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High mobility group A1 (HMGA1) protein and gene expression correlate with ER-negativity and poor outcomes in breast cancer.

Gorbounov M, Carleton NM, Asch-Kendrick RJ, Xian L, Rooper L, Chia L, Cimino-Mathews A, Cope L, Meeker A, Stearns V, Veltri RW, Bae YK, Resar LMS.

Breast Cancer Res Treat. 2019 Sep 17. doi: 10.1007/s10549-019-05419-1. [Epub ahead of print]


Genome-wide investigation of intragenic DNA methylation identifies ZMIZ1 gene as a prognostic marker in glioblastoma and multiple cancer types.

Mathios D, Hwang T, Xia Y, Phallen J, Rui Y, See AP, Maxwell R, Belcaid Z, Casaos J, Burger PC, McDonald KL, Gallia GL, Cope L, Kai M, Brem H, Pardoll DM, Ha P, Green JJ, Velculescu VE, Bettegowda C, Park CK, Lim M.

Int J Cancer. 2019 Aug 2. doi: 10.1002/ijc.32587. [Epub ahead of print]


Frontostriatal Resting State Functional Connectivity in Resilient and Non-Resilient Adolescents with a Family History of Alcohol Use Disorder.

Martz ME, Cope LM, Hardee JE, Brislin SJ, Weigard A, Zucker RA, Heitzeg MM.

J Child Adolesc Psychopharmacol. 2019 Aug;29(7):508-515. doi: 10.1089/cap.2018.0169. Epub 2019 Aug 1.


Clinicopathologic and Molecular Features of Paired Cases of Metachronous Ovarian Serous Borderline Tumor and Subsequent Serous Carcinoma.

Chui MH, Xing D, Zeppernick F, Wang ZQ, Hannibal CG, Frederiksen K, Kjaer SK, Cope L, Kurman RJ, Shih IM, Wang TL, Vang R.

Am J Surg Pathol. 2019 Jul 23. doi: 10.1097/PAS.0000000000001325. [Epub ahead of print]


Impact of Extent of Resection on Incidence of Postoperative Complications in Patients With Glioblastoma.

Laurent D, Freedman R, Cope L, Sacks P, Abbatematteo J, Kubilis P, Bova F, Rahman M.

Neurosurgery. 2019 Jul 25. pii: nyz313. doi: 10.1093/neuros/nyz313. [Epub ahead of print]


DNA Methylation Markers for Breast Cancer Detection in the Developing World.

Downs B, Mercado-Rodriguez C, Cimino-Mathews A, Chen C, Yuan J, Van Den Berg EJ, Cope L, Schmitt F, Tse GM, Ali SZ, Meir-Levi D, Sood R, Li J, Richardson AL, Mosunjac M, Rizzo M, Tulac S, Kocmond K, de Guzman TN, Lai EW, Rhees B, Bates M, Wolff AC, Gabrielson E, Harvey S, Umbricht CB, Visvanathan K, Fackler MJ, Sukumar S.

Clin Cancer Res. 2019 Jul 12. pii: clincanres.3277.2018. doi: 10.1158/1078-0432.CCR-18-3277. [Epub ahead of print]


Multiple ventricular bands and the associated trabecula septomarginalis dextra in the right ventricle of the domestic dog (Canis familiaris).

Cope LA.

Anat Histol Embryol. 2019 Sep;48(5):397-403. doi: 10.1111/ahe.12451. Epub 2019 Jun 25.


An exploration of the perceptions of non-medical prescribers, regarding their self-efficacy when prescribing, and their willingness to take responsibility for prescribing decisions.

Cope LC, Tully MP, Hall J.

Res Social Adm Pharm. 2019 May 22. pii: S1551-7411(18)30587-4. doi: 10.1016/j.sapharm.2019.05.013. [Epub ahead of print]


DNA methylation genome-wide analysis in remnant and primary gastric cancers.

