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Items: 1 to 50 of 128

1.

Publisher Correction: Mendelian randomisation study of the relationship between vitamin D and risk of glioma.

Takahashi H, Cornish AJ, Sud A, Law PJ, Kinnersley B, Ostrom QT, Labreche K, Eckel-Passow JE, Armstrong GN, Claus EB, Il'yasova D, Schildkraut J, Barnholtz-Sloan JS, Olson SH, Bernstein JL, Lai RK, Schoemaker MJ, Simon M, Hoffmann P, Nöthen MM, Jöckel KH, Chanock S, Rajaraman P, Johansen C, Jenkins RB, Melin BS, Wrensch MR, Sanson M, Bondy ML, Turnbull C, Houlston RS.

Sci Rep. 2019 May 23;9(1):7924. doi: 10.1038/s41598-019-43787-2.

2.

PISD is a mitochondrial disease gene causing skeletal dysplasia, cataracts, and white matter changes.

Zhao T, Goedhart CM, Sam PN, Sabouny R, Lingrell S, Cornish AJ, Lamont RE, Bernier FP, Sinasac D, Parboosingh JS; Care4Rare Canada Consortium, Vance JE, Claypool SM, Innes AM, Shutt TE.

Life Sci Alliance. 2019 Mar 11;2(2). pii: e201900353. doi: 10.26508/lsa.201900353. Print 2019 Apr.

3.

Mendelian randomisation: A powerful and inexpensive method for identifying and excluding non-genetic risk factors for colorectal cancer.

Cornish AJ, Tomlinson IPM, Houlston RS.

Mol Aspects Med. 2019 Feb 4. pii: S0098-2997(18)30118-3. doi: 10.1016/j.mam.2019.01.002. [Epub ahead of print] Review.

4.

Mendelian randomization provides support for obesity as a risk factor for meningioma.

Takahashi H, Cornish AJ, Sud A, Law PJ, Disney-Hogg L, Calvocoressi L, Lu L, Hansen HM, Smirnov I, Walsh KM, Schramm J, Hoffmann P, Nöthen MM, Jöckel KH, Schildkraut JM, Simon M, Bondy M, Wrensch M, Wiemels JL, Claus EB, Turnbull C, Houlston RS.

Sci Rep. 2019 Jan 22;9(1):309. doi: 10.1038/s41598-018-36186-6.

5.

Identification of recurrent noncoding mutations in B-cell lymphoma using capture Hi-C.

Cornish AJ, Hoang PH, Dobbins SE, Law PJ, Chubb D, Orlando G, Houlston RS.

Blood Adv. 2019 Jan 8;3(1):21-32. doi: 10.1182/bloodadvances.2018026419.

6.

Demographics Regarding Belief in Non-Human Animal Sentience and Emotional Empathy with Animals: A Pilot Study among Attendees of an Animal Welfare Symposium.

Cornish A, Wilson B, Raubenheimer D, McGreevy P.

Animals (Basel). 2018 Oct 4;8(10). pii: E174. doi: 10.3390/ani8100174.

7.

Promoter capture Hi-C-based identification of recurrent noncoding mutations in colorectal cancer.

Orlando G, Law PJ, Cornish AJ, Dobbins SE, Chubb D, Broderick P, Litchfield K, Hariri F, Pastinen T, Osborne CS, Taipale J, Houlston RS.

Nat Genet. 2018 Oct;50(10):1375-1380. doi: 10.1038/s41588-018-0211-z. Epub 2018 Sep 17.

8.

Importance of Welfare and Ethics Competence Regarding Animals Kept for Scientific Purposes to Veterinary Students in Australia and New Zealand.

Collins T, Cornish A, Hood J, Degeling C, Fisher AD, Freire R, Hazel SJ, Johnson J, Lloyd JKF, Phillips CJ, Tzioumis V, McGreevy PD.

Vet Sci. 2018 Jul 14;5(3). pii: E66. doi: 10.3390/vetsci5030066.

9.

Ranking of Production Animal Welfare and Ethics Issues in Australia and New Zealand by Veterinary Students.

Cornish A, Fisher AD, Collins T, Degeling C, Freire R, Hazel SJ, Hood J, Lloyd JKF, Phillips CJC, Stafford KJ, Tzioumis V, McGreevy PD.

Vet Sci. 2018 Jul 12;5(3). pii: E65. doi: 10.3390/vetsci5030065.

10.

Comparative molecular characterization of typical and exceptional responders in glioblastoma.

Wipfler K, Cornish AS, Guda C.

