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Items: 49

1.

Dynamics of impurity clustering in superfluid 4He nanodroplets.

Coppens F, Ancilotto F, Barranco M, Halberstadt N, Pi M.

Phys Chem Chem Phys. 2019 Aug 21;21(31):17423-17432. doi: 10.1039/c9cp02789k. Epub 2019 Jul 30.

PMID:
31359015
2.

From invisibility to readability: Recovering the ink of Herculaneum.

Parker CS, Parsons S, Bandy J, Chapman C, Coppens F, Seales WB.

PLoS One. 2019 May 8;14(5):e0215775. doi: 10.1371/journal.pone.0215775. eCollection 2019.

3.

Multifaceted activity of cytokinin in leaf development shapes its size and structure in Arabidopsis.

Skalák J, Vercruyssen L, Claeys H, Hradilová J, Černý M, Novák O, Plačková L, Saiz-Fernández I, Skaláková P, Coppens F, Dhondt S, Koukalová Š, Zouhar J, Inzé D, Brzobohatý B.

Plant J. 2019 Mar;97(5):805-824. doi: 10.1111/tpj.14285.

PMID:
30748050
4.

4s to 5s and 4p photoexcitation dynamics of K atoms from the surface of helium nanodroplets: a theoretical study.

Martinez M, Coppens F, Barranco M, Halberstadt N, Pi M.

Phys Chem Chem Phys. 2019 Feb 13;21(7):3626-3636. doi: 10.1039/c8cp05253k.

PMID:
30379151
5.

Priming of Plant Growth Promotion by Volatiles of Root-Associated Microbacterium spp.

Cordovez V, Schop S, Hordijk K, Dupré de Boulois H, Coppens F, Hanssen I, Raaijmakers JM, Carrión VJ.

Appl Environ Microbiol. 2018 Oct 30;84(22). pii: e01865-18. doi: 10.1128/AEM.01865-18. Print 2018 Nov 15.

6.

Hop-family Helicobacter outer membrane adhesins form a novel class of Type 5-like secretion proteins with an interrupted β-barrel domain.

Coppens F, Castaldo G, Debraekeleer A, Subedi S, Moonens K, Lo A, Remaut H.

Mol Microbiol. 2018 Oct;110(1):33-46. doi: 10.1111/mmi.14075. Epub 2018 Sep 28.

PMID:
29995350
7.

Desorption dynamics of RbHe exciplexes off He nanodroplets induced by spin-relaxation.

Coppens F, von Vangerow J, Barranco M, Halberstadt N, Stienkemeier F, Pi M, Mudrich M.

Phys Chem Chem Phys. 2018 Apr 4;20(14):9309-9320. doi: 10.1039/C8CP00482J.

PMID:
29564442
8.

PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics.

Van Bel M, Diels T, Vancaester E, Kreft L, Botzki A, Van de Peer Y, Coppens F, Vandepoele K.

Nucleic Acids Res. 2018 Jan 4;46(D1):D1190-D1196. doi: 10.1093/nar/gkx1002.

9.

The TriForC database: a comprehensive up-to-date resource of plant triterpene biosynthesis.

Miettinen K, Iñigo S, Kreft L, Pollier J, De Bo C, Botzki A, Coppens F, Bak S, Goossens A.

Nucleic Acids Res. 2018 Jan 4;46(D1):D586-D594. doi: 10.1093/nar/gkx925.

10.

Capture of Xe and Ar atoms by quantized vortices in 4He nanodroplets.

Coppens F, Ancilotto F, Barranco M, Halberstadt N, Pi M.

Phys Chem Chem Phys. 2017 Sep 20;19(36):24805-24818. doi: 10.1039/c7cp03307a.

PMID:
28868543
11.

The reduction in maize leaf growth under mild drought affects the transition between cell division and cell expansion and cannot be restored by elevated gibberellic acid levels.

Nelissen H, Sun XH, Rymen B, Jikumaru Y, Kojima M, Takebayashi Y, Abbeloos R, Demuynck K, Storme V, Vuylsteke M, De Block J, Herman D, Coppens F, Maere S, Kamiya Y, Sakakibara H, Beemster GTS, Inzé D.