Sugimoto K, Ito T, Hulbert A, Chen C, Orita H, Maeda M, Moro H, Fukagawa T, Ushijima T, Katai H, Wada R, Sato K, Sakamoto K, Yu W, Considine M, Cope L, Brock MV.

Gastric Cancer. 2019 Mar 12. doi: 10.1007/s10120-019-00949-5. [Epub ahead of print]


Correction to: persistent mutant oncogene specific T cells in two patients benefitting from anti-PD-1.

Smith KN, Llosa NJ, Cottrell TR, Siegel N, Fan H, Suri P, Chan HY, Guo H, Oke T, Awan AH, Verde F, Danilova L, Anagnostou V, Tam AJ, Luber BS, Bartlett BR, Aulakh LK, Sidhom JW, Zhu Q, Sears CL, Cope L, Sharfman WH, Thompson ED, Riemer J, Marrone KA, Naidoo J, Velculescu VE, Forde PM, Vogelstein B, Kinzler KW, Papadopoulos N, Durham JN, Wang H, Le DT, Justesen S, Taube JM, Diaz LA Jr, Brahmer JR, Pardoll DM, Anders RA, Housseau F.

J Immunother Cancer. 2019 Mar 6;7(1):63. doi: 10.1186/s40425-019-0547-7.


Measuring DNA Copy Number Variation Using High-Density Methylation Microarrays.

Cho S, Kim HS, Zeiger MA, Umbricht CB, Cope LM.

J Comput Biol. 2019 Apr;26(4):295-304. doi: 10.1089/cmb.2018.0143. Epub 2019 Feb 21.


Persistent mutant oncogene specific T cells in two patients benefitting from anti-PD-1.

Smith KN, Llosa NJ, Cottrell TR, Siegel N, Fan H, Suri P, Chan HY, Guo H, Oke T, Awan AH, Verde F, Danilova L, Anagnostou V, Tam AJ, Luber BS, Bartlett BR, Aulakh LK, Sidhom JW, Zhu Q, Sears CL, Cope L, Sharfman WH, Thompson ED, Riemer J, Marrone KA, Naidoo J, Velculescu VE, Forde PM, Vogelstein B, Kinzler KW, Papadopoulos N, Durham JN, Wang H, Le DT, Justesen S, Taube JM, Diaz LA Jr, Brahmer JR, Pardoll DM, Anders RA, Housseau F.

J Immunother Cancer. 2019 Feb 11;7(1):40. doi: 10.1186/s40425-018-0492-x. Erratum in: J Immunother Cancer. 2019 Mar 6;7(1):63.


Childhood adversity, externalizing behavior, and substance use in adolescence: Mediating effects of anterior cingulate cortex activation during inhibitory errors.

Fava NM, Trucco EM, Martz ME, Cope LM, Jester JM, Zucker RA, Heitzeg MM.

Dev Psychopathol. 2019 Oct;31(4):1439-1450. doi: 10.1017/S0954579418001025.


Induction of cell cycle arrest and inflammatory genes by combined treatment with epigenetic, differentiating, and chemotherapeutic agents in triple-negative breast cancer.

Merino VF, Cho S, Nguyen N, Sadik H, Narayan A, Talbot C Jr, Cope L, Zhou XC, Zhang Z, Győrffy B, Sukumar S.

Breast Cancer Res. 2018 Nov 28;20(1):145. doi: 10.1186/s13058-018-1068-x.


Reward activation in childhood predicts adolescent substance use initiation in a high-risk sample.

Cope LM, Martz ME, Hardee JE, Zucker RA, Heitzeg MM.

Drug Alcohol Depend. 2019 Jan 1;194:318-325. doi: 10.1016/j.drugalcdep.2018.11.003. Epub 2018 Nov 15.


Young age at diagnosis is associated with worse prognosis in the Luminal A breast cancer subtype: a retrospective institutional cohort study.

Liu Z, Sahli Z, Wang Y, Wolff AC, Cope LM, Umbricht CB.

