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Ancient BCMA-like Genes Herald B Cell Regulation in Lampreys.

Das S, Sutoh Y, Cancro MP, Rast JP, Han Q, Bommakanti G, Cooper MD, Hirano M.

J Immunol. 2019 Dec 1;203(11):2909-2916. doi: 10.4049/jimmunol.1900026. Epub 2019 Oct 30.


Large-effect flowering time mutations reveal conditionally adaptive paths through fitness landscapes in Arabidopsis thaliana.

Taylor MA, Wilczek AM, Roe JL, Welch SM, Runcie DE, Cooper MD, Schmitt J.

Proc Natl Acad Sci U S A. 2019 Sep 3;116(36):17890-17899. doi: 10.1073/pnas.1902731116. Epub 2019 Aug 16.


A tyrosine sulfation-dependent HLA-I modification identifies memory B cells and plasma cells.

Chan JTH, Liu Y, Khan S, St-Germain JR, Zou C, Leung LYT, Yang J, Shi M, Grunebaum E, Campisi P, Propst EJ, Holler T, Bar-Or A, Wither JE, Cairo CW, Moran MF, Palazzo AF, Cooper MD, Ehrhardt GRA.

Sci Adv. 2018 Nov 7;4(11):eaar7653. doi: 10.1126/sciadv.aar7653. eCollection 2018 Nov.


Pillars Article: Somatic Diversification of Variable Lymphocyte Receptors in the Agnathan Sea Lamprey. Nature. 2004. 430: 174-180.

Pancer Z, Amemiya CT, Ehrhardt GRA, Ceitlin J, Gartland GL, Cooper MD.

J Immunol. 2018 Sep 1;201(5):1336-1342. No abstract available.


VLR Recognition of TLR5 Expands the Molecular Characterization of Protein Antigen Binding by Non-Ig-based Antibodies.

Gunn RJ, Herrin BR, Acharya S, Cooper MD, Wilson IA.

J Mol Biol. 2018 Apr 27;430(9):1350-1367. doi: 10.1016/j.jmb.2018.03.016. Epub 2018 Mar 26.


Attitudes Toward and Management of Fibromyalgia: A National Survey of Canadian Rheumatologists and Critical Appraisal of Guidelines.

Agarwal A, Oparin Y, Glick L, Fitzcharles MA, Adachi JD, Cooper MD, Gallo L, Wong L, Busse JW.

J Clin Rheumatol. 2018 Aug;24(5):243-249. doi: 10.1097/RHU.0000000000000679.


Crystal structure of an anti-idiotype variable lymphocyte receptor.

Collins BC, Nakahara H, Acharya S, Cooper MD, Herrin BR, Wilson IA.

Acta Crystallogr F Struct Biol Commun. 2017 Dec 1;73(Pt 12):682-687. doi: 10.1107/S2053230X1701620X. Epub 2017 Nov 14.


Evolution of Alternative Adaptive Immune Systems in Vertebrates.

Boehm T, Hirano M, Holland SJ, Das S, Schorpp M, Cooper MD.

Annu Rev Immunol. 2018 Apr 26;36:19-42. doi: 10.1146/annurev-immunol-042617-053028. Epub 2017 Nov 16. Review.


hace1 Influences zebrafish cardiac development via ROS-dependent mechanisms.

Razaghi B, Steele SL, Prykhozhij SV, Stoyek MR, Hill JA, Cooper MD, McDonald L, Lin W, Daugaard M, Crapoulet N, Chacko S, Lewis SM, Scott IC, Sorensen PHB, Berman JN.

Dev Dyn. 2018 Feb;247(2):289-303. doi: 10.1002/dvdy.24600. Epub 2017 Oct 27.


Structural Insights into VLR Fine Specificity for Blood Group Carbohydrates.

Collins BC, Gunn RJ, McKitrick TR, Cummings RD, Cooper MD, Herrin BR, Wilson IA.

Structure. 2017 Nov 7;25(11):1667-1678.e4. doi: 10.1016/j.str.2017.09.003. Epub 2017 Oct 5.


Interacting effects of genetic variation for seed dormancy and flowering time on phenology, life history, and fitness of experimental Arabidopsis thaliana populations over multiple generations in the field.

Taylor MA, Cooper MD, Sellamuthu R, Braun P, Migneault A, Browning A, Perry E, Schmitt J.

