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As the world turns, evolving lymphoma classifications - past, present and future.

Swerdlow SH, Cook JR.

Hum Pathol. 2019 Sep 4. pii: S0046-8177(19)30159-5. doi: 10.1016/j.humpath.2019.08.019. [Epub ahead of print]


Myeloid neoplasm with eosinophilia and ETV6-JAK2 fusion.

Cook JR, Rogers HJ, Chandra PK, Prescott JL, Mukherjee S.

Leuk Lymphoma. 2019 Sep 4:1-4. doi: 10.1080/10428194.2019.1658105. [Epub ahead of print] No abstract available.


Class-switched Primary Cutaneous Marginal Zone Lymphomas Are Frequently IgG4-positive and Have Features Distinct From IgM-positive Cases.

Carlsen ED, Swerdlow SH, Cook JR, Gibson SE.

Am J Surg Pathol. 2019 Oct;43(10):1403-1412. doi: 10.1097/PAS.0000000000001363.


Molecular and Cytogenetic Education in Hematopathology Fellowship.

Soma LA, Kovach AE, Siddon AJ, Beck R, Gibson SE, Swerdlow SH, Kim AS, Wu D, Jones D, Cook JR, Prakash S, Rosado F, Crane G, Bradley K, Weinberg OK, Sargent RL.

Am J Clin Pathol. 2019 Sep 9;152(4):438-445. doi: 10.1093/ajcp/aqz048.


Cervical length and quantitative fetal fibronectin in the prediction of spontaneous preterm birth in asymptomatic women with congenital uterine anomaly.

Ridout AE, Ibeto LA, Ross GN, Cook JR, Sykes L, David AL, Seed PT, Tribe RM, Bennett PR, Terzidou V, Shennan AH, Chandiramani M; collaborators, Brown RG, Chatfield S, Sadeh D.

Am J Obstet Gynecol. 2019 Oct;221(4):341.e1-341.e9. doi: 10.1016/j.ajog.2019.05.032. Epub 2019 May 24.


Comparison of real-time PCR vs PCR with fragment length analysis for the detection of CALR mutations in suspected myeloproliferative neoplasms.

Doyle LJ, Betz BL, Weigelin HC, Procop GW, Cook JR.

Int J Lab Hematol. 2019 May 3. doi: 10.1111/ijlh.13040. [Epub ahead of print] No abstract available.


Very rare lineage switch from acute myeloid leukemia to mixed phenotype acute leukemia, B/Myeloid, during chemotherapy with no clonal evolution.

Nomani L, Cook JR, Rogers HJ.

Int J Lab Hematol. 2019 Aug;41(4):e86-e88. doi: 10.1111/ijlh.12977. Epub 2019 Feb 1. No abstract available.


Autologous transplantation as consolidation for high risk aggressive T-cell non-Hodgkin lymphoma: a SWOG 9704 intergroup trial subgroup analysis.

Al-Mansour Z, Li H, Cook JR, Constine LS, Couban S, Stewart DA, Shea TC, Porcu P, Winter JN, Kahl BS, Smith SM, Marcellus DC, Barton KP, Mills GM, LeBlanc M, Rimsza LM, Forman SJ, Leonard JP, Fisher RI, Friedberg JW, Stiff PJ.

Leuk Lymphoma. 2019 Aug;60(8):1934-1941. doi: 10.1080/10428194.2018.1563691. Epub 2019 Jan 10.


IRTA1 and MNDA Expression in Marginal Zone Lymphoma: Utility in Differential Diagnosis and Implications for Classification.

Wang Z, Cook JR.

Am J Clin Pathol. 2019 Feb 4;151(3):337-343. doi: 10.1093/ajcp/aqy144.


Molecular classification of primary mediastinal large B-cell lymphoma using routinely available tissue specimens.

Mottok A, Wright G, Rosenwald A, Ott G, Ramsower C, Campo E, Braziel RM, Delabie J, Weisenburger DD, Song JY, Chan WC, Cook JR, Fu K, Greiner T, Smeland E, Holte H, Savage KJ, Glinsmann-Gibson BJ, Gascoyne RD, Staudt LM, Jaffe ES, Connors JM, Scott DW, Steidl C, Rimsza LM.