Breast Cancer Res Treat. 2018 Dec;172(3):689-702. doi: 10.1007/s10549-018-4950-4. Epub 2018 Sep 17.


Methylomic Analysis of Ovarian Cancers Identifies Tumor-Specific Alterations Readily Detectable in Early Precursor Lesions.

Pisanic TR 2nd, Cope LM, Lin SF, Yen TT, Athamanolap P, Asaka R, Nakayama K, Fader AN, Wang TH, Shih IM, Wang TL.

Clin Cancer Res. 2018 Dec 15;24(24):6536-6547. doi: 10.1158/1078-0432.CCR-18-1199. Epub 2018 Aug 14.


Comparative effects of the Mandibular Protraction Appliance in adolescents and adults.

Furquim BD, Janson G, Cope LCC, Freitas KMS, Henriques JFC.

Dental Press J Orthod. 2018 May-Jun;23(3):63-72. doi: 10.1590/2177-6709.23.3.063-072.oar.


The Mutation-Associated Neoantigen Functional Expansion of Specific T Cells (MANAFEST) Assay: A Sensitive Platform for Monitoring Antitumor Immunity.

Danilova L, Anagnostou V, Caushi JX, Sidhom JW, Guo H, Chan HY, Suri P, Tam A, Zhang J, Asmar ME, Marrone KA, Naidoo J, Brahmer JR, Forde PM, Baras AS, Cope L, Velculescu VE, Pardoll DM, Housseau F, Smith KN.

Cancer Immunol Res. 2018 Aug;6(8):888-899. doi: 10.1158/2326-6066.CIR-18-0129. Epub 2018 Jun 12.


Brain Activity, Low Self-Control, and Delinquency: An fMRI Study of At-Risk Adolescents.

Meldrum RC, Trucco EM, Cope LM, Zucker RA, Heitzeg MM.

J Crim Justice. 2018 May-Jun;56:107-117. doi: 10.1016/j.jcrimjus.2017.07.007. Epub 2017 Jul 20.


A Standardized Needs Assessment Tool to Inform the Curriculum Development Process for Pediatric Resuscitation Simulation-Based Education in Resource-Limited Settings.

Shilkofski N, Crichlow A, Rice J, Cope L, Kyaw YM, Mon T, Kiguli S, Jung J.

Front Pediatr. 2018 Feb 28;6:37. doi: 10.3389/fped.2018.00037. eCollection 2018.


Pathways to Youth Behavior: The Role of Genetic, Neural, and Behavioral Markers.

Trucco EM, Cope LM, Burmeister M, Zucker RA, Heitzeg MM.

J Res Adolesc. 2018 Mar;28(1):26-39. doi: 10.1111/jora.12341.


Re: RCR audit of compliance with UK guidelines for the prevention and detection of acute kidney injury in adult patients undergoing iodinated contrast media injections for CT. A reply.

Cope LH, Drinkwater KJ, Howlett DC.

Clin Radiol. 2018 Apr;73(4):389-390. doi: 10.1016/j.crad.2018.01.004. Epub 2018 Feb 16. No abstract available.


Do End-of-Rotation and End-of-Shift Assessments Inform Clinical Competency Committees' (CCC) Decisions?

Regan L, Cope L, Omron R, Bright L, Bayram JD.

West J Emerg Med. 2018 Jan;19(1):121-127. doi: 10.5811/westjem.2017.10.35290. Epub 2017 Dec 13.


Callous-Unemotional Traits Modulate Brain Drug Craving Response in High-Risk Young Offenders.

Vincent GM, Cope LM, King J, Nyalakanti P, Kiehl KA.

J Abnorm Child Psychol. 2018 Jul;46(5):993-1009. doi: 10.1007/s10802-017-0364-8.


Concurrent and developmental correlates of psychopathic traits using a triarchic psychopathy model approach.

Dotterer HL, Waller R, Cope LM, Hicks BM, Nigg JT, Zucker RA, Hyde LW.