Oncotarget. 2018 Jun 19;9(47):28421-28433. doi: 10.18632/oncotarget.25420. eCollection 2018 Jun 19.

11.

Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment.

Azizi E, Carr AJ, Plitas G, Cornish AE, Konopacki C, Prabhakaran S, Nainys J, Wu K, Kiseliovas V, Setty M, Choi K, Fromme RM, Dao P, McKenney PT, Wasti RC, Kadaveru K, Mazutis L, Rudensky AY, Pe'er D.

Cell. 2018 Aug 23;174(5):1293-1308.e36. doi: 10.1016/j.cell.2018.05.060. Epub 2018 Jun 28.

PMID:
29961579
12.

Genome-wide association analysis identifies a meningioma risk locus at 11p15.5.

Claus EB, Cornish AJ, Broderick P, Schildkraut JM, Dobbins SE, Holroyd A, Calvocoressi L, Lu L, Hansen HM, Smirnov I, Walsh KM, Schramm J, Hoffmann P, Nöthen MM, Jöckel KH, Swerdlow A, Larsen SB, Johansen C, Simon M, Bondy M, Wrensch M, Houlston RS, Wiemels JL.

Neuro Oncol. 2018 Oct 9;20(11):1485-1493. doi: 10.1093/neuonc/noy077.

13.

Whole-genome sequencing of multiple myeloma reveals oncogenic pathways are targeted somatically through multiple mechanisms.

Hoang PH, Dobbins SE, Cornish AJ, Chubb D, Law PJ, Kaiser M, Houlston RS.

Leukemia. 2018 Nov;32(11):2459-2470. doi: 10.1038/s41375-018-0103-3. Epub 2018 Apr 9.

14.

Impact of atopy on risk of glioma: a Mendelian randomisation study.

Disney-Hogg L, Cornish AJ, Sud A, Law PJ, Kinnersley B, Jacobs DI, Ostrom QT, Labreche K, Eckel-Passow JE, Armstrong GN, Claus EB, Il'yasova D, Schildkraut J, Barnholtz-Sloan JS, Olson SH, Bernstein JL, Lai RK, Schoemaker MJ, Simon M, Hoffmann P, Nöthen MM, Jöckel KH, Chanock S, Rajaraman P, Johansen C, Jenkins RB, Melin BS, Wrensch MR, Sanson M, Bondy ML, Houlston RS.

BMC Med. 2018 Mar 15;16(1):42. doi: 10.1186/s12916-018-1027-5.

15.

Influence of obesity-related risk factors in the aetiology of glioma.

Disney-Hogg L, Sud A, Law PJ, Cornish AJ, Kinnersley B, Ostrom QT, Labreche K, Eckel-Passow JE, Armstrong GN, Claus EB, Il'yasova D, Schildkraut J, Barnholtz-Sloan JS, Olson SH, Bernstein JL, Lai RK, Swerdlow AJ, Simon M, Hoffmann P, Nöthen MM, Jöckel KH, Chanock S, Rajaraman P, Johansen C, Jenkins RB, Melin BS, Wrensch MR, Sanson M, Bondy ML, Houlston RS.

Br J Cancer. 2018 Apr;118(7):1020-1027. doi: 10.1038/s41416-018-0009-x. Epub 2018 Mar 13.

16.

Mendelian randomisation study of the relationship between vitamin D and risk of glioma.

Takahashi H, Cornish AJ, Sud A, Law PJ, Kinnersley B, Ostrom QT, Labreche K, Eckel-Passow JE, Armstrong GN, Claus EB, Il'yasova D, Schildkraut J, Barnholtz-Sloan JS, Olson SH, Bernstein JL, Lai RK, Schoemaker MJ, Simon M, Hoffmann P, Nöthen MM, Jöckel KH, Chanock S, Rajaraman P, Johansen C, Jenkins RB, Melin BS, Wrensch MR, Sanson M, Bondy ML, Turnbull C, Houlston RS.

Sci Rep. 2018 Feb 5;8(1):2339. doi: 10.1038/s41598-018-20844-w. Erratum in: Sci Rep. 2019 May 23;9(1):7924.

17.

PhenoRank: reducing study bias in gene prioritization through simulation.

Cornish AJ, David A, Sternberg MJE.

Bioinformatics. 2018 Jun 15;34(12):2087-2095. doi: 10.1093/bioinformatics/bty028.

18.

Assessment of T-cell receptor repertoire and clonal expansion in peripheral T-cell lymphoma using RNA-seq data.