Blood. 2018 Nov 29;132(22):2401-2405. doi: 10.1182/blood-2018-05-851154. Epub 2018 Sep 26.


Natural Environments Near Schools: Potential Benefits for Socio-Emotional and Behavioral Development in Early Childhood.

Scott JT, Kilmer RP, Wang C, Cook JR, Haber MG.

Am J Community Psychol. 2018 Dec;62(3-4):419-432. doi: 10.1002/ajcp.12272. Epub 2018 Sep 17.


Development of a Behavioral Health Stigma Measure and Application of Machine Learning for Classification.

Tokmic F, Hadzikadic M, Cook JR, Tcheremissine OV.

Innov Clin Neurosci. 2018 Jun 1;15(5-6):34-42. Review.


Brain-targeted stem cell gene therapy corrects mucopolysaccharidosis type II via multiple mechanisms.

Gleitz HF, Liao AY, Cook JR, Rowlston SF, Forte GM, D'Souza Z, O'Leary C, Holley RJ, Bigger BW.

EMBO Mol Med. 2018 Jul;10(7). pii: e8730. doi: 10.15252/emmm.201708730.


Cell Type-Specific Contributions of the Angiotensin II Type 1a Receptor to Aorta Homeostasis and Aneurysmal Disease-Brief Report.

Galatioto J, Caescu CI, Hansen J, Cook JR, Miramontes I, Iyengar R, Ramirez F.

Arterioscler Thromb Vasc Biol. 2018 Mar;38(3):588-591. doi: 10.1161/ATVBAHA.117.310609. Epub 2018 Jan 25.


Tandem Autologous Hematopoietic Cell Transplantation for Patients with Primary Progressive or Recurrent Hodgkin Lymphoma: A SWOG and Blood and Marrow Transplant Clinical Trials Network Phase II Trial (SWOG S0410/BMT CTN 0703).

Smith EP, Li H, Friedberg JW, Constine LS, Rimsza LM, Cook JR, Laport GG, Popplewell LL, Holmberg LA, Smith SM, LeBlanc M, Forman SJ, Fisher RI, Stiff PJ.

Biol Blood Marrow Transplant. 2018 Apr;24(4):700-707. doi: 10.1016/j.bbmt.2017.12.798. Epub 2017 Dec 28.


Selective Inhibition of FOXO1 Activator/Repressor Balance Modulates Hepatic Glucose Handling.

Langlet F, Haeusler RA, Lindén D, Ericson E, Norris T, Johansson A, Cook JR, Aizawa K, Wang L, Buettner C, Accili D.

Cell. 2017 Nov 2;171(4):824-835.e18. doi: 10.1016/j.cell.2017.09.045. Epub 2017 Oct 19.


Ultrasensitive automated RNA in situ hybridization for kappa and lambda light chain mRNA detects B-cell clonality in tissue biopsies with performance comparable or superior to flow cytometry.

Guo L, Wang Z, Anderson CM, Doolittle E, Kernag S, Cotta CV, Ondrejka SL, Ma XJ, Cook JR.

Mod Pathol. 2018 Mar;31(3):385-394. doi: 10.1038/modpathol.2017.142. Epub 2017 Oct 20.


Design, Validation, and Clinical Implementation of a Gap-Polymerase Chain Reaction Method for α-Thalassemia Genotyping Using Capillary Electrophoresis.

Basha B, Mularo F, Cook JR.

Hemoglobin. 2017 Mar;41(2):124-130. doi: 10.1080/03630269.2017.1327868. Epub 2017 Jun 9.


Cerclage position, cervical length and preterm delivery in women undergoing ultrasound indicated cervical cerclage: A retrospective cohort study.

Cook JR, Chatfield S, Chandiramani M, Kindinger L, Cacciatore S, Sykes L, Teoh T, Shennan A, Terzidou V, Bennett PR.

PLoS One. 2017 Jun 1;12(6):e0178072. doi: 10.1371/journal.pone.0178072. eCollection 2017.


What Is the Clinical Utility of Repeat SNP Array Testing in the Follow-up of Myeloid Neoplasms?: A Retrospective Analysis of 44 Patients With Serial SNP Arrays.