J Abnorm Psychol. 2017 Oct;126(7):859-876. doi: 10.1037/abn0000302.


Molecular analysis of high-grade serous ovarian carcinoma with and without associated serous tubal intra-epithelial carcinoma.

Ducie J, Dao F, Considine M, Olvera N, Shaw PA, Kurman RJ, Shih IM, Soslow RA, Cope L, Levine DA.

Nat Commun. 2017 Oct 17;8(1):990. doi: 10.1038/s41467-017-01217-9.


RCR audit of compliance with UK guidelines for the prevention and detection of acute kidney injury in adult patients undergoing iodinated contrast media injections for CT.

Cope LH, Drinkwater KJ, Howlett DC.

Clin Radiol. 2017 Dec;72(12):1047-1052. doi: 10.1016/j.crad.2017.07.002. Epub 2017 Aug 23.


Morphology and Classification of Right Ventricular Bands in the Domestic Dog (Canis familiaris).

Cope LA.

Anat Histol Embryol. 2017 Oct;46(5):464-473. doi: 10.1111/ahe.12291. Epub 2017 Aug 9.


Mismatch repair deficiency predicts response of solid tumors to PD-1 blockade.

Le DT, Durham JN, Smith KN, Wang H, Bartlett BR, Aulakh LK, Lu S, Kemberling H, Wilt C, Luber BS, Wong F, Azad NS, Rucki AA, Laheru D, Donehower R, Zaheer A, Fisher GA, Crocenzi TS, Lee JJ, Greten TF, Duffy AG, Ciombor KK, Eyring AD, Lam BH, Joe A, Kang SP, Holdhoff M, Danilova L, Cope L, Meyer C, Zhou S, Goldberg RM, Armstrong DK, Bever KM, Fader AN, Taube J, Housseau F, Spetzler D, Xiao N, Pardoll DM, Papadopoulos N, Kinzler KW, Eshleman JR, Vogelstein B, Anders RA, Diaz LA Jr.

Science. 2017 Jul 28;357(6349):409-413. doi: 10.1126/science.aan6733. Epub 2017 Jun 8.


HMGA1 amplifies Wnt signalling and expands the intestinal stem cell compartment and Paneth cell niche.

Xian L, Georgess D, Huso T, Cope L, Belton A, Chang YT, Kuang W, Gu Q, Zhang X, Senger S, Fasano A, Huso DL, Ewald AJ, Resar LMS.

Nat Commun. 2017 Apr 28;8:15008. doi: 10.1038/ncomms15008.


Inhibiting DNA Methylation Causes an Interferon Response in Cancer via dsRNA Including Endogenous Retroviruses.

Chiappinelli KB, Strissel PL, Desrichard A, Li H, Henke C, Akman B, Hein A, Rote NS, Cope LM, Snyder A, Makarov V, Budhu S, Slamon DJ, Wolchok JD, Pardoll DM, Beckmann MW, Zahnow CA, Merghoub T, Chan TA, Baylin SB, Strick R.

Cell. 2017 Apr 6;169(2):361. doi: 10.1016/j.cell.2017.03.036. No abstract available.


Sex differences in the development of emotion circuitry in adolescents at risk for substance abuse: a longitudinal fMRI study.

Hardee JE, Cope LM, Munier EC, Welsh RC, Zucker RA, Heitzeg MM.

Soc Cogn Affect Neurosci. 2017 Jun 1;12(6):965-975. doi: 10.1093/scan/nsx021.


Effects of the serotonin transporter gene, sensitivity of response to alcohol, and parental monitoring on risk for problem alcohol use.

Cope LM, Munier EC, Trucco EM, Hardee JE, Burmeister M, Zucker RA, Heitzeg MM.

Alcohol. 2017 Mar;59:7-16. doi: 10.1016/j.alcohol.2016.12.001. Epub 2016 Dec 6.


