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Items: 22

1.

Operative Binding of Class I Release Factors and YaeJ Stabilizes the Ribosome in the Nonrotated State.

Casy W, Prater AR, Cornish PV.

Biochemistry. 2018 Apr 3;57(13):1954-1966. doi: 10.1021/acs.biochem.7b00824. Epub 2018 Mar 26.

PMID:
29499110
2.

Plasmonic gratings with nano-protrusions made by glancing angle deposition for single-molecule super-resolution imaging.

Chen B, Wood A, Pathak A, Mathai J, Bok S, Zheng H, Hamm S, Basuray S, Grant S, Gangopadhyay K, Cornish PV, Gangopadhyay S.

Nanoscale. 2016 Jun 16;8(24):12189-201. doi: 10.1039/c5nr09165a.

PMID:
27250765
3.

Preparation of ribosomes for smFRET studies: A simplified approach.

Shebl B, Menke DE, Pennella M, Poudyal RR, Burke DH, Cornish PV.

Arch Biochem Biophys. 2016 Aug 1;603:118-30. doi: 10.1016/j.abb.2016.05.010. Epub 2016 May 19.

PMID:
27208427
4.

Single-Molecule Detection in Nanogap-Embedded Plasmonic Gratings.

Chen B, Pathak A, Gangopadhyay K, Cornish PV, Gangopadhyay S.

Nanobiomedicine (Rij). 2015 Jan 1;2:8. doi: 10.5772/61094. eCollection 2015 Jan-Dec.

5.

Loss of Arabidopsis thaliana Dynamin-Related Protein 2B reveals separation of innate immune signaling pathways.

Smith JM, Leslie ME, Robinson SJ, Korasick DA, Zhang T, Backues SK, Cornish PV, Koo AJ, Bednarek SY, Heese A.

PLoS Pathog. 2014 Dec 18;10(12):e1004578. doi: 10.1371/journal.ppat.1004578. eCollection 2014 Dec.

6.

Ribosome structure and dynamics by smFRET microscopy.

Shebl B, Norman Z, Cornish PV.

Methods Enzymol. 2014;549:375-406. doi: 10.1016/B978-0-12-801122-5.00016-7.

PMID:
25432757
7.

Single molecule studies of RNA-RNA interactions.

Yu D, Qin P, Cornish PV.

Methods Mol Biol. 2015;1240:97-112. doi: 10.1007/978-1-4939-1896-6_7.

PMID:
25352139
8.

RNA-protein distance patterns in ribosomes reveal the mechanism of translational attenuation.

Yu D, Zhang C, Qin P, Cornish PV, Xu D.

Sci China Life Sci. 2014 Nov;57(11):1131-9. doi: 10.1007/s11427-014-4753-8. Epub 2014 Oct 18.

9.

Structured mRNA induces the ribosome into a hyper-rotated state.

Qin P, Yu D, Zuo X, Cornish PV.

EMBO Rep. 2014 Feb;15(2):185-90. doi: 10.1002/embr.201337762. Epub 2014 Jan 8.

10.

Antibiotics that bind to the A site of the large ribosomal subunit can induce mRNA translocation.

Ermolenko DN, Cornish PV, Ha T, Noller HF.

RNA. 2013 Feb;19(2):158-66. doi: 10.1261/rna.035964.112. Epub 2012 Dec 17.

11.

Fluorescence enhancement from nano-gap embedded plasmonic gratings by a novel fabrication technique with HD-DVD.

Bhatnagar K, Pathak A, Menke D, Cornish PV, Gangopadhyay K, Korampally V, Gangopadhyay S.

Nanotechnology. 2012 Dec 14;23(49):495201. doi: 10.1088/0957-4484/23/49/495201. Epub 2012 Nov 16.

PMID:
23154752
12.

Following movement of the L1 stalk between three functional states in single ribosomes.

Cornish PV, Ermolenko DN, Staple DW, Hoang L, Hickerson RP, Noller HF, Ha T.

Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2571-6. doi: 10.1073/pnas.0813180106. Epub 2009 Feb 3. Erratum in: Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5448.

13.

Cytosolic viral sensor RIG-I is a 5'-triphosphate-dependent translocase on double-stranded RNA.

Myong S, Cui S, Cornish PV, Kirchhofer A, Gack MU, Jung JU, Hopfner KP, Ha T.

Science. 2009 Feb 20;323(5917):1070-4. doi: 10.1126/science.1168352. Epub 2009 Jan 1.

14.

Frameshifting RNA pseudoknots: structure and mechanism.

Giedroc DP, Cornish PV.

Virus Res. 2009 Feb;139(2):193-208. doi: 10.1016/j.virusres.2008.06.008. Epub 2008 Jul 25. Review.

15.

Spontaneous intersubunit rotation in single ribosomes.

Cornish PV, Ermolenko DN, Noller HF, Ha T.

Mol Cell. 2008 Jun 6;30(5):578-88. doi: 10.1016/j.molcel.2008.05.004.

16.

A survey of single-molecule techniques in chemical biology.

Cornish PV, Ha T.

ACS Chem Biol. 2007 Jan 23;2(1):53-61. Review.

PMID:
17243783
17.
18.
19.

Dissecting non-canonical interactions in frameshift-stimulating mRNA pseudoknots.

Cornish PV, Giedroc DP, Hennig M.

J Biomol NMR. 2006 Jul;35(3):209-23.

PMID:
16865417
20.

A loop 2 cytidine-stem 1 minor groove interaction as a positive determinant for pseudoknot-stimulated -1 ribosomal frameshifting.

Cornish PV, Hennig M, Giedroc DP.

Proc Natl Acad Sci U S A. 2005 Sep 6;102(36):12694-9. Epub 2005 Aug 25.

21.

Detection of scalar couplings involving 2'-hydroxyl protons across hydrogen bonds in a frameshifting mRNA pseudoknot.

Giedroc DP, Cornish PV, Hennig M.

J Am Chem Soc. 2003 Apr 23;125(16):4676-7.

PMID:
12696863
22.

Thermodynamic analysis of conserved loop-stem interactions in P1-P2 frameshifting RNA pseudoknots from plant Luteoviridae.

Nixon PL, Cornish PV, Suram SV, Giedroc DP.

Biochemistry. 2002 Aug 27;41(34):10665-74.

PMID:
12186552

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