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Items: 1 to 50 of 253

1.

Altered Expression of an FT Cluster Underlies a Major Locus Controlling Domestication-Related Changes to Chickpea Phenology and Growth Habit.

Ortega R, Hecht VFG, Freeman JS, Rubio J, Carrasquilla-Garcia N, Mir RR, Penmetsa RV, Cook DR, Millan T, Weller JL.

Front Plant Sci. 2019 Jul 3;10:824. doi: 10.3389/fpls.2019.00824. eCollection 2019.

2.

Global-level population genomics reveals differential effects of geography and phylogeny on horizontal gene transfer in soil bacteria.

Greenlon A, Chang PL, Damtew ZM, Muleta A, Carrasquilla-Garcia N, Kim D, Nguyen HP, Suryawanshi V, Krieg CP, Yadav SK, Patel JS, Mukherjee A, Udupa S, Benjelloun I, Thami-Alami I, Yasin M, Patil B, Singh S, Sarma BK, von Wettberg EJB, Kahraman A, Bukun B, Assefa F, Tesfaye K, Fikre A, Cook DR.

Proc Natl Acad Sci U S A. 2019 Jul 23;116(30):15200-15209. doi: 10.1073/pnas.1900056116. Epub 2019 Jul 8.

PMID:
31285337
3.

Multi-trait analysis of domestication genes in Cicer arietinum - Cicer reticulatum hybrids with a multidimensional approach: Modeling wide crosses for crop improvement.

Shin MG, Bulyntsev SV, Chang PL, Korbu LB, Carrasquila-Garcia N, Vishnyakova MA, Samsonova MG, Cook DR, Nuzhdin SV.

Plant Sci. 2019 Aug;285:122-131. doi: 10.1016/j.plantsci.2019.04.018. Epub 2019 Apr 25.

4.

Impact of Simulated Corn Earworm (Lepidoptera: Noctuidae) Kernel Feeding on Field Corn Yield.

Olivi BM, Gore J, Musser FM, Catchot AL, Cook DR.

J Econ Entomol. 2019 May 17. pii: toz119. doi: 10.1093/jee/toz119. [Epub ahead of print]

PMID:
31100110
5.

Community-Based Activity and Sedentary Patterns Are Associated With Cognitive Performance in Mobility-Limited Older Adults.

Wanigatunga AA, Manini TM, Cook DR, Katula J, Fielding RA, Kramer AF, Verghese J, Rapp SR, Sink KM, King AC, Buford TW, Anton S, Nadkarni N, Jennings JM, Reid K, Espeland MA, Gill TM, Pahor M, Nocera JR.

Front Aging Neurosci. 2018 Nov 15;10:341. doi: 10.3389/fnagi.2018.00341. eCollection 2018.

6.

Quantifying the Impact of Excluding Insecticide Classes From Cotton Integrated Pest Management Programs in the U.S. Mid-South.

North JH, Gore J, Catchot AL, Cook DR, Dodds DM, Musser FR.

J Econ Entomol. 2019 Feb 12;112(1):341-348. doi: 10.1093/jee/toy339.

PMID:
30462317
7.

Influence of Temperature on the Efficacy of Foliar Insecticide Sprays Against Sugarcane Aphid (Hemiptera: Aphididae) Populations in Grain Sorghum.

Etheridge B, Gore J, Catchot AL, Cook DR, Musser FR, Larson EJ.

J Econ Entomol. 2019 Feb 12;112(1):196-200. doi: 10.1093/jee/toy315.

PMID:
30376107
8.

Checkpoint Blockade Reverses Anergy in IL-13Rα2 Humanized scFv-Based CAR T Cells to Treat Murine and Canine Gliomas.

Yin Y, Boesteanu AC, Binder ZA, Xu C, Reid RA, Rodriguez JL, Cook DR, Thokala R, Blouch K, McGettigan-Croce B, Zhang L, Konradt C, Cogdill AP, Panjwani MK, Jiang S, Migliorini D, Dahmane N, Posey AD Jr, June CH, Mason NJ, Lin Z, O'Rourke DM, Johnson LA.

Mol Ther Oncolytics. 2018 Aug 28;11:20-38. doi: 10.1016/j.omto.2018.08.002. eCollection 2018 Dec 21.

9.

Preproglucagon Neurons in the Nucleus of the Solitary Tract Are the Main Source of Brain GLP-1, Mediate Stress-Induced Hypophagia, and Limit Unusually Large Intakes of Food.

