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Items: 1 to 50 of 51

1.

An in vitro study for the dosimetric and radiobiological validation of respiratory gating in conventional and hypofractionated radiotherapy of the lung: effect of dose, dose rate, and breathing pattern.

Cerviño LI, Soultan D, Advani SJ, Cornell M, Yock A, Pettersson N, Song WY, Aguilera J, Murphy J, Hoh C, James C, Paravati A, Coope R, Gill B, Moiseenko V.

Phys Med Biol. 2019 Jul 4;64(13):135009. doi: 10.1088/1361-6560/ab2940.

PMID:
31189137
2.

Rise of the Machines: Advances in Deep Learning for Cancer Diagnosis.

Levine AB, Schlosser C, Grewal J, Coope R, Jones SJM, Yip S.

Trends Cancer. 2019 Mar;5(3):157-169. doi: 10.1016/j.trecan.2019.02.002. Epub 2019 Feb 28. Review.

PMID:
30898263
3.

A high-throughput protocol for isolating cell-free circulating tumor DNA from peripheral blood.

Pandoh PK, Corbett RD, McDonald H, Alcaide M, Kirk H, Trinh E, Haile S, MacLeod T, Smailus D, Bilobram S, Mungall AJ, Ma Y, Moore RA, Coope R, Zhao Y, Jones SJ, Holt RA, Karsan A, Morin RD, Marra MA.

Biotechniques. 2019 Feb;66(2):85-92. doi: 10.2144/btn-2018-0148.

4.

Imaging-Based 3-Dimensional Printing for Improved Maxillofacial Presurgical Planning: A Single Center Case Series.

Guest W, Forbes D, Schlosser C, Yip S, Coope R, Chew J.

Can Assoc Radiol J. 2019 Feb;70(1):74-82. doi: 10.1016/j.carj.2018.10.002.

PMID:
30691567
5.

Sources of erroneous sequences and artifact chimeric reads in next generation sequencing of genomic DNA from formalin-fixed paraffin-embedded samples.

Haile S, Corbett RD, Bilobram S, Bye MH, Kirk H, Pandoh P, Trinh E, MacLeod T, McDonald H, Bala M, Miller D, Novik K, Coope RJ, Moore RA, Zhao Y, Mungall AJ, Ma Y, Holt RA, Jones SJ, Marra MA.

Nucleic Acids Res. 2019 Jan 25;47(2):e12. doi: 10.1093/nar/gky1142.

6.

MAVIS: merging, annotation, validation, and illustration of structural variants.

Reisle C, Mungall KL, Choo C, Paulino D, Bleile DW, Muhammadzadeh A, Mungall AJ, Moore RA, Shlafman I, Coope R, Pleasance S, Ma Y, Jones SJM.

Bioinformatics. 2019 Feb 1;35(3):515-517. doi: 10.1093/bioinformatics/bty621.

PMID:
30016509
7.

The Genome of the Beluga Whale (Delphinapterus leucas).

Jones SJM, Taylor GA, Chan S, Warren RL, Hammond SA, Bilobram S, Mordecai G, Suttle CA, Miller KM, Schulze A, Chan AM, Jones SJ, Tse K, Li I, Cheung D, Mungall KL, Choo C, Ally A, Dhalla N, Tam AKY, Troussard A, Kirk H, Pandoh P, Paulino D, Coope RJN, Mungall AJ, Moore R, Zhao Y, Birol I, Ma Y, Marra M, Haulena M.

Genes (Basel). 2017 Dec 11;8(12). pii: E378. doi: 10.3390/genes8120378.

8.

The Genome of the Northern Sea Otter (Enhydra lutris kenyoni).

Jones SJ, Haulena M, Taylor GA, Chan S, Bilobram S, Warren RL, Hammond SA, Mungall KL, Choo C, Kirk H, Pandoh P, Ally A, Dhalla N, Tam AKY, Troussard A, Paulino D, Coope RJN, Mungall AJ, Moore R, Zhao Y, Birol I, Ma Y, Marra M, Jones SJM.

Genes (Basel). 2017 Dec 11;8(12). pii: E379. doi: 10.3390/genes8120379.

9.

The North American bullfrog draft genome provides insight into hormonal regulation of long noncoding RNA.