New Phytol. 2017 Oct;216(1):291-302. doi: 10.1111/nph.14712. Epub 2017 Jul 28.


Leucine-rich-repeat-containing variable lymphocyte receptors as modules to target plant-expressed proteins.

Velásquez AC, Nomura K, Cooper MD, Herrin BR, He SY.

Plant Methods. 2017 Apr 19;13:29. doi: 10.1186/s13007-017-0180-8. eCollection 2017.


Characterization of Lamprey BAFF-like Gene: Evolutionary Implications.

Das S, Sutoh Y, Hirano M, Han Q, Li J, Cooper MD, Herrin BR.

J Immunol. 2016 Oct 1;197(7):2695-703. doi: 10.4049/jimmunol.1600799. Epub 2016 Aug 19.


The evolution of innate lymphoid cells.

Vivier E, van de Pavert SA, Cooper MD, Belz GT.

Nat Immunol. 2016 Jun 21;17(7):790-4. doi: 10.1038/ni.3459.


Identification of human plasma cells with a lamprey monoclonal antibody.

Yu C, Liu Y, Chan JTH, Tong J, Li Z, Shi M, Davani D, Parsons M, Khan S, Zhan W, Kyu S, Grunebaum E, Campisi P, Propst EJ, Jaye DL, Trudel S, Moran MF, Ostrowski M, Herrin BR, Lee FE, Sanz I, Cooper MD, Ehrhardt GR.

JCI Insight. 2016;1(3). pii: 84738. doi: 10.1172/jci.insight.84738. Epub 2016 Mar 17.


Predicting the evolutionary dynamics of seasonal adaptation to novel climates in Arabidopsis thaliana.

Fournier-Level A, Perry EO, Wang JA, Braun PT, Migneault A, Cooper MD, Metcalf CJ, Schmitt J.

Proc Natl Acad Sci U S A. 2016 May 17;113(20):E2812-21. doi: 10.1073/pnas.1517456113. Epub 2016 May 2.


Strategies to mitigate dissociative and psychotomimetic effects of ketamine in the treatment of major depressive episodes: a narrative review.

Cooper MD, Rosenblat JD, Cha DS, Lee Y, Kakar R, McIntyre RS.

World J Biol Psychiatry. 2017 Sep;18(6):410-423. doi: 10.3109/15622975.2016.1139747. Epub 2016 Mar 16. Review.


Fluctuating, warm temperatures decrease the effect of a key floral repressor on flowering time in Arabidopsis thaliana.

Burghardt LT, Runcie DE, Wilczek AM, Cooper MD, Roe JL, Welch SM, Schmitt J.

New Phytol. 2016 Apr;210(2):564-76. doi: 10.1111/nph.13799. Epub 2015 Dec 17.


Correction to Small Molecule Hydration Free Energies in Explicit Solvent: An Extensive Test of Fixed-Charge Atomistic Simulations.

Mobley DL, Bayly CI, Cooper MD, Shirts MR, Dill KA.

J Chem Theory Comput. 2015 Mar 10;11(3):1347. doi: 10.1021/acs.jctc.5b00154. No abstract available.


Characterization of Lamprey IL-17 Family Members and Their Receptors.

Han Q, Das S, Hirano M, Holland SJ, McCurley N, Guo P, Rosenberg CS, Boehm T, Cooper MD.

J Immunol. 2015 Dec 1;195(11):5440-51. doi: 10.4049/jimmunol.1500892. Epub 2015 Oct 21.


d-Methionine reduces tobramycin-induced ototoxicity without antimicrobial interference in animal models.

Fox DJ, Cooper MD, Speil CA, Roberts MH, Yanik SC, Meech RP, Hargrove TL, Verhulst SJ, Rybak LP, Campbell KC.

J Cyst Fibros. 2016 Jul;15(4):518-30. doi: 10.1016/j.jcf.2015.06.005. Epub 2015 Jul 10.


Evolution of two prototypic T cell lineages.

Das S, Li J, Hirano M, Sutoh Y, Herrin BR, Cooper MD.

Cell Immunol. 2015 Jul;296(1):87-94. doi: 10.1016/j.cellimm.2015.04.007. Epub 2015 May 1.


The early history of B cells.

