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Items: 19

1.

Derived esterase activity in Drosophila sechellia contributes to evolved octanoic acid resistance.

Lanno SM, Coolon JD.

Insect Mol Biol. 2019 Apr 12. doi: 10.1111/imb.12587. [Epub ahead of print]

PMID:
30977928
2.

Investigating the role of Osiris genes in Drosophila sechellia larval resistance to a host plant toxin.

Lanno SM, Shimshak SJ, Peyser RD, Linde SC, Coolon JD.

Ecol Evol. 2019 Jan 15;9(4):1922-1933. doi: 10.1002/ece3.4885. eCollection 2019 Feb.

3.

Corrigendum: Tempo and mode of regulatory evolution in Drosophila.

Coolon JD, McManus CJ, Stevenson KR, Graveley BR, Wittkopp PJ.

Genome Res. 2018 Nov;28(11):1766. doi: 10.1101/gr.244087.118. No abstract available.

4.

Transcriptomic Analysis of Octanoic Acid Response in Drosophila sechellia Using RNA-Sequencing.

Lanno SM, Gregory SM, Shimshak SJ, Alverson MK, Chiu K, Feil AL, Findley MG, Forman TE, Gordon JT, Ho J, Krupp JL, Lam I, Lane J, Linde SC, Morse AE, Rusk S, Ryan R, Saniee A, Sheth RB, Siranosian JJ, Sirichantaropart L, Sternlieb SR, Zaccardi CM, Coolon JD.

G3 (Bethesda). 2017 Dec 4;7(12):3867-3873. doi: 10.1534/g3.117.300297.

5.

Analysis of cytochrome P450 contribution to evolved plant toxin resistance in Drosophila sechellia.

Peyser RD, Lanno SM, Shimshak SJ, Coolon JD.

Insect Mol Biol. 2017 Dec;26(6):715-720. doi: 10.1111/imb.12329. Epub 2017 Jul 13.

PMID:
28703934
6.

Evolutionary Dynamics of Regulatory Changes Underlying Gene Expression Divergence among Saccharomyces Species.

Metzger BPH, Wittkopp PJ, Coolon JD.

Genome Biol Evol. 2017 Apr 1;9(4):843-854. doi: 10.1093/gbe/evx035.

7.

Genetic basis of octanoic acid resistance in Drosophila sechellia: functional analysis of a fine-mapped region.

Andrade López JM, Lanno SM, Auerbach JM, Moskowitz EC, Sligar LA, Wittkopp PJ, Coolon JD.

Mol Ecol. 2017 Feb;26(4):1148-1160. doi: 10.1111/mec.14001. Epub 2017 Feb 4.

8.

Molecular Mechanisms and Evolutionary Processes Contributing to Accelerated Divergence of Gene Expression on the Drosophila X Chromosome.

Coolon JD, Stevenson KR, McManus CJ, Yang B, Graveley BR, Wittkopp PJ.

Mol Biol Evol. 2015 Oct;32(10):2605-15. doi: 10.1093/molbev/msv135. Epub 2015 Jun 2.

9.

Tempo and mode of regulatory evolution in Drosophila.

Coolon JD, McManus CJ, Stevenson KR, Graveley BR, Wittkopp PJ.

Genome Res. 2014 May;24(5):797-808. doi: 10.1101/gr.163014.113. Epub 2014 Feb 24. Erratum in: Genome Res. 2018 Nov;28(11):1766.

10.

Evolution of splicing regulatory networks in Drosophila.

McManus CJ, Coolon JD, Eipper-Mains J, Wittkopp PJ, Graveley BR.

Genome Res. 2014 May;24(5):786-96. doi: 10.1101/gr.161521.113. Epub 2014 Feb 10.

11.

Sex-specific effects of cis-regulatory variants in Drosophila melanogaster.

Coolon JD, Webb W, Wittkopp PJ.

Genetics. 2013 Dec;195(4):1419-22. doi: 10.1534/genetics.113.156331. Epub 2013 Oct 4.

12.

The roles of cis- and trans-regulation in the evolution of regulatory incompatibilities and sexually dimorphic gene expression.

Meiklejohn CD, Coolon JD, Hartl DL, Wittkopp PJ.

Genome Res. 2014 Jan;24(1):84-95. doi: 10.1101/gr.156414.113. Epub 2013 Sep 16.

13.

Sources of bias in measures of allele-specific expression derived from RNA-sequence data aligned to a single reference genome.

Stevenson KR, Coolon JD, Wittkopp PJ.

BMC Genomics. 2013 Aug 7;14:536. doi: 10.1186/1471-2164-14-536.

14.

Long-term nitrogen amendment alters the diversity and assemblage of soil bacterial communities in tallgrass prairie.

Coolon JD, Jones KL, Todd TC, Blair JM, Herman MA.

PLoS One. 2013 Jun 28;8(6):e67884. doi: 10.1371/journal.pone.0067884. Print 2013.

15.

Genomic imprinting absent in Drosophila melanogaster adult females.

Coolon JD, Stevenson KR, McManus CJ, Graveley BR, Wittkopp PJ.

Cell Rep. 2012 Jul 26;2(1):69-75. doi: 10.1016/j.celrep.2012.06.013. Epub 2012 Jul 20.

16.

Microbial ecological response of the intestinal flora of Peromyscus maniculatus and P. leucopus to heavy metal contamination.

Coolon JD, Jones KL, Narayanan S, Wisely SM.

Mol Ecol. 2010 Mar;19 Suppl 1:67-80. doi: 10.1111/j.1365-294X.2009.04485.x.

17.

Regulatory divergence in Drosophila revealed by mRNA-seq.

McManus CJ, Coolon JD, Duff MO, Eipper-Mains J, Graveley BR, Wittkopp PJ.

Genome Res. 2010 Jun;20(6):816-25. doi: 10.1101/gr.102491.109. Epub 2010 Mar 30. Erratum in: Genome Res. 2014 Jun;24(6):1051.

18.

Caenorhabditis elegans genomic response to soil bacteria predicts environment-specific genetic effects on life history traits.

Coolon JD, Jones KL, Todd TC, Carr BC, Herman MA.

PLoS Genet. 2009 Jun;5(6):e1000503. doi: 10.1371/journal.pgen.1000503. Epub 2009 Jun 5.

19.

Molecular approach for assessing responses of microbial-feeding nematodes to burning and chronic nitrogen enrichment in a native grassland.

Jones KL, Todd TC, Wall-Beam JL, Coolon JD, Blair JM, Herman MA.

Mol Ecol. 2006 Aug;15(9):2601-9.

PMID:
16842430

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