Hammond SA, Warren RL, Vandervalk BP, Kucuk E, Khan H, Gibb EA, Pandoh P, Kirk H, Zhao Y, Jones M, Mungall AJ, Coope R, Pleasance S, Moore RA, Holt RA, Round JM, Ohora S, Walle BV, Veldhoen N, Helbing CC, Birol I.

Nat Commun. 2017 Nov 10;8(1):1433. doi: 10.1038/s41467-017-01316-7.

10.

Complete Genome Sequence of Mycobacterium chimaera SJ42, a Nonoutbreak Strain from an Immunocompromised Patient with Pulmonary Disease.

Hasan NA, Warren RL, Epperson LE, Malecha A, Alexander DC, Turenne CY, MacMillan D, Birol I, Pleasance S, Coope R, Jones SJM, Romney MG, Ng M, Chan T, Rodrigues M, Tang P, Gardy JL, Strong M.

Genome Announc. 2017 Sep 14;5(37). pii: e00963-17. doi: 10.1128/genomeA.00963-17.

11.

A novel 3D-printed phantom insert for 4D PET/CT imaging and simultaneous integrated boost radiotherapy.

Cerviño L, Soultan D, Cornell M, Yock A, Pettersson N, Song WY, Aguilera J, Advani S, Murphy J, Hoh C, James C, Paravati A, Coope R, Gill B, Moiseenko V.

Med Phys. 2017 Oct;44(10):5467-5474. doi: 10.1002/mp.12495. Epub 2017 Aug 31.

PMID:
28766726
12.

Increasing quality, throughput and speed of sample preparation for strand-specific messenger RNA sequencing.

Haile S, Corbett RD, MacLeod T, Bilobram S, Smailus D, Tsao P, Kirk H, McDonald H, Pandoh P, Bala M, Hirst M, Miller D, Moore RA, Mungall AJ, Schein J, Coope RJ, Ma Y, Zhao Y, Holt RA, Jones SJ, Marra MA.

BMC Genomics. 2017 Jul 5;18(1):515. doi: 10.1186/s12864-017-3900-6.

13.

Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis.

Haile S, Pandoh P, McDonald H, Corbett RD, Tsao P, Kirk H, MacLeod T, Jones M, Bilobram S, Brooks D, Smailus D, Steidl C, Scott DW, Bala M, Hirst M, Miller D, Moore RA, Mungall AJ, Coope RJ, Ma Y, Zhao Y, Holt RA, Jones SJ, Marra MA.

PLoS One. 2017 Jun 1;12(6):e0178706. doi: 10.1371/journal.pone.0178706. eCollection 2017.

14.

Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics' GemCode Sequencing Data.

Coombe L, Warren RL, Jackman SD, Yang C, Vandervalk BP, Moore RA, Pleasance S, Coope RJ, Bohlmann J, Holt RA, Jones SJ, Birol I.

PLoS One. 2016 Sep 15;11(9):e0163059. doi: 10.1371/journal.pone.0163059. eCollection 2016.

15.

A feasibility study of pelvic morphology for curved implants.

Zakariaee R, Schlosser CL, Baker DR, Meek RN, Coope RJN.

Injury. 2016 Oct;47(10):2195-2202. doi: 10.1016/j.injury.2016.07.029. Epub 2016 Jul 29.

PMID:
27496724
16.

Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation.

Jackman SD, Warren RL, Gibb EA, Vandervalk BP, Mohamadi H, Chu J, Raymond A, Pleasance S, Coope R, Wildung MR, Ritland CE, Bousquet J, Jones SJ, Bohlmann J, Birol I.

Genome Biol Evol. 2015 Dec 8;8(1):29-41. doi: 10.1093/gbe/evv244.

17.

Large-scale profiling of microRNAs for The Cancer Genome Atlas.

Chu A, Robertson G, Brooks D, Mungall AJ, Birol I, Coope R, Ma Y, Jones S, Marra MA.

Nucleic Acids Res. 2016 Jan 8;44(1):e3. doi: 10.1093/nar/gkv808. Epub 2015 Aug 13.

18.

A clinically validated diagnostic second-generation sequencing assay for detection of hereditary BRCA1 and BRCA2 mutations.