Gong Q, Wang C, Zhang W, Iqbal J, Hu Y, Greiner TC, Cornish A, Kim JH, Rabadan R, Abate F, Wang X, Inghirami GG, McKeithan TW, Chan WC.

Sci Rep. 2017 Sep 12;7(1):11301. doi: 10.1038/s41598-017-11310-0.

19.

Correction: Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779.

Vieler A, Wu G, Tsai CH, Bullard B, Cornish AJ, Harvey C, Reca IB, Thornburg C, Achawanantakun R, Buehl CJ, Campbell MS, Cavalier D, Childs KL, Clark TJ, Deshpande R, Erickson E, Armenia Ferguson A, Handee W, Kong Q, Li X, Liu B, Lundback S, Peng C, Roston RL, Sanjaya, Simpson JP, TerBush A, Warakanont J, Zäuner S, Farre EM, Hegg EL, Jiang N, Kuo MH, Lu Y, Niyogi KK, Ohlrogge J, Osteryoung KW, Shachar-Hill Y, Sears BB, Sun Y, Takahashi H, Yandell M, Shiu SH, Benning C.

PLoS Genet. 2017 May 23;13(5):e1006802. doi: 10.1371/journal.pgen.1006802. eCollection 2017 May.

20.

What We Know about the Public's Level of Concern for Farm Animal Welfare in Food Production in Developed Countries.

Cornish A, Raubenheimer D, McGreevy P.

Animals (Basel). 2016 Nov 16;6(11). pii: E74. Review.

21.

Single-Amino Acid Modifications Reveal Additional Controls on the Proton Pathway of [FeFe]-Hydrogenase.

Cornish AJ, Ginovska B, Thelen A, da Silva JC, Soares TA, Raugei S, Dupuis M, Shaw WJ, Hegg EL.

Biochemistry. 2016 Jun 7;55(22):3165-73. doi: 10.1021/acs.biochem.5b01044. Epub 2016 May 27.

PMID:
27186945
22.

Career Preferences and Opinions on Animal Welfare and Ethics: A Survey of Veterinary Students in Australia and New Zealand.

Cornish AR, Caspar GL, Collins T, Degeling C, Fawcett A, Fisher AD, Freire R, Hazel SJ, Hood J, Johnson AJ, Lloyd J, Phillips CJ, Stafford K, Tzioumis V, McGreevy PD.

J Vet Med Educ. Fall 2016;43(3):310-20. doi: 10.3138/jvme.0615-091R2. Epub 2016 May 6.

PMID:
27153506
23.

Isotopic fractionation associated with [NiFe]- and [FeFe]-hydrogenases.

Yang H, Gandhi H, Cornish AJ, Moran JJ, Kreuzer HW, Ostrom NE, Hegg EL.

Rapid Commun Mass Spectrom. 2016 Jan 30;30(2):285-92.

PMID:
27071219
24.

Diagnostic and Biological Significance of KIR Expression Profile Determined by RNA-Seq in Natural Killer/T-Cell Lymphoma.

Küçük C, Hu X, Gong Q, Jiang B, Cornish A, Gaulard P, McKeithan T, Chan WC.

Am J Pathol. 2016 Jun;186(6):1435-41. doi: 10.1016/j.ajpath.2016.02.011. Epub 2016 Apr 7.

25.

Exome screening to identify loss-of-function mutations in the rhesus macaque for development of preclinical models of human disease.

Cornish AS, Gibbs RM, Norgren RB Jr.

BMC Genomics. 2016 Mar 2;17:170. doi: 10.1186/s12864-016-2509-5.

26.

PD-1 Blockade Expands Intratumoral Memory T Cells.

Ribas A, Shin DS, Zaretsky J, Frederiksen J, Cornish A, Avramis E, Seja E, Kivork C, Siebert J, Kaplan-Lefko P, Wang X, Chmielowski B, Glaspy JA, Tumeh PC, Chodon T, Pe'er D, Comin-Anduix B.

Cancer Immunol Res. 2016 Mar;4(3):194-203. doi: 10.1158/2326-6066.CIR-15-0210. Epub 2016 Jan 19.

27.

G-CSF and Neutrophils Are Nonredundant Mediators of Murine Experimental Autoimmune Uveoretinitis.

Goldberg GL, Cornish AL, Murphy J, Pang ES, Lim LL, Campbell IK, Scalzo-Inguanti K, Chen X, McMenamin PG, Maraskovsky E, McKenzie BS, Wicks IP.

Am J Pathol. 2016 Jan;186(1):172-84. doi: 10.1016/j.ajpath.2015.09.008.

