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Items: 47

1.

Overexpression of the base excision repair NTHL1 glycosylase causes genomic instability and early cellular hallmarks of cancer.

Limpose KL, Trego KS, Li Z, Leung SW, Sarker AH, Shah JA, Ramalingam SS, Werner EM, Dynan WS, Cooper PK, Corbett AH, Doetsch PW.

Nucleic Acids Res. 2018 May 18;46(9):4515-4532. doi: 10.1093/nar/gky162.

2.

Tribotronic control of friction in oil-based lubricants with ionic liquid additives.

Cooper PK, Li H, Rutland MW, Webber GB, Atkin R.

Phys Chem Chem Phys. 2016 Aug 24;18(34):23657-62. doi: 10.1039/c6cp04405k.

PMID:
27511143
3.

Non-catalytic Roles for XPG with BRCA1 and BRCA2 in Homologous Recombination and Genome Stability.

Trego KS, Groesser T, Davalos AR, Parplys AC, Zhao W, Nelson MR, Hlaing A, Shih B, Rydberg B, Pluth JM, Tsai MS, Hoeijmakers JHJ, Sung P, Wiese C, Campisi J, Cooper PK.

Mol Cell. 2016 Feb 18;61(4):535-546. doi: 10.1016/j.molcel.2015.12.026. Epub 2016 Jan 28.

4.

Ionic Liquid Adsorption and Nanotribology at the Silica-Oil Interface: Hundred-Fold Dilution in Oil Lubricates as Effectively as the Pure Ionic Liquid.

Li H, Cooper PK, Somers AE, Rutland MW, Howlett PC, Forsyth M, Atkin R.

J Phys Chem Lett. 2014 Dec 4;5(23):4095-9. doi: 10.1021/jz5021422. Epub 2014 Nov 17.

PMID:
26278938
5.

Cell-autonomous progeroid changes in conditional mouse models for repair endonuclease XPG deficiency.

Barnhoorn S, Uittenboogaard LM, Jaarsma D, Vermeij WP, Tresini M, Weymaere M, Menoni H, Brandt RM, de Waard MC, Botter SM, Sarker AH, Jaspers NG, van der Horst GT, Cooper PK, Hoeijmakers JH, van der Pluijm I.

PLoS Genet. 2014 Oct 9;10(10):e1004686. doi: 10.1371/journal.pgen.1004686. eCollection 2014 Oct.

6.

Repair complexes of FEN1 endonuclease, DNA, and Rad9-Hus1-Rad1 are distinguished from their PCNA counterparts by functionally important stability.

Querol-Audí J, Yan C, Xu X, Tsutakawa SE, Tsai MS, Tainer JA, Cooper PK, Nogales E, Ivanov I.

Proc Natl Acad Sci U S A. 2012 May 29;109(22):8528-33. doi: 10.1073/pnas.1121116109. Epub 2012 May 14.

7.

The DNA repair endonuclease XPG interacts directly and functionally with the WRN helicase defective in Werner syndrome.

Trego KS, Chernikova SB, Davalos AR, Perry JJ, Finger LD, Ng C, Tsai MS, Yannone SM, Tainer JA, Campisi J, Cooper PK.

Cell Cycle. 2011 Jun 15;10(12):1998-2007. Epub 2011 Jun 15.

8.

Human flap endonuclease structures, DNA double-base flipping, and a unified understanding of the FEN1 superfamily.

Tsutakawa SE, Classen S, Chapados BR, Arvai AS, Finger LD, Guenther G, Tomlinson CG, Thompson P, Sarker AH, Shen B, Cooper PK, Grasby JA, Tainer JA.

Cell. 2011 Apr 15;145(2):198-211. doi: 10.1016/j.cell.2011.03.004.

9.

A versatile viral system for expression and depletion of proteins in mammalian cells.

Campeau E, Ruhl VE, Rodier F, Smith CL, Rahmberg BL, Fuss JO, Campisi J, Yaswen P, Cooper PK, Kaufman PD.

PLoS One. 2009 Aug 6;4(8):e6529. doi: 10.1371/journal.pone.0006529.

10.

XPD helicase structures and activities: insights into the cancer and aging phenotypes from XPD mutations.

Fan L, Fuss JO, Cheng QJ, Arvai AS, Hammel M, Roberts VA, Cooper PK, Tainer JA.

Cell. 2008 May 30;133(5):789-800. doi: 10.1016/j.cell.2008.04.030.

11.

DNA double-strand break and chromosomal rejoining defects with misrejoining in Nijmegen breakage syndrome cells.

Pluth JM, Yamazaki V, Cooper BA, Rydberg BE, Kirchgessner CU, Cooper PK.

DNA Repair (Amst). 2008 Jan 1;7(1):108-18. Epub 2007 Oct 4.

PMID:
17919995
12.

Structural analysis of flexible proteins in solution by small angle X-ray scattering combined with crystallography.

Tsutakawa SE, Hura GL, Frankel KA, Cooper PK, Tainer JA.

J Struct Biol. 2007 May;158(2):214-23. Epub 2006 Oct 27.

PMID:
17182256
13.

DNA repair: dynamic defenders against cancer and aging.

Fuss JO, Cooper PK.

PLoS Biol. 2006 Jun;4(6):e203. Epub 2006 Jun 13. No abstract available.

14.

WRN exonuclease structure and molecular mechanism imply an editing role in DNA end processing.

Perry JJ, Yannone SM, Holden LG, Hitomi C, Asaithamby A, Han S, Cooper PK, Chen DJ, Tainer JA.

Nat Struct Mol Biol. 2006 May;13(5):414-22. Epub 2006 Apr 23.

PMID:
16622405
15.