Bosdet IE, Docking TR, Butterfield YS, Mungall AJ, Zeng T, Coope RJ, Yorida E, Chow K, Bala M, Young SS, Hirst M, Birol I, Moore RA, Jones SJ, Marra MA, Holt R, Karsan A.

J Mol Diagn. 2013 Nov;15(6):796-809. doi: 10.1016/j.jmoldx.2013.07.004. Epub 2013 Oct 4. Erratum in: J Mol Diagn. 2014 May;16(3):378.

PMID:
24094589
19.

Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data.

Birol I, Raymond A, Jackman SD, Pleasance S, Coope R, Taylor GA, Yuen MM, Keeling CI, Brand D, Vandervalk BP, Kirk H, Pandoh P, Moore RA, Zhao Y, Mungall AJ, Jaquish B, Yanchuk A, Ritland C, Boyle B, Bousquet J, Ritland K, Mackay J, Bohlmann J, Jones SJ.

Bioinformatics. 2013 Jun 15;29(12):1492-7. doi: 10.1093/bioinformatics/btt178. Epub 2013 May 22.

20.

High performance gel imaging with a commercial single lens reflex camera.

Slobodan J, Corbett R, Wye N, Schein JE, Marra MA, Coope RJ.

Rev Sci Instrum. 2011 Mar;82(3):034301. doi: 10.1063/1.3553027.

PMID:
21456768
21.

Efficient assembly of very short oligonucleotides using T4 DNA Ligase.

Horspool DR, Coope RJ, Holt RA.

BMC Res Notes. 2010 Nov 9;3:291. doi: 10.1186/1756-0500-3-291.

22.

Contaminant-induced current decline in capillary array electrophoresis.

Coope RJ, Marziali A.

Electrophoresis. 2005 Jun;26(11):2128-37.

PMID:
15852354
23.

Fibroblast growth factor 7, secreted by breast fibroblasts, is an interleukin-1beta-induced paracrine growth factor for human breast cells.

Palmieri C, Roberts-Clark D, Assadi-Sabet A, Coope RC, O'Hare M, Sunters A, Hanby A, Slade MJ, Gomm JJ, Lam EW, Coombes RC.

J Endocrinol. 2003 Apr;177(1):65-81.

PMID:
12697038
24.

Resuspension of DNA sequencing reaction products in agarose increases sequence quality on an automated sequencer.

Vatcher G, Smailus D, Krzywinski M, Guin R, Stott J, Tsai M, Chan S, Pandoh P, Yang G, Asano J, Olson T, Prabhu AL, Coope R, Marziali A, Schein J, Jones S, Marra M.

Biotechniques. 2002 Sep;33(3):532-4, 536, 538-9.

25.

Modulation of retroreflection by controlled frustration of total internal reflection.

Coope RJ, Whitehead LA, Kotlicki A.

Appl Opt. 2002 Sep 1;41(25):5357-61.

PMID:
12211564
26.

Fibroblast growth factor 8 is expressed at higher levels in lactating human breast and in breast cancer.

Zammit C, Coope R, Gomm JJ, Shousha S, Johnston CL, Coombes RC.

Br J Cancer. 2002 Apr 8;86(7):1097-103.

27.

Altered intracellular localization of fibroblast growth factor receptor 3 in human breast cancer.

Zammit C, Barnard R, Gomm J, Coope R, Shousha S, Coombes C, Johnston C.

J Pathol. 2001 May;194(1):27-34.

PMID:
11329138
28.

The human mammary gland basement membrane is integral to the polarity of luminal epithelial cells.

Slade MJ, Coope RC, Gomm JJ, Coombes RC.

Exp Cell Res. 1999 Feb 25;247(1):267-78.

PMID:
10047469
29.

Increased expression of fibroblast growth factor 8 in human breast cancer.

Marsh SK, Bansal GS, Zammit C, Barnard R, Coope R, Roberts-Clarke D, Gomm JJ, Coombes RC, Johnston CL.

Oncogene. 1999 Jan 28;18(4):1053-60.

30.

A paracrine role for myoepithelial cell-derived FGF2 in the normal human breast.

Gomm JJ, Browne PJ, Coope RC, Bansal GS, Yiangou C, Johnston CL, Mason R, Coombes RC.

Exp Cell Res. 1997 Jul 10;234(1):165-73.

PMID:
9223382
32.

