Estoup A, Beaumont M, Sennedot F, Moritz C, Cornuet JM.

Evolution. 2004 Sep;58(9):2021-36.

PMID:
15521459
24.

GENECLASS2: a software for genetic assignment and first-generation migrant detection.

Piry S, Alapetite A, Cornuet JM, Paetkau D, Baudouin L, Estoup A.

J Hered. 2004 Nov-Dec;95(6):536-9.

PMID:
15475402
25.

Analytical bayesian approach for assigning individuals to populations.

Baudouin L, Piry S, Cornuet JM.

J Hered. 2004 May-Jun;95(3):217-24. Erratum in: J Hered. 2004 Jul-Aug;95(4):following table of contents.

PMID:
15220388
26.

A microsatellite-based linkage map of the honeybee, Apis mellifera L.

Solignac M, Vautrin D, Baudry E, Mougel F, Loiseau A, Cornuet JM.

Genetics. 2004 May;167(1):253-62.

27.
28.

Estimating admixture proportions with microsatellites: comparison of methods based on simulated data.

Choisy M, Franck P, Cornuet JM.

Mol Ecol. 2004 Apr;13(4):955-68.

PMID:
15012768
29.

The complete sequence of the mitochondrial genome of the honeybee ectoparasite mite Varroa destructor (Acari: Mesostigmata).

Navajas M, Le Conte Y, Solignac M, Cros-Arteil S, Cornuet JM.

Mol Biol Evol. 2002 Dec;19(12):2313-7. No abstract available. Erratum in: Mol Biol Evol. 2003 Apr;20(4):663.

PMID:
12446822
30.

Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis.

Estoup A, Jarne P, Cornuet JM.

Mol Ecol. 2002 Sep;11(9):1591-604. Review.

PMID:
12207711
31.

Genetic structure of a greenhouse population of the spider mite Tetranychus urticae: spatio-temporal analysis with microsatellite markers.

Navajas M, Perrot-Minnot MJ, Lagnel J, Migeon A, Bourse T, Cornuet JM.

Insect Mol Biol. 2002 Apr;11(2):157-65.

PMID:
11966881
32.
33.

Inferring population history from microsatellite and enzyme data in serially introduced cane toads, Bufo marinus.

Estoup A, Wilson IJ, Sullivan C, Cornuet JM, Moritz C.

Genetics. 2001 Dec;159(4):1671-87.

34.

Genetic diversity of the honeybee in Africa: microsatellite and mitochondrial data.

Franck P, Garnery L, Loiseau A, Oldroyd BP, Hepburn HR, Solignac M, Cornuet JM.

Heredity (Edinb). 2001 Apr;86(Pt 4):420-30.

35.

Juxtaposed microsatellite systems as diagnostic markers for admixture: an empirical evaluation with brown trout (Salmo trutta) as model organism.

Estoup A, Largiadèr CR, Cornuet JM, Gharbi K, Presa P, Guyomard R.

Mol Ecol. 2000 Nov;9(11):1873-86.

PMID:
11091323
36.

Hybrid origins of honeybees from italy (Apis mellifera ligustica) and sicily (A. m. sicula).

Franck P, Garnery L, Celebrano G, Solignac M, Cornuet JM.

Mol Ecol. 2000 Jul;9(7):907-21.

PMID:
10886654
37.

New methods employing multilocus genotypes to select or exclude populations as origins of individuals.

Cornuet JM, Piry S, Luikart G, Estoup A, Solignac M.

Genetics. 1999 Dec;153(4):1989-2000.

38.

Microsatellite analysis of sperm admixture in honeybee.

Franck P, Coussy H, Le Conte Y, Solignac M, Garnery L, Cornuet JM.

Insect Mol Biol. 1999 Aug;8(3):419-21.

PMID:
10469260
39.
40.

THE ORIGIN OF WEST EUROPEAN SUBSPECIES OF HONEYBEES (APIS MELLIFERA): NEW INSIGHTS FROM MICROSATELLITE AND MITOCHONDRIAL DATA.

Franck P, Garnery L, Solignac M, Cornuet JM.

Evolution. 1998 Aug;52(4):1119-1134. doi: 10.1111/j.1558-5646.1998.tb01839.x.

PMID:
28565209
41.

Distortion of allele frequency distributions provides a test for recent population bottlenecks.

Luikart G, Allendorf FW, Cornuet JM, Sherwin WB.

J Hered. 1998 May-Jun;89(3):238-47.

PMID:
9656466
42.

Comparative analysis of microsatellite and allozyme markers: a case study investigating microgeographic differentiation in brown trout (Salmo trutta).

Estoup A, Rousset F, Michalakis Y, Cornuet JM, Adriamanga M, Guyomard R.

Mol Ecol. 1998 Mar;7(3):339-53.

PMID:
9561790
43.

Classifying individuals among infra-specific taxa using microsatellite data and neural networks.

Cornuet JM, Aulagnier S, Lek S, Franck S, Solignac M.

C R Acad Sci III. 1996 Dec;319(12):1167-77.

PMID:
9091187
45.

Genetic differentiation of continental and island populations of Bombus terrestris (Hymenoptera: Apidae) in Europe.

Estoup A, Solignac M, Cornuet JM, Goudet J, Scholl A.

Mol Ecol. 1996 Feb;5(1):19-31.

PMID:
9147693
46.
48.

Mitochondrial-DNA sequence evidence on the phylogeny of Australian jack-jumper ants of the Myrmecia pilosula complex.

Crozier RH, Dobric N, Imai HT, Graur D, Cornuet JM, Taylor RW.

Mol Phylogenet Evol. 1995 Mar;4(1):20-30.

PMID:
7620633
49.

Honeybees have putative olfactory receptor proteins similar to those of vertebrates.

Danty E, Cornuet JM, Masson C.

C R Acad Sci III. 1994 Dec;317(12):1073-9.

PMID:
7697463

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