Basha B, Smith J, Rogers HJ, Cook JR.

Am J Clin Pathol. 2017 Mar 1;147(3):278-284. doi: 10.1093/ajcp/aqx003.


PDCD1LG2 (PD-L2) RNA in situ hybridization is a sensitive, specific, and practical marker of primary mediastinal large B-cell lymphoma.

Wang Z, Cook JR.

Br J Haematol. 2018 May;181(4):564-566. doi: 10.1111/bjh.14670. Epub 2017 Apr 3. No abstract available.


New Molecular Assay for the Proliferation Signature in Mantle Cell Lymphoma Applicable to Formalin-Fixed Paraffin-Embedded Biopsies.

Scott DW, Abrisqueta P, Wright GW, Slack GW, Mottok A, Villa D, Jares P, Rauert-Wunderlich H, Royo C, Clot G, Pinyol M, Boyle M, Chan FC, Braziel RM, Chan WC, Weisenburger DD, Cook JR, Greiner TC, Fu K, Ott G, Delabie J, Smeland EB, Holte H, Jaffe ES, Steidl C, Connors JM, Gascoyne RD, Rosenwald A, Staudt LM, Campo E, Rimsza LM; Lymphoma/Leukemia Molecular Profiling Project.

J Clin Oncol. 2017 May 20;35(15):1668-1677. doi: 10.1200/JCO.2016.70.7901. Epub 2017 Mar 14.


The curious case of an internal pilot in a multicentre randomised trial-time for a rethink?

Cook JA, Beard DJ, Cook JR, MacLennan GS.

Pilot Feasibility Stud. 2016 Dec 13;2:73. eCollection 2016.


Langerhans Cell Histiocytosis Shows Distinct Cytoplasmic Expression of Major Histocompatibility Class II Antigens.

Redd L, Schmelz M, Burack WR, Cook JR, Day AW, Rimsza L.

J Hematop. 2016 Sep;9(3):107-112. doi: 10.1007/s12308-016-0272-9. Epub 2016 Mar 10.


Relationship between vaginal microbial dysbiosis, inflammation, and pregnancy outcomes in cervical cerclage.

Kindinger LM, MacIntyre DA, Lee YS, Marchesi JR, Smith A, McDonald JA, Terzidou V, Cook JR, Lees C, Israfil-Bayli F, Faiza Y, Toozs-Hobson P, Slack M, Cacciatore S, Holmes E, Nicholson JK, Teoh TG, Bennett PR.

Sci Transl Med. 2016 Aug 3;8(350):350ra102. doi: 10.1126/scitranslmed.aag1026.


pSTAT3/pSTAT5 Signaling Patterns in Molecularly Defined Subsets of Myeloproliferative Neoplasms.

Sakr H, Clark Schneider K, Murugesan G, Bodo J, Hsi ED, Cook JR.

Appl Immunohistochem Mol Morphol. 2018 Feb;26(2):147-152. doi: 10.1097/PAI.0000000000000391.


Outcomes of MYC-associated lymphomas after R-CHOP with and without consolidative autologous stem cell transplant: subset analysis of randomized trial intergroup SWOG S9704.

Puvvada SD, Stiff PJ, Leblanc M, Cook JR, Couban S, Leonard JP, Kahl B, Marcellus D, Shea TC, Winter JN, Li H, Rimsza LM, Friedberg JW, Smith SM.

Br J Haematol. 2016 Sep;174(5):686-91. doi: 10.1111/bjh.14100. Epub 2016 Apr 13.


US Intergroup Trial of Response-Adapted Therapy for Stage III to IV Hodgkin Lymphoma Using Early Interim Fluorodeoxyglucose-Positron Emission Tomography Imaging: Southwest Oncology Group S0816.

Press OW, Li H, Schöder H, Straus DJ, Moskowitz CH, LeBlanc M, Rimsza LM, Bartlett NL, Evens AM, Mittra ES, LaCasce AS, Sweetenham JW, Barr PM, Fanale MA, Knopp MV, Noy A, Hsi ED, Cook JR, Lechowicz MJ, Gascoyne RD, Leonard JP, Kahl BS, Cheson BD, Fisher RI, Friedberg JW.