PMID:
26718978
28.

A Comparison of Variant Calling Pipelines Using Genome in a Bottle as a Reference.

Cornish A, Guda C.

Biomed Res Int. 2015;2015:456479. doi: 10.1155/2015/456479. Epub 2015 Oct 11.

29.

Exploring the cellular basis of human disease through a large-scale mapping of deleterious genes to cell types.

Cornish AJ, Filippis I, David A, Sternberg MJ.

Genome Med. 2015 Sep 1;7:95. doi: 10.1186/s13073-015-0212-9.

30.

Synthesis and characterisation of halide, separated ion pair, and hydride cyclopentadienyl iron bis(diphenylphosphino)ethane derivatives.

Patel D, Wooles A, Cornish AD, Steven L, Davies ES, Evans DJ, McMaster J, Lewis W, Blake AJ, Liddle ST.

Dalton Trans. 2015 Aug 21;44(31):14159-77. doi: 10.1039/c5dt00704f.

PMID:
26185807
31.

Characterization of Hydrogen Metabolism in the Multicellular Green Alga Volvox carteri.

Cornish AJ, Green R, Gärtner K, Mason S, Hegg EL.

PLoS One. 2015 Apr 30;10(4):e0125324. doi: 10.1371/journal.pone.0125324. eCollection 2015.

32.

Activating mutations of STAT5B and STAT3 in lymphomas derived from γδ-T or NK cells.

Küçük C, Jiang B, Hu X, Zhang W, Chan JK, Xiao W, Lack N, Alkan C, Williams JC, Avery KN, Kavak P, Scuto A, Sen E, Gaulard P, Staudt L, Iqbal J, Zhang W, Cornish A, Gong Q, Yang Q, Sun H, d'Amore F, Leppä S, Liu W, Fu K, de Leval L, McKeithan T, Chan WC.

Nat Commun. 2015 Jan 14;6:6025. doi: 10.1038/ncomms7025.

PMID:
25586472
33.

A new rhesus macaque assembly and annotation for next-generation sequencing analyses.

Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Marçais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr.

Biol Direct. 2014 Oct 14;9(1):20. doi: 10.1186/1745-6150-9-20.

34.

SANTA: quantifying the functional content of molecular networks.

Cornish AJ, Markowetz F.

PLoS Comput Biol. 2014 Sep 11;10(9):e1003808. doi: 10.1371/journal.pcbi.1003808. eCollection 2014 Sep.

35.

Behavioural improvements and emotional gains for students attending an Australian School for Specific Purposes.

Hulme MJ, Cornish AM.

Clin Child Psychol Psychiatry. 2015 Oct;20(4):677-88. doi: 10.1177/1359104514547595. Epub 2014 Sep 2.

PMID:
25183418
36.

Searching for Animal Sentience: A Systematic Review of the Scientific Literature.

Proctor HS, Carder G, Cornish AR.

Animals (Basel). 2013 Sep 4;3(3):882-906. doi: 10.3390/ani3030882. Review.

37.

Genome, functional gene annotation, and nuclear transformation of the heterokont oleaginous alga Nannochloropsis oceanica CCMP1779.

Vieler A, Wu G, Tsai CH, Bullard B, Cornish AJ, Harvey C, Reca IB, Thornburg C, Achawanantakun R, Buehl CJ, Campbell MS, Cavalier D, Childs KL, Clark TJ, Deshpande R, Erickson E, Armenia Ferguson A, Handee W, Kong Q, Li X, Liu B, Lundback S, Peng C, Roston RL, Sanjaya, Simpson JP, Terbush A, Warakanont J, Zäuner S, Farre EM, Hegg EL, Jiang N, Kuo MH, Lu Y, Niyogi KK, Ohlrogge J, Osteryoung KW, Shachar-Hill Y, Sears BB, Sun Y, Takahashi H, Yandell M, Shiu SH, Benning C.

PLoS Genet. 2012;8(11):e1003064. doi: 10.1371/journal.pgen.1003064. Epub 2012 Nov 15. Erratum in: PLoS Genet. 2017 May 23;13(5):e1006802.

38.

HACE1 is a tumor suppressor gene candidate in natural killer cell neoplasms.

Küçük C, Hu X, Iqbal J, Gaulard P, Klinkebiel D, Cornish A, Dave BJ, Chan WC.

Am J Pathol. 2013 Jan;182(1):49-55. doi: 10.1016/j.ajpath.2012.09.012. Epub 2012 Nov 9.