Effect of basic fibroblast growth factor-saporin mitotoxin on breast cancer cell lines in vitro.

Luqmani Y, Chander S, Coope R, Gomm J, Lappi D, Coombes R.

Oncol Rep. 1997 Mar-Apr;4(2):425-8.

PMID:
21590072
33.

Down-regulation of a novel form of fibroblast growth factor receptor 1 in human breast cancer.

Yiangou C, Cox H, Bansal GS, Coope R, Gomm JJ, Barnard R, Walters J, Groome N, Shousha S, Coombes RC, Johnston CL.

Br J Cancer. 1997;76(11):1419-27.

34.

The location of acidic fibroblast growth factor in the breast is dependent on the activity of proteases present in breast cancer tissue.

Coope RC, Browne PJ, Yiangou C, Bansal GS, Walters J, Groome N, Shousha S, Johnston CL, Coombes RC, Gomm JJ.

Br J Cancer. 1997;75(11):1621-30.

35.

Presence of exon 5-deleted oestrogen receptor in human breast cancer: functional analysis and clinical significance.

Desai AJ, Luqmani YA, Walters JE, Coope RC, Dagg B, Gomm JJ, Pace PE, Rees CN, Thirunavukkarasu V, Shousha S, Groome NP, Coombes R, Ali S.

Br J Cancer. 1997;75(8):1173-84.

36.

Fibroblast growth factor 2 in breast cancer: occurrence and prognostic significance.

Yiangou C, Gomm JJ, Coope RC, Law M, Luqmani YA, Shousha S, Coombes RC, Johnston CL.

Br J Cancer. 1997;75(1):28-33.

37.

Expression of fibroblast growth factor 1 is lower in breast cancer than in the normal human breast.

Bansal GS, Yiangou C, Coope RC, Gomm JJ, Luqmani YA, Coombes RC, Johnston CL.

Br J Cancer. 1995 Dec;72(6):1420-6.

38.

Isolation of pure populations of epithelial and myoepithelial cells from the normal human mammary gland using immunomagnetic separation with Dynabeads.

Gomm JJ, Browne PJ, Coope RC, Liu QY, Buluwela L, Coombes RC.

Anal Biochem. 1995 Mar 20;226(1):91-9.

PMID:
7785785
39.

Effectiveness of combined limonene and 4-hydroxyandrostenedione in the treatment of NMU-induced rat mammary tumours.

Chander SK, Lansdown AG, Luqmani YA, Gomm JJ, Coope RC, Gould N, Coombes RC.

Br J Cancer. 1994 May;69(5):879-82.

40.

Sedatives in pneumonia and bronchitis.

COOPE R.

Practitioner. 1960 Jan;184:62-4. No abstract available.

PMID:
13811767
41.

Rales, rhonchi, and Laennec.

ROBERTSON AJ, COOPE R.

Lancet. 1957 Aug 31;273(6992):417-23. No abstract available.

PMID:
13464086
42.

Treatment of acute pneumonia.

COOPE R, SUTTON WS.

Br Med J. 1956 Feb 4;1(4961):285-7. No abstract available.

43.

Mr. Bampton's prize: or The tale of an old stethoscope.

COOPE R.

Lancet. 1952 Sep 20;2(6734):577-80. No abstract available.

PMID:
12981918
44.

Advances in the treatment of respiratory diseases.

COOPE R.

Practitioner. 1950 Oct;165(988):372-7. No abstract available.

PMID:
14786137
45.

Pneumonitis.

COOPE R.

Thorax. 1946 Mar;1:26-9. No abstract available.

46.

Dr. William Brogdon Paterson.

Coope R.

Br Med J. 1934 Jun 2;1(3830):1013. No abstract available.

47.

THE UREA CONCENTRATION TEST IN NEPHRITIS AND ITS PROGNOSTIC VALUE.

Coope R, Jones HW.

Br Med J. 1927 Jan 8;1(3444):51-2. No abstract available.

48.

Insulin and the pituitrin "fat liver".

Coope R.

J Physiol. 1925 May 21;60(1-2):92-4. No abstract available.

49.

The effect of pituitrin on the fatty acid of the liver.

Coope R, Chamberlain EN.

J Physiol. 1925 May 21;60(1-2):69-78. No abstract available.

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