Plant Biotechnol J. 2018 Feb;16(2):615-627. doi: 10.1111/pbi.12801. Epub 2017 Sep 4.

12.

Plant-RRBS, a bisulfite and next-generation sequencing-based methylome profiling method enriching for coverage of cytosine positions.

Schmidt M, Van Bel M, Woloszynska M, Slabbinck B, Martens C, De Block M, Coppens F, Van Lijsebettens M.

BMC Plant Biol. 2017 Jul 6;17(1):115. doi: 10.1186/s12870-017-1070-y.

13.

PhyD3: a phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization.

Kreft L, Botzki A, Coppens F, Vandepoele K, Van Bel M.

Bioinformatics. 2017 Sep 15;33(18):2946-2947. doi: 10.1093/bioinformatics/btx324.

PMID:
28525531
14.

Proteome Profiling of Wheat Shoots from Different Cultivars.

Vu LD, Verstraeten I, Stes E, Van Bel M, Coppens F, Gevaert K, De Smet I.

Front Plant Sci. 2017 Mar 13;8:332. doi: 10.3389/fpls.2017.00332. eCollection 2017.

15.

Imaging Excited-State Dynamics of Doped He Nanodroplets in Real-Time.

von Vangerow J, Coppens F, Leal A, Pi M, Barranco M, Halberstadt N, Stienkemeier F, Mudrich M.

J Phys Chem Lett. 2017 Jan 5;8(1):307-312. doi: 10.1021/acs.jpclett.6b02598. Epub 2016 Dec 22.

PMID:
27996261
16.

Exploring Plant Co-Expression and Gene-Gene Interactions with CORNET 3.0.

Van Bel M, Coppens F.

Methods Mol Biol. 2017;1533:201-212.

PMID:
27987172
17.

Natural Variation of Molecular and Morphological Gibberellin Responses.

Nam YJ, Herman D, Blomme J, Chae E, Kojima M, Coppens F, Storme V, Van Daele T, Dhondt S, Sakakibara H, Weigel D, Inzé D, Gonzalez N.

Plant Physiol. 2017 Jan;173(1):703-714. doi: 10.1104/pp.16.01626. Epub 2016 Nov 22.

18.

Leaf Growth Response to Mild Drought: Natural Variation in Arabidopsis Sheds Light on Trait Architecture.

Clauw P, Coppens F, Korte A, Herman D, Slabbinck B, Dhondt S, Van Daele T, De Milde L, Vermeersch M, Maleux K, Maere S, Gonzalez N, Inzé D.

Plant Cell. 2016 Oct;28(10):2417-2434. Epub 2016 Oct 11.

19.

Up-to-Date Workflow for Plant (Phospho)proteomics Identifies Differential Drought-Responsive Phosphorylation Events in Maize Leaves.

Vu LD, Stes E, Van Bel M, Nelissen H, Maddelein D, Inzé D, Coppens F, Martens L, Gevaert K, De Smet I.

J Proteome Res. 2016 Dec 2;15(12):4304-4317. Epub 2016 Oct 4.

PMID:
27643528
20.

Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.

Moonens K, Gideonsson P, Subedi S, Bugaytsova J, Romaõ E, Mendez M, Nordén J, Fallah M, Rakhimova L, Shevtsova A, Lahmann M, Castaldo G, Brännström K, Coppens F, Lo AW, Ny T, Solnick JV, Vandenbussche G, Oscarson S, Hammarström L, Arnqvist A, Berg DE, Muyldermans S, Borén T, Remaut H.

Cell Host Microbe. 2016 Jan 13;19(1):55-66. doi: 10.1016/j.chom.2015.12.004.

21.

Combined Large-Scale Phenotyping and Transcriptomics in Maize Reveals a Robust Growth Regulatory Network.

Baute J, Herman D, Coppens F, De Block J, Slabbinck B, Dell'Acqua M, Pè ME, Maere S, Nelissen H, Inzé D.