Holt MK, Richards JE, Cook DR, Brierley DI, Williams DL, Reimann F, Gribble FM, Trapp S.

Diabetes. 2019 Jan;68(1):21-33. doi: 10.2337/db18-0729. Epub 2018 Oct 2.

10.

Neonicotinoid Insecticide Resistance in Tobacco Thrips (Thysanoptera: Thripidae) of Mississippi.

Darnell-Crumpton C, Catchot AL, Cook DR, Gore J, Dodds DM, Morsello SC, Musser FR.

J Econ Entomol. 2018 Dec 14;111(6):2824-2830. doi: 10.1093/jee/toy298.

PMID:
30277513
11.

Impact of a Multidomain Intensive Lifestyle Intervention on Complaints About Memory, Problem-Solving, and Decision-Making Abilities: The Action for Health in Diabetes Randomized Controlled Clinical Trial.

Espeland MA, Dutton GR, Neiberg RH, Carmichael O, Hayden KM, Johnson KC, Jeffery RW, Baker LD, Cook DR, Kitzman DW, Rapp SR; Action for Health in Diabetes (Look AHEAD) Research Group.

J Gerontol A Biol Sci Med Sci. 2018 Oct 8;73(11):1560-1567. doi: 10.1093/gerona/gly124.

PMID:
29846553
12.

Associations between riffle development and aquatic biota following lowhead dam removal.

Cook DR, Sullivan SMP.

Environ Monit Assess. 2018 May 10;190(6):339. doi: 10.1007/s10661-018-6716-1.

13.

Genetic Diversity, Population Structure, and Genetic Correlation with Climatic Variation in Chickpea (Cicer arietinum) Landraces from Pakistan.

Sani SGAS, Chang PL, Zubair A, Carrasquilla-Garcia N, Cordeiro M, Penmetsa RV, Munis MFH, Nuzhdin SV, Cook DR, von Wettberg EJ.

Plant Genome. 2018 Mar;11(1). doi: 10.3835/plantgenome2017.08.0067.

14.

Ecology and genomics of an important crop wild relative as a prelude to agricultural innovation.

von Wettberg EJB, Chang PL, Başdemir F, Carrasquila-Garcia N, Korbu LB, Moenga SM, Bedada G, Greenlon A, Moriuchi KS, Singh V, Cordeiro MA, Noujdina NV, Dinegde KN, Shah Sani SGA, Getahun T, Vance L, Bergmann E, Lindsay D, Mamo BE, Warschefsky EJ, Dacosta-Calheiros E, Marques E, Yilmaz MA, Cakmak A, Rose J, Migneault A, Krieg CP, Saylak S, Temel H, Friesen ML, Siler E, Akhmetov Z, Ozcelik H, Kholova J, Can C, Gaur P, Yildirim M, Sharma H, Vadez V, Tesfaye K, Woldemedhin AF, Tar'an B, Aydogan A, Bukun B, Penmetsa RV, Berger J, Kahraman A, Nuzhdin SV, Cook DR.

Nat Commun. 2018 Feb 13;9(1):649. doi: 10.1038/s41467-018-02867-z.

15.

A comparison of outcomes between Canada and the United States in patients recovering from hip fracture repair: secondary analysis of the FOCUS trial.

Beaupre LA, Wai EK, Hoover DR, Noveck H, Roffey DM, Cook DR, Magaziner JS, Carson JL.

Int J Qual Health Care. 2018 Mar 1;30(2):97-103. doi: 10.1093/intqhc/mzx199.

16.

Value of Neonicotinoid Insecticide Seed Treatments in Mid-South Cotton (Gossypium hirsutum [Malvales: Malvaceae]) Production Systems.

North JH, Gore J, Catchot AL, Stewart SD, Lorenz GM, Musser FR, Cook DR, Kerns DL, Dodds DM.

J Econ Entomol. 2018 Feb 9;111(1):10-15. doi: 10.1093/jee/tox324.

PMID:
29281077
17.

Value of Neonicotinoid Insecticide Seed Treatments in Mid-South Corn (Zea mays) Production Systems.

North JH, Gore J, Catchot AL, Stewart SD, Lorenz GM, Musser FR, Cook DR, Kerns DL, Leonard BR, Dodds DM.

J Econ Entomol. 2018 Feb 9;111(1):187-192. doi: 10.1093/jee/tox278.

PMID:
29177425
18.

A Role for Mitochondrial Translation in Promotion of Viability in K-Ras Mutant Cells.

Martin TD, Cook DR, Choi MY, Li MZ, Haigis KM, Elledge SJ.