39.

Navigating airport security with an insulin pump and/or sensor.

Cornish A, Chase HP.

Diabetes Technol Ther. 2012 Nov;14(11):984-5. doi: 10.1089/dia.2012.0220. Epub 2012 Oct 19. No abstract available.

PMID:
23083374
40.

Expression of Shewanella oneidensis MR-1 [FeFe]-hydrogenase genes in Anabaena sp. strain PCC 7120.

Gärtner K, Lechno-Yossef S, Cornish AJ, Wolk CP, Hegg EL.

Appl Environ Microbiol. 2012 Dec;78(24):8579-86. doi: 10.1128/AEM.01959-12. Epub 2012 Sep 28.

41.

The nature of unsupported uranium-ruthenium bonds: a combined experimental and theoretical study.

Gardner BM, Patel D, Cornish AD, McMaster J, Lewis W, Blake AJ, Liddle ST.

Chemistry. 2011 Sep 26;17(40):11266-73. doi: 10.1002/chem.201101394. Epub 2011 Aug 26.

PMID:
21922559
42.

Mechanism of proton transfer in [FeFe]-hydrogenase from Clostridium pasteurianum.

Cornish AJ, Gärtner K, Yang H, Peters JW, Hegg EL.

J Biol Chem. 2011 Nov 4;286(44):38341-7. doi: 10.1074/jbc.M111.254664. Epub 2011 Sep 7.

43.

On understanding proton transfer to the biocatalytic [Fe-Fe](H) sub-cluster in [Fe-Fe]H(2)ases: QM/MM MD simulations.

Hong G, Cornish AJ, Hegg EL, Pachter R.

Biochim Biophys Acta. 2011 May;1807(5):510-7. doi: 10.1016/j.bbabio.2011.01.011. Epub 2011 Feb 4.

44.

Interval training for patients with coronary artery disease: a systematic review.

Cornish AK, Broadbent S, Cheema BS.

Eur J Appl Physiol. 2011 Apr;111(4):579-89. doi: 10.1007/s00421-010-1682-5. Epub 2010 Oct 23. Review.

PMID:
20972578
45.

Changes in transcript abundance in Chlamydomonas reinhardtii following nitrogen deprivation predict diversion of metabolism.

Miller R, Wu G, Deshpande RR, Vieler A, Gärtner K, Li X, Moellering ER, Zäuner S, Cornish AJ, Liu B, Bullard B, Sears BB, Kuo MH, Hegg EL, Shachar-Hill Y, Shiu SH, Benning C.

Plant Physiol. 2010 Dec;154(4):1737-52. doi: 10.1104/pp.110.165159. Epub 2010 Oct 8.

46.

Regulation of interleukin-1beta by interferon-gamma is species specific, limited by suppressor of cytokine signalling 1 and influences interleukin-17 production.

Masters SL, Mielke LA, Cornish AL, Sutton CE, O'Donnell J, Cengia LH, Roberts AW, Wicks IP, Mills KH, Croker BA.

EMBO Rep. 2010 Aug;11(8):640-6. doi: 10.1038/embor.2010.93. Epub 2010 Jul 2.

47.

Short-term clinical and quality-of-life outcomes in women treated by the TVT-Secur procedure.

Lim JL, de Cuyper EM, Cornish A, Frazer M.

Aust N Z J Obstet Gynaecol. 2010 Apr;50(2):168-72. doi: 10.1111/j.1479-828X.2010.01139.x.

PMID:
20522075
48.

G-CSF and GM-CSF as therapeutic targets in rheumatoid arthritis.

Cornish AL, Campbell IK, McKenzie BS, Chatfield S, Wicks IP.

Nat Rev Rheumatol. 2009 Oct;5(10):554-9. doi: 10.1038/nrrheum.2009.178. Review.

PMID:
19798030
49.

Vaginal repair with mesh versus colporrhaphy for prolapse: a randomised controlled trial.

Carey M, Higgs P, Goh J, Lim J, Leong A, Krause H, Cornish A.

BJOG. 2009 Sep;116(10):1380-6. doi: 10.1111/j.1471-0528.2009.02254.x. Epub 2009 Jul 7.

50.

A global baseline for spawning aggregations of reef fishes.

Sadovy De Mitcheson Y, Cornish A, Domeier M, Colin PL, Russell M, Lindeman KC.

Conserv Biol. 2008 Oct;22(5):1233-44. doi: 10.1111/j.1523-1739.2008.01020.x. Epub 2008 Aug 19.

PMID:
18717693

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