Plant Physiol. 2016 Mar;170(3):1848-67. doi: 10.1104/pp.15.01883. Epub 2016 Jan 11.

22.

It's Time for Some "Site"-Seeing: Novel Tools to Monitor the Ubiquitin Landscape in Arabidopsis thaliana.

Walton A, Stes E, Cybulski N, Van Bel M, Iñigo S, Durand AN, Timmerman E, Heyman J, Pauwels L, De Veylder L, Goossens A, De Smet I, Coppens F, Goormachtig S, Gevaert K.

Plant Cell. 2016 Jan;28(1):6-16. doi: 10.1105/tpc.15.00878. Epub 2016 Jan 7. Review.

23.

Tools and data services registry: a community effort to document bioinformatics resources.

Ison J, Rapacki K, Ménager H, Kalaš M, Rydza E, Chmura P, Anthon C, Beard N, Berka K, Bolser D, Booth T, Bretaudeau A, Brezovsky J, Casadio R, Cesareni G, Coppens F, Cornell M, Cuccuru G, Davidsen K, Vedova GD, Dogan T, Doppelt-Azeroual O, Emery L, Gasteiger E, Gatter T, Goldberg T, Grosjean M, Grüning B, Helmer-Citterich M, Ienasescu H, Ioannidis V, Jespersen MC, Jimenez R, Juty N, Juvan P, Koch M, Laibe C, Li JW, Licata L, Mareuil F, Mičetić I, Friborg RM, Moretti S, Morris C, Möller S, Nenadic A, Peterson H, Profiti G, Rice P, Romano P, Roncaglia P, Saidi R, Schafferhans A, Schwämmle V, Smith C, Sperotto MM, Stockinger H, Vařeková RS, Tosatto SC, de la Torre V, Uva P, Via A, Yachdav G, Zambelli F, Vriend G, Rost B, Parkinson H, Løngreen P, Brunak S.

Nucleic Acids Res. 2016 Jan 4;44(D1):D38-47. doi: 10.1093/nar/gkv1116. Epub 2015 Nov 3.

24.

A Conserved Core of Programmed Cell Death Indicator Genes Discriminates Developmentally and Environmentally Induced Programmed Cell Death in Plants.

Olvera-Carrillo Y, Van Bel M, Van Hautegem T, Fendrych M, Huysmans M, Simaskova M, van Durme M, Buscaill P, Rivas S, Coll NS, Coppens F, Maere S, Nowack MK.

Plant Physiol. 2015 Dec;169(4):2684-99. doi: 10.1104/pp.15.00769. Epub 2015 Oct 5.

25.

Correlation analysis of the transcriptome of growing leaves with mature leaf parameters in a maize RIL population.

Baute J, Herman D, Coppens F, De Block J, Slabbinck B, Dell'Acqua M, Pè ME, Maere S, Nelissen H, Inzé D.

Genome Biol. 2015 Sep 11;16:168. doi: 10.1186/s13059-015-0735-9.

26.

Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays.

Dell'Acqua M, Gatti DM, Pea G, Cattonaro F, Coppens F, Magris G, Hlaing AL, Aung HH, Nelissen H, Baute J, Frascaroli E, Churchill GA, Inzé D, Morgante M, Pè ME.

Genome Biol. 2015 Sep 11;16:167. doi: 10.1186/s13059-015-0716-z.

27.

Structural and adhesive properties of the long polar fimbriae protein LpfD from adherent-invasive Escherichia coli.

Coppens F, Iyyathurai J, Ruer S, Fioravanti A, Taganna J, Vereecke L, De Greve H, Remaut H.

Acta Crystallogr D Biol Crystallogr. 2015 Aug;71(Pt 8):1615-26. doi: 10.1107/S1399004715009803. Epub 2015 Jul 28.

PMID:
26249343
28.

Leaf responses to mild drought stress in natural variants of Arabidopsis.

Clauw P, Coppens F, De Beuf K, Dhondt S, Van Daele T, Maleux K, Storme V, Clement L, Gonzalez N, Inzé D.