Health care professionals' perceptions of a community based 'virtual ward' medicines management service: A qualitative study.

Kirkcaldy A, Jack BA, Cope LC.

Res Social Adm Pharm. 2018 Jan;14(1):69-75. doi: 10.1016/j.sapharm.2017.02.001. Epub 2017 Feb 3.


Transcriptional Mechanisms of Resistance to Anti-PD-1 Therapy.

Ascierto ML, Makohon-Moore A, Lipson EJ, Taube JM, McMiller TL, Berger AE, Fan J, Kaunitz GJ, Cottrell TR, Kohutek ZA, Favorov A, Makarov V, Riaz N, Chan TA, Cope L, Hruban RH, Pardoll DM, Taylor BS, Solit DB, Iacobuzio-Donahue CA, Topalian SL.

Clin Cancer Res. 2017 Jun 15;23(12):3168-3180. doi: 10.1158/1078-0432.CCR-17-0270. Epub 2017 Feb 13.


Price Transparency in Primary Care: Can Patients Learn About Costs When Scheduling an Appointment?

Saloner B, Cope LC, Hempstead K, Rhodes KV, Polsky D, Kenney GM.

J Gen Intern Med. 2017 Jul;32(7):815-821. doi: 10.1007/s11606-017-4003-4. Epub 2017 Feb 6.


Reduced brain activation during inhibitory control in children with COMT Val/Val genotype.

Cope LM, Hardee JE, Soules ME, Burmeister M, Zucker RA, Heitzeg MM.

Brain Behav. 2016 Oct 5;6(12):e00577. doi: 10.1002/brb3.577. eCollection 2016 Dec.


Optimizing the Use of Gene Expression Profiling in Early-Stage Breast Cancer.

Kim HS, Umbricht CB, Illei PB, Cimino-Mathews A, Cho S, Chowdhury N, Figueroa-Magalhaes MC, Pesce C, Jeter SC, Mylander C, Rosman M, Tafra L, Turner BM, Hicks DG, Jensen TA, Miller DV, Armstrong DK, Connolly RM, Fetting JH, Miller RS, Park BH, Stearns V, Visvanathan K, Wolff AC, Cope L.

J Clin Oncol. 2016 Dec 20;34(36):4390-4397. Epub 2016 Oct 31.


Comparison of 20% sulfur hexafluoride with air for intraocular tamponade in Descemet membrane endothelial keratoplasty (DMEK).

Botsford B, Vedana G, Cope L, Yiu SC, Jun AS.

Arq Bras Oftalmol. 2016 Sep-Oct;79(5):299-302. doi: 10.5935/0004-2749.20160086.


Combination Epigenetic Therapy in Advanced Breast Cancer with 5-Azacitidine and Entinostat: A Phase II National Cancer Institute/Stand Up to Cancer Study.

Connolly RM, Li H, Jankowitz RC, Zhang Z, Rudek MA, Jeter SC, Slater SA, Powers P, Wolff AC, Fetting JH, Brufsky A, Piekarz R, Ahuja N, Laird PW, Shen H, Weisenberger DJ, Cope L, Herman JG, Somlo G, Garcia AA, Jones PA, Baylin SB, Davidson NE, Zahnow CA, Stearns V.

Clin Cancer Res. 2017 Jun 1;23(11):2691-2701. doi: 10.1158/1078-0432.CCR-16-1729. Epub 2016 Dec 15.


Monitoring of Serum DNA Methylation as an Early Independent Marker of Response and Survival in Metastatic Breast Cancer: TBCRC 005 Prospective Biomarker Study.

Visvanathan K, Fackler MS, Zhang Z, Lopez-Bujanda ZA, Jeter SC, Sokoll LJ, Garrett-Mayer E, Cope LM, Umbricht CB, Euhus DM, Forero A, Storniolo AM, Nanda R, Lin NU, Carey LA, Ingle JN, Sukumar S, Wolff AC.