Conserved XPB core structure and motifs for DNA unwinding: implications for pathway selection of transcription or excision repair.

Fan L, Arvai AS, Cooper PK, Iwai S, Hanaoka F, Tainer JA.

Mol Cell. 2006 Apr 7;22(1):27-37.

16.

Transcription-coupled repair of 8-oxoguanine: requirement for XPG, TFIIH, and CSB and implications for Cockayne syndrome.

Le Page F, Kwoh EE, Avrutskaya A, Gentil A, Leadon SA, Sarasin A, Cooper PK.

Cell. 2005 Nov 18;123(4):711. No abstract available.

17.

Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: insights for transcription-coupled repair and Cockayne Syndrome.

Sarker AH, Tsutakawa SE, Kostek S, Ng C, Shin DS, Peris M, Campeau E, Tainer JA, Nogales E, Cooper PK.

Mol Cell. 2005 Oct 28;20(2):187-98.

18.

Comparative TFIIS-mediated transcript cleavage by mammalian RNA polymerase II arrested at a lesion in different transcription systems.

Kalogeraki VS, Tornaletti S, Cooper PK, Hanawalt PC.

DNA Repair (Amst). 2005 Sep 28;4(10):1075-87.

PMID:
16046193
19.

Retraction.

Cooper PK, Nouspikel T, Clarkson SG.

Science. 2005 Jun 17;308(5729):1740. No abstract available.

PMID:
15961651
20.
21.

Artemis deficiency confers a DNA double-strand break repair defect and Artemis phosphorylation status is altered by DNA damage and cell cycle progression.

Wang J, Pluth JM, Cooper PK, Cowan MJ, Chen DJ, Yannone SM.

DNA Repair (Amst). 2005 May 2;4(5):556-70.

PMID:
15811628
22.

The single-strand DNA binding activity of human PC4 prevents mutagenesis and killing by oxidative DNA damage.

Wang JY, Sarker AH, Cooper PK, Volkert MR.

Mol Cell Biol. 2004 Jul;24(13):6084-93.

23.

Transcription-coupled repair of oxidative DNA damage in human cells: mechanisms and consequences.

Tsutakawa SE, Cooper PK.

Cold Spring Harb Symp Quant Biol. 2000;65:201-15. Review. No abstract available.

PMID:
12760034
24.

Transcription-coupled repair of 8-oxoguanine in human cells.

Le Page F, Cabral-Neto J, Cooper PK, Sarasin A.

Methods Enzymol. 2002;353:536-47. No abstract available.

PMID:
12078525
25.

Spatial distribution and yield of DNA double-strand breaks induced by 3-7 MeV helium ions in human fibroblasts.

Rydberg B, Heilbronn L, Holley WR, Löbrich M, Zeitlin C, Chatterjee A, Cooper PK.

Radiat Res. 2002 Jul;158(1):32-42.

PMID:
12071801
26.

Factors influencing the removal of thymine glycol from DNA in gamma-irradiated human cells.

Weinfeld M, Xing JZ, Lee J, Leadon SA, Cooper PK, Le XC.

Prog Nucleic Acid Res Mol Biol. 2001;68:139-49. Review.

PMID:
11554293
27.

Repair of clustered DNA damage caused by high LET radiation in human fibroblasts.

Rydberg B, Lobrich M, Cooper PK.

Phys Med. 1998 Jul;14 Suppl 1:24-8.

PMID:
11542637
30.
31.

Patient-focused care: what is it?

Johnston CL, Cooper PK.

Holist Nurs Pract. 1997 Apr;11(3):1-7. Review.

PMID:
9165781
32.
34.

Non-random distribution of DNA double-strand breaks induced by particle irradiation.

Löbrich M, Cooper PK, Rydberg B.

Int J Radiat Biol. 1996 Nov;70(5):493-503.

PMID:
8947529
35.

Random-breakage mapping method applied to human DNA sequences.

Löbrich M, Rydberg B, Cooper PK.

Nucleic Acids Res. 1996 May 15;24(10):1802-8.

36.
38.
39.

Defective repair of ionizing radiation damage in Cockayne's syndrome and xeroderma pigmentosum group G.

Cooper PK, Leadon SA.

Ann N Y Acad Sci. 1994 Jul 29;726:330-2. Review. No abstract available.

PMID:
8092696
42.

Repair responses to DNA damage: enzymatic pathways in E coli and human cells.

Hanawalt PC, Cooper PK, Ganesan AK, Lloyd RS, Smith CA, Zolan ME.

J Cell Biochem. 1982;18(3):271-83. No abstract available.

PMID:
7040432
43.

Repair replication schemes in bacteria and human cells.

Hanawalt PC, Cooper PK, Smith CA.

Prog Nucleic Acid Res Mol Biol. 1981;26:181-96. No abstract available.

PMID:
7025093
44.

DNA repair in bacteria and mammalian cells.

Hanawalt PC, Cooper PK, Ganesan AK, Smith CA.

Annu Rev Biochem. 1979;48:783-836. Review. No abstract available.

PMID:
382997
45.

Heterogeneity of patch size in repair replicated DNA in Escherichia coli.

Cooper PK, Hanawalt PC.

J Mol Biol. 1972 Jun 14;67(1):1-10. No abstract available.

PMID:
4557600
46.

Role of DNA polymerase I and the rec system in excision-repair in Escherichia coli.

Cooper PK, Hanawalt PC.

Proc Natl Acad Sci U S A. 1972 May;69(5):1156-60.

47.

Absence of repair replication following ultraviolet irradiation of an excision-deficient mutant of Escherichia coli.

Cooper PK, Hanawalt PC.

Photochem Photobiol. 1971 Jan;13(1):83-5. No abstract available.

PMID:
4926149

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