Plant Physiol. 2015 Mar;167(3):800-16. doi: 10.1104/pp.114.254284. Epub 2015 Jan 20. Erratum in: Plant Physiol. 2015 Jul;168(3):1180.

29.

High-resolution time-resolved imaging of in vitro Arabidopsis rosette growth.

Dhondt S, Gonzalez N, Blomme J, De Milde L, Van Daele T, Van Akoleyen D, Storme V, Coppens F, T S Beemster G, Inzé D.

Plant J. 2014 Oct;80(1):172-84. doi: 10.1111/tpj.12610. Epub 2014 Aug 25.

30.

Combining growth-promoting genes leads to positive epistasis in Arabidopsis thaliana.

Vanhaeren H, Gonzalez N, Coppens F, De Milde L, Van Daele T, Vermeersch M, Eloy NB, Storme V, Inzé D.

Elife. 2014 Apr 29;3:e02252. doi: 10.7554/eLife.02252.

31.

ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development.

Vercruyssen L, Verkest A, Gonzalez N, Heyndrickx KS, Eeckhout D, Han SK, Jégu T, Archacki R, Van Leene J, Andriankaja M, De Bodt S, Abeel T, Coppens F, Dhondt S, De Milde L, Vermeersch M, Maleux K, Gevaert K, Jerzmanowski A, Benhamed M, Wagner D, Vandepoele K, De Jaeger G, Inzé D.

Plant Cell. 2014 Jan;26(1):210-29. doi: 10.1105/tpc.113.115907. Epub 2014 Jan 17.

32.

Kinematic analysis of cell division in leaves of mono- and dicotyledonous species: a basis for understanding growth and developing refined molecular sampling strategies.

Nelissen H, Rymen B, Coppens F, Dhondt S, Fiorani F, Beemster GT.

Methods Mol Biol. 2013;959:247-64. doi: 10.1007/978-1-62703-221-6_17.

PMID:
23299681
33.

Brassinosteroid production and signaling differentially control cell division and expansion in the leaf.

Zhiponova MK, Vanhoutte I, Boudolf V, Betti C, Dhondt S, Coppens F, Mylle E, Maes S, González-García MP, Caño-Delgado AI, Inzé D, Beemster GT, De Veylder L, Russinova E.

New Phytol. 2013 Jan;197(2):490-502. doi: 10.1111/nph.12036. Epub 2012 Nov 28.

34.

Exit from proliferation during leaf development in Arabidopsis thaliana: a not-so-gradual process.

Andriankaja M, Dhondt S, De Bodt S, Vanhaeren H, Coppens F, De Milde L, Mühlenbock P, Skirycz A, Gonzalez N, Beemster GT, Inzé D.

Dev Cell. 2012 Jan 17;22(1):64-78. doi: 10.1016/j.devcel.2011.11.011. Epub 2012 Jan 5.

35.

The plant-specific family of DNA-binding proteins containing three HMG-box domains interacts with mitotic and meiotic chromosomes.

Pedersen DS, Coppens F, Ma L, Antosch M, Marktl B, Merkle T, Beemster GT, Houben A, Grasser KD.

New Phytol. 2011 Nov;192(3):577-89. doi: 10.1111/j.1469-8137.2011.03828.x. Epub 2011 Jul 22.

36.

Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis.

Vanneste S, Coppens F, Lee E, Donner TJ, Xie Z, Van Isterdael G, Dhondt S, De Winter F, De Rybel B, Vuylsteke M, De Veylder L, Friml J, Inzé D, Grotewold E, Scarpella E, Sack F, Beemster GT, Beeckman T.

EMBO J. 2011 Jul 19;30(16):3430-41. doi: 10.1038/emboj.2011.240.

37.

Low magnesium status in plants enhances tolerance to cadmium exposure.

Hermans C, Chen J, Coppens F, Inzé D, Verbruggen N.

New Phytol. 2011 Oct;192(2):428-36. doi: 10.1111/j.1469-8137.2011.03814.x. Epub 2011 Jul 18.