Cooper MD.

Nat Rev Immunol. 2015 Mar;15(3):191-7. doi: 10.1038/nri3801. Epub 2015 Feb 6. Review.


Selection of the lamprey VLRC antigen receptor repertoire.

Holland SJ, Gao M, Hirano M, Iyer LM, Luo M, Schorpp M, Cooper MD, Aravind L, Mariuzza RA, Boehm T.

Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):14834-9. doi: 10.1073/pnas.1415655111. Epub 2014 Sep 16.


Genomic donor cassette sharing during VLRA and VLRC assembly in jawless vertebrates.

Das S, Li J, Holland SJ, Iyer LM, Hirano M, Schorpp M, Aravind L, Cooper MD, Boehm T.

Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):14828-33. doi: 10.1073/pnas.1415580111. Epub 2014 Sep 16.


Lagging adaptation to warming climate in Arabidopsis thaliana.

Wilczek AM, Cooper MD, Korves TM, Schmitt J.

Proc Natl Acad Sci U S A. 2014 Jun 3;111(22):7906-13. doi: 10.1073/pnas.1406314111. Epub 2014 May 19.


Chronic lymphocytic leukemia monitoring with a Lamprey idiotope-specific antibody.

Nakahara H, Herrin BR, Alder MN, Catera R, Yan XJ, Chiorazzi N, Cooper MD.

Cancer Immunol Res. 2013 Oct;1(4):223-8. doi: 10.1158/2326-6066.CIR-13-0052.


Single-incision laparoscopic cholecystectomy at community hospitals in Honolulu, Hawai'i: a case series.

Hirai CA, Murariu D, Cooper MD, Oishi AJ, Nishida SD, Lorenzo CS, Bueno RS.

Hawaii J Med Public Health. 2013 Dec;72(12):428-32.


Definition of a third VLR gene in hagfish.

Li J, Das S, Herrin BR, Hirano M, Cooper MD.

Proc Natl Acad Sci U S A. 2013 Sep 10;110(37):15013-8. doi: 10.1073/pnas.1314540110. Epub 2013 Aug 26.


Evolutionary implications of a third lymphocyte lineage in lampreys.

Hirano M, Guo P, McCurley N, Schorpp M, Das S, Boehm T, Cooper MD.

Nature. 2013 Sep 19;501(7467):435-8. doi: 10.1038/nature12467. Epub 2013 Aug 11.


M-OSCE as a method to measure dental hygiene students' critical thinking: a pilot study.

McComas MJ, Wright RA, Mann NK, Cooper MD, Jacks ME.

J Dent Educ. 2013 Apr;77(4):485-93.


Paths to selection on life history loci in different natural environments across the native range of Arabidopsis thaliana.

Fournier-Level A, Wilczek AM, Cooper MD, Roe JL, Anderson J, Eaton D, Moyers BT, Petipas RH, Schaeffer RN, Pieper B, Reymond M, Koornneef M, Welch SM, Remington DL, Schmitt J.

Mol Ecol. 2013 Jul;22(13):3552-66. doi: 10.1111/mec.12285. Epub 2013 Mar 18.


Methane indicator values for peatlands: a comparison of species and functional groups.

Gray A, Levy PE, Cooper MD, Jones T, Gaiawyn J, Leeson SR, Ward SE, Dinsmore KJ, Drewer J, Sheppard LJ, Ostle NJ, Evans CD, Burden A, Zieliński P.

Glob Chang Biol. 2013 Apr;19(4):1141-50. doi: 10.1111/gcb.12120. Epub 2013 Jan 20.


Organization of lamprey variable lymphocyte receptor C locus and repertoire development.

Das S, Hirano M, Aghaallaei N, Bajoghli B, Boehm T, Cooper MD.

Proc Natl Acad Sci U S A. 2013 Apr 9;110(15):6043-8. doi: 10.1073/pnas.1302500110. Epub 2013 Mar 4.


Overexpression, crystallization and preliminary X-ray crystallographic analysis of the variable lymphocyte receptor 2913 ectodomain fused with internalin B.

Lee JY, Kim HS, Baek IW, Back JM, Han MR, Kong SY, Kim JH, Kirchdoerfer RN, Kim JO, Cooper MD, Wilson IA, Kim HJ, Han BW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jan 1;69(Pt 1):39-41. doi: 10.1107/S1744309112045484. Epub 2012 Dec 20.