J Clin Oncol. 2017 Mar;35(7):751-758. doi: 10.1200/JCO.2015.66.2080. Epub 2016 Nov 21.


Association of PD-1/PD-L axis expression with cytolytic activity, mutational load, and prognosis in melanoma and other solid tumors.

Danilova L, Wang H, Sunshine J, Kaunitz GJ, Cottrell TR, Xu H, Esandrio J, Anders RA, Cope L, Pardoll DM, Drake CG, Taube JM.

Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):E7769-E7777. Epub 2016 Nov 11.


Atypical Chordae Tendineae of the Canine (Canis familiaris) Right Atrioventricular Valve.

Cope LA.

Anat Histol Embryol. 2016 Dec;45(6):485-489. doi: 10.1111/ahe.12231. Epub 2016 Mar 30.


Morphological Variations in the Canine (Canis familiaris) Right Ventricle Trabecula Septomarginalis Dextra and a Proposed Classification Scheme.

Cope LA.

Anat Histol Embryol. 2016 Dec;45(6):437-442. doi: 10.1111/ahe.12217. Epub 2015 Nov 18.


Tankyrase inhibition promotes a stable human naïve pluripotent state with improved functionality.

Zimmerlin L, Park TS, Huo JS, Verma K, Pather SR, Talbot CC Jr, Agarwal J, Steppan D, Zhang YW, Considine M, Guo H, Zhong X, Gutierrez C, Cope L, Canto-Soler MV, Friedman AD, Baylin SB, Zambidis ET.

Development. 2016 Dec 1;143(23):4368-4380. Epub 2016 Sep 22.


Fecal Metabolome in Hmga1 Transgenic Mice with Polyposis: Evidence for Potential Screen for Early Detection of Precursor Lesions in Colorectal Cancer.

Williams MD, Xian L, Huso T, Park JJ, Huso D, Cope LM, Gang DR, Siems WF, Resar L, Reeves R, Hill HH Jr.

J Proteome Res. 2016 Dec 2;15(12):4176-4187. Epub 2016 Nov 4.


Mutant p53 Together with TGFβ Signaling Influence Organ-Specific Hematogenous Colonization Patterns of Pancreatic Cancer.

Zhong Y, Macgregor-Das A, Saunders T, Whittle MC, Makohon-Moore A, Kohutek ZA, Poling J, Herbst BT, Javier BM, Cope L, Leach SD, Hingorani SR, Iacobuzio-Donahue CA.

Clin Cancer Res. 2017 Mar 15;23(6):1607-1620. doi: 10.1158/1078-0432.CCR-15-1615. Epub 2016 Sep 16.


Distinct neuronal patterns of positive and negative moral processing in psychopathy.

Fede SJ, Borg JS, Nyalakanti PK, Harenski CL, Cope LM, Sinnott-Armstrong W, Koenigs M, Calhoun VD, Kiehl KA.

Cogn Affect Behav Neurosci. 2016 Dec;16(6):1074-1085.


Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma.

Zheng S, Cherniack AD, Dewal N, Moffitt RA, Danilova L, Murray BA, Lerario AM, Else T, Knijnenburg TA, Ciriello G, Kim S, Assie G, Morozova O, Akbani R, Shih J, Hoadley KA, Choueiri TK, Waldmann J, Mete O, Robertson AG, Wu HT, Raphael BJ, Shao L, Meyerson M, Demeure MJ, Beuschlein F, Gill AJ, Sidhu SB, Almeida MQ, Fragoso MCBV, Cope LM, Kebebew E, Habra MA, Whitsett TG, Bussey KJ, Rainey WE, Asa SL, Bertherat J, Fassnacht M, Wheeler DA; Cancer Genome Atlas Research Network, Hammer GD, Giordano TJ, Verhaak RGW.

Cancer Cell. 2016 Aug 8;30(2):363. doi: 10.1016/j.ccell.2016.07.013. Epub 2016 Aug 8. No abstract available.

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