J Clin Oncol. 2016 Jun 10;34(17):2020-7. doi: 10.1200/JCO.2015.63.1119. Epub 2016 Apr 11.


Validation of a molecular diagnostic assay for CALR exon 9 indels in myeloproliferative neoplasms: identification of coexisting JAK2 and CALR mutations and a novel 9 bp deletion in CALR.

Murugesan G, Guenther-Johnson J, Mularo F, Cook JR, Daly TM.

Int J Lab Hematol. 2016 Jun;38(3):284-97. doi: 10.1111/ijlh.12484. Epub 2016 Mar 28.


Complications arising from cardiac implantable electrophysiological devices: review of epidemiology, pathogenesis and prevention for the clinician.

Atreya AR, Cook JR, Lindenauer PK.

Postgrad Med. 2016;128(2):223-30. doi: 10.1080/00325481.2016.1151327. Epub 2016 Feb 22. Review.


Pause-dependent paroxysmal phase-4 atrioventricular block.

Atreya AR, Cook JR, Fox MT.

BMJ Case Rep. 2015 Oct 16;2015. pii: bcr2015211801. doi: 10.1136/bcr-2015-211801. No abstract available.


Diffuse large B-cell lymphoma cell-of-origin classification using the Lymph2Cx assay in the context of BCL2 and MYC expression status.

Kendrick S, Tus K, Wright G, Jaffe ES, Rosenwald A, Campo E, Chan WC, Connors JM, Braziel RM, Ott G, Delabie J, Cook JR, Weisenburger DD, Greiner TC, Fu K, Staudt LM, Gascoyne RD, Scott DW, Rimsza LM.

Leuk Lymphoma. 2016;57(3):717-20. doi: 10.3109/10428194.2015.1072767. Epub 2015 Oct 5. No abstract available.


Assessment Practices of Child Clinicians.

Cook JR, Hausman EM, Jensen-Doss A, Hawley KM.

Assessment. 2017 Mar;24(2):210-221. doi: 10.1177/1073191115604353. Epub 2016 Jul 28.


Gpr17 in AgRP Neurons Regulates Feeding and Sensitivity to Insulin and Leptin.

Ren H, Cook JR, Kon N, Accili D.

Diabetes. 2015 Nov;64(11):3670-9. doi: 10.2337/db15-0390. Epub 2015 Jul 15.


Identification of Primary Mediastinal Large B-cell Lymphoma at Nonmediastinal Sites by Gene Expression Profiling.

Yuan J, Wright G, Rosenwald A, Steidl C, Gascoyne RD, Connors JM, Mottok A, Weisenburger DD, Greiner TC, Fu K, Smith L, Rimsza LM, Jaffe ES, Campo E, Martinez A, Delabie J, Braziel RM, Cook JR, Ott G, Vose JM, Staudt LM, Chan WC; Lymphoma Leukemia Molecular Profiling Project (LLMPP).

Am J Surg Pathol. 2015 Oct;39(10):1322-30. doi: 10.1097/PAS.0000000000000473.


A Conceptual Model of Irritability Following Traumatic Brain Injury: A Qualitative, Participatory Research Study.

Hammond FM, Davis C, Cook JR, Philbrick P, Hirsch MA.

J Head Trauma Rehabil. 2016 Mar-Apr;31(2):E1-11. doi: 10.1097/HTR.0000000000000136.


Effects of oral premedication on cognitive status of elderly patients undergoing cardiac catheterization.

Ashraf JM, Schweiger M, Vallurupalli N, Bellantonio S, Cook JR.

J Geriatr Cardiol. 2015 May;12(3):257-62. doi: 10.11909/j.issn.1671-5411.2015.03.017.


Immunohistochemistry for BRAF V600E in the Differential Diagnosis of Hairy Cell Leukemia vs Other Splenic B-Cell Lymphomas.

Turakhia S, Lanigan C, Hamadeh F, Swerdlow SH, Tubbs RR, Cook JR.

Am J Clin Pathol. 2015 Jul;144(1):87-93. doi: 10.1309/AJCP5WVXJ2KTLODO.