Immune related genes underpin the evolution of adaptive immunity in jawless vertebrates.

McCurley N, Hirano M, Das S, Cooper MD.

Curr Genomics. 2012 Apr;13(2):86-94.


Purification and identification of cell surface antigens using lamprey monoclonal antibodies.

Yu C, Ali S, St-Germain J, Liu Y, Yu X, Jaye DL, Moran MF, Cooper MD, Ehrhardt GR.

J Immunol Methods. 2012 Dec 14;386(1-2):43-9. doi: 10.1016/j.jim.2012.08.016. Epub 2012 Sep 4.


Secretory leukocyte protease inhibitor binds to Neisseria gonorrhoeae outer membrane opacity protein and is bactericidal.

Cooper MD, Roberts MH, Barauskas OL, Jarvis GA.

Am J Reprod Immunol. 2012 Aug;68(2):116-27. doi: 10.1111/j.1600-0897.2012.01149.x. Epub 2012 Apr 26.


Deficient expression of a B cell cytoplasmic tyrosine kinase in human X-linked agammaglobulinemia. 1993.

Tsukada S, Saffran DC, Rawlings DJ, Parolini O, Allen RC, Klisak I, Sparkes RS, Kubagawa H, Mohandas T, Quan S, Belmont JW, Cooper MD, Conley ME, Witte ON.

J Immunol. 2012 Apr 1;188(7):2936-47. No abstract available.


Variable lymphocyte receptor recognition of the immunodominant glycoprotein of Bacillus anthracis spores.

Kirchdoerfer RN, Herrin BR, Han BW, Turnbough CL Jr, Cooper MD, Wilson IA.

Structure. 2012 Mar 7;20(3):479-86. doi: 10.1016/j.str.2012.01.009.


VLR-based adaptive immunity.

Boehm T, McCurley N, Sutoh Y, Schorpp M, Kasahara M, Cooper MD.

Annu Rev Immunol. 2012;30:203-20. doi: 10.1146/annurev-immunol-020711-075038. Epub 2012 Jan 3. Review.


A map of local adaptation in Arabidopsis thaliana.

Fournier-Level A, Korte A, Cooper MD, Nordborg M, Schmitt J, Wilczek AM.

Science. 2011 Oct 7;334(6052):86-9. doi: 10.1126/science.1209271.


The evolution of adaptive immunity in vertebrates.

Hirano M, Das S, Guo P, Cooper MD.

Adv Immunol. 2011;109:125-57. doi: 10.1016/B978-0-12-387664-5.00004-2. Review.


A thymus candidate in lampreys.

Bajoghli B, Guo P, Aghaallaei N, Hirano M, Strohmeier C, McCurley N, Bockman DE, Schorpp M, Cooper MD, Boehm T.

Nature. 2011 Feb 3;470(7332):90-4. doi: 10.1038/nature09655.


FcR-like 2 Inhibition of B cell receptor-mediated activation of B cells.

Jackson TA, Haga CL, Ehrhardt GR, Davis RS, Cooper MD.

J Immunol. 2010 Dec 15;185(12):7405-12. doi: 10.4049/jimmunol.1002305. Epub 2010 Nov 10.


Coupled mathematical model of tumorigenesis and angiogenesis in vascular tumours.

Cooper MD, Tanaka ML, Puri IK.

Cell Prolif. 2010 Dec;43(6):542-52. doi: 10.1111/j.1365-2184.2010.00703.x.


Genetic and physiological bases for phenological responses to current and predicted climates.

Wilczek AM, Burghardt LT, Cobb AR, Cooper MD, Welch SM, Schmitt J.

Philos Trans R Soc Lond B Biol Sci. 2010 Oct 12;365(1555):3129-47. doi: 10.1098/rstb.2010.0128. Review.


Immunoregulatory roles for fc receptor-like molecules.

Ehrhardt GR, Cooper MD.

Curr Top Microbiol Immunol. 2011;350:89-104. doi: 10.1007/82_2010_88. Review.


Alternative adaptive immunity in jawless vertebrates.

Herrin BR, Cooper MD.

J Immunol. 2010 Aug 1;185(3):1367-74. doi: 10.4049/jimmunol.0903128. Review.

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