38.

Pause-and-stop: the effects of osmotic stress on cell proliferation during early leaf development in Arabidopsis and a role for ethylene signaling in cell cycle arrest.

Skirycz A, Claeys H, De Bodt S, Oikawa A, Shinoda S, Andriankaja M, Maleux K, Eloy NB, Coppens F, Yoo SD, Saito K, Inzé D.

Plant Cell. 2011 May;23(5):1876-88. doi: 10.1105/tpc.111.084160. Epub 2011 May 10.

39.

SHORT-ROOT and SCARECROW regulate leaf growth in Arabidopsis by stimulating S-phase progression of the cell cycle.

Dhondt S, Coppens F, De Winter F, Swarup K, Merks RM, Inzé D, Bennett MJ, Beemster GT.

Plant Physiol. 2010 Nov;154(3):1183-95. doi: 10.1104/pp.110.158857. Epub 2010 Aug 25.

40.

Kinematic analysis of cell division and expansion.

Rymen B, Coppens F, Dhondt S, Fiorani F, Beemster GT.

Methods Mol Biol. 2010;655:203-27. doi: 10.1007/978-1-60761-765-5_14.

PMID:
20734263
41.

Systems analysis of the responses to long-term magnesium deficiency and restoration in Arabidopsis thaliana.

Hermans C, Vuylsteke M, Coppens F, Cristescu SM, Harren FJ, Inzé D, Verbruggen N.

New Phytol. 2010 Jul;187(1):132-44. doi: 10.1111/j.1469-8137.2010.03257.x. Epub 2010 Apr 20.

42.

Early transcriptomic changes induced by magnesium deficiency in Arabidopsis thaliana reveal the alteration of circadian clock gene expression in roots and the triggering of abscisic acid-responsive genes.

Hermans C, Vuylsteke M, Coppens F, Craciun A, Inzé D, Verbruggen N.

New Phytol. 2010 Jul;187(1):119-31. doi: 10.1111/j.1469-8137.2010.03258.x. Epub 2010 Apr 16.

43.

Gibberellin signaling controls cell proliferation rate in Arabidopsis.

Achard P, Gusti A, Cheminant S, Alioua M, Dhondt S, Coppens F, Beemster GT, Genschik P.

Curr Biol. 2009 Jul 28;19(14):1188-93. doi: 10.1016/j.cub.2009.05.059. Epub 2009 Jul 2.

44.

The Arabidopsis anaphase promoting complex (APC): regulation through subunit availability in plant tissues.

Eloy NB, Coppens F, Beemster GT, Hemerly AS, Ferreira PC.

Cell Cycle. 2006 Sep;5(17):1957-65. Epub 2006 Sep 1.

PMID:
16940752
45.

Crystallization of the FaeE chaperone of Escherichia coli F4 fimbriae.

Van Molle I, Buts L, Coppens F, Qiang L, Wyns L, Loris R, Bouckaert J, De Greve H.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Apr 1;61(Pt 4):427-31. Epub 2005 Apr 1.

46.

Potential nitrification rate as a tool for screening toxicity in metal-contaminated soils.

Smolders E, Brans K, Coppens F, Merckx R.

Environ Toxicol Chem. 2001 Nov;20(11):2469-74.

PMID:
11699771
47.

Diagnosis and differential diagnosis of branchial cleft cysts by CT scan.

Coppens F, Peene P, Lemahieu SF.

J Belge Radiol. 1990 Jun;73(3):189-96.

PMID:
2380154
48.

[Pheochromocytoma revealed by pulmonary edema].

Coppens F, Tsicopoulos A, Marquette CH, Proye C, Wallaert B, Tonnel AB.

Rev Mal Respir. 1989;6(5):457-9. French.

PMID:
2602619
49.

Pneumatocele in a traumatic ruptured lacrimal sac mucocele.

Casselman JW, Peene PT, Coppens F, Vanneste F.

Rofo. 1989 Jan;150(1):106-7. No abstract available.

PMID:
2536488

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