Plasma ProBNP Is Not a Specific Marker for Transient Myocardial Ischemia.

Maqsood K, Shakoor MT, Cook JR, Giugliano GR, Lotfi A.

J Clin Med Res. 2015 Jul;7(7):506-10. doi: 10.14740/jocmr2024w. Epub 2015 May 8.


Adipocyte SIRT1 knockout promotes PPARγ activity, adipogenesis and insulin sensitivity in chronic-HFD and obesity.

Mayoral R, Osborn O, McNelis J, Johnson AM, Oh DY, Izquierdo CL, Chung H, Li P, Traves PG, Bandyopadhyay G, Pessentheiner AR, Ofrecio JM, Cook JR, Qiang L, Accili D, Olefsky JM.

Mol Metab. 2015 Mar 5;4(5):378-91. doi: 10.1016/j.molmet.2015.02.007. eCollection 2015 May.


Searching for CALRity in myeloproliferative neoplasms.

Cook JR.

Am J Clin Pathol. 2015 May;143(5):617-9. doi: 10.1309/AJCPZFWDM4GDTCI8. No abstract available.


Pathogenesis of selective insulin resistance in isolated hepatocytes.

Cook JR, Langlet F, Kido Y, Accili D.

J Biol Chem. 2015 May 29;290(22):13972-80. doi: 10.1074/jbc.M115.638197. Epub 2015 Apr 14.


Merging regulatory and reimbursement needs in clinical trials.

Cook JR.

Value Health. 2015 Mar;18(2):145-6. doi: 10.1016/j.jval.2015.02.007. No abstract available.


Exogenous oxytocin modulates human myometrial microRNAs.

Cook JR, MacIntyre DA, Samara E, Kim SH, Singh N, Johnson MR, Bennett PR, Terzidou V.

Am J Obstet Gynecol. 2015 Jul;213(1):65.e1-65.e9. doi: 10.1016/j.ajog.2015.03.015. Epub 2015 Mar 7.


Epilepsy in dogs five years of age and older: 99 cases (2006-2011).

Ghormley TM, Feldman DG, Cook JR Jr.

J Am Vet Med Assoc. 2015 Feb 15;246(4):447-50. doi: 10.2460/javma.246.4.447.


Dimorphic effects of transforming growth factor-β signaling during aortic aneurysm progression in mice suggest a combinatorial therapy for Marfan syndrome.

Cook JR, Clayton NP, Carta L, Galatioto J, Chiu E, Smaldone S, Nelson CA, Cheng SH, Wentworth BM, Ramirez F.

Arterioscler Thromb Vasc Biol. 2015 Apr;35(4):911-7. doi: 10.1161/ATVBAHA.114.305150. Epub 2015 Jan 22.


A mutant allele encoding DNA binding-deficient FoxO1 differentially regulates hepatic glucose and lipid metabolism.

Cook JR, Matsumoto M, Banks AS, Kitamura T, Tsuchiya K, Accili D.

Diabetes. 2015 Jun;64(6):1951-65. doi: 10.2337/db14-1506. Epub 2015 Jan 9.


Does knowledge of the cost of cardiovascular tests influence physician ordering patterns?

Schweiger MJ, Giugliano GR, Cook JR, Mayforth J, Rothberg MB.

Hosp Pract (1995). 2014 Oct;42(4):46-52. doi: 10.3810/hp.2014.10.1141.


Global microRNA expression profiling uncovers molecular markers for classification and prognosis in aggressive B-cell lymphoma.

Iqbal J, Shen Y, Huang X, Liu Y, Wake L, Liu C, Deffenbacher K, Lachel CM, Wang C, Rohr J, Guo S, Smith LM, Wright G, Bhagavathi S, Dybkaer K, Fu K, Greiner TC, Vose JM, Jaffe E, Rimsza L, Rosenwald A, Ott G, Delabie J, Campo E, Braziel RM, Cook JR, Tubbs RR, Armitage JO, Weisenburger DD, Staudt LM, Gascoyne RD, McKeithan TW, Chan WC.

Blood. 2015 Feb 12;125(7):1137-45. doi: 10.1182/blood-2014-04-566778. Epub 2014 Dec 10.

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