Cell Rep. 2017 Jul 11;20(2):427-438. doi: 10.1016/j.celrep.2017.06.061.

19.

Genomic and phenotypic analysis of Vavilov's historic landraces reveals the impact of environment and genomic islands of agronomic traits.

Plekhanova E, Vishnyakova MA, Bulyntsev S, Chang PL, Carrasquilla-Garcia N, Negash K, Wettberg EV, Noujdina N, Cook DR, Samsonova MG, Nuzhdin SV.

Sci Rep. 2017 Jul 6;7(1):4816. doi: 10.1038/s41598-017-05087-5.

20.

Choosing Wisely Canada recommendations.

Cook DS.

Can Fam Physician. 2016 Nov;62(11):902. No abstract available.

21.

Races of the Celery Pathogen Fusarium oxysporum f. sp. apii Are Polyphyletic.

Epstein L, Kaur S, Chang PL, Carrasquilla-Garcia N, Lyu G, Cook DR, Subbarao KV, O'Donnell K.

Phytopathology. 2017 Apr;107(4):463-473. doi: 10.1094/PHYTO-04-16-0174-R. Epub 2017 Feb 27.

22.

Impact of Lepidoptera (Crambidae, Noctuidae, and Pyralidae) Pests on Corn Containing Pyramided Bt Traits and a Blended Refuge in the Southern United States.

Reay-Jones FP, Bessin RT, Brewer MJ, Buntin DG, Catchot AL, Cook DR, Flanders KL, Kerns DL, Porter RP, Reisig DD, Stewart SD, Rice ME.

J Econ Entomol. 2016 Aug;109(4):1859-71. doi: 10.1093/jee/tow109. Epub 2016 Jun 21. Erratum in: J Econ Entomol. 2017 Feb 1;110(1):302.

PMID:
27329627
23.

Multiple post-domestication origins of kabuli chickpea through allelic variation in a diversification-associated transcription factor.

Varma Penmetsa R, Carrasquilla-Garcia N, Bergmann EM, Vance L, Castro B, Kassa MT, Sarma BK, Datta S, Farmer AD, Baek JM, Coyne CJ, Varshney RK, von Wettberg EJ, Cook DR.

New Phytol. 2016 Sep;211(4):1440-51. doi: 10.1111/nph.14010. Epub 2016 May 19.

24.

A pigeonpea gene confers resistance to Asian soybean rust in soybean.

Kawashima CG, Guimarães GA, Nogueira SR, MacLean D, Cook DR, Steuernagel B, Baek J, Bouyioukos C, Melo Bdo V, Tristão G, de Oliveira JC, Rauscher G, Mittal S, Panichelli L, Bacot K, Johnson E, Iyer G, Tabor G, Wulff BB, Ward E, Rairdan GJ, Broglie KE, Wu G, van Esse HP, Jones JD, Brommonschenkel SH.

Nat Biotechnol. 2016 Jun;34(6):661-5. doi: 10.1038/nbt.3554. Epub 2016 Apr 25.

PMID:
27111723
25.

Value of Neonicotinoid Insecticide Seed Treatments in Mid-South Soybean (Glycine max) Production Systems.

North JH, Gore J, Catchot AL, Stewart SD, Lorenz GM, Musser FR, Cook DR, Kerns DL, Dodds DM.

J Econ Entomol. 2016 Apr 18. pii: tow035. [Epub ahead of print]

PMID:
27091814
26.

Evaluation of Corn Earworm, Helicoverpa zea (Lepidoptera: Noctuidae), Economic Injury Levels in Mid-South Reproductive Stage Soybean.

Adams BP, Cook DR, Catchot AL, Gore J, Musser F, Stewart SD, Kerns DL, Lorenz GM, Irby JT, Golden B.

J Econ Entomol. 2016 Apr 10. pii: tow052. [Epub ahead of print]

PMID:
27063843
27.

Ibrutinib enhances chimeric antigen receptor T-cell engraftment and efficacy in leukemia.

Fraietta JA, Beckwith KA, Patel PR, Ruella M, Zheng Z, Barrett DM, Lacey SF, Melenhorst JJ, McGettigan SE, Cook DR, Zhang C, Xu J, Do P, Hulitt J, Kudchodkar SB, Cogdill AP, Gill S, Porter DL, Woyach JA, Long M, Johnson AJ, Maddocks K, Muthusamy N, Levine BL, June CH, Byrd JC, Maus MV.

Blood. 2016 Mar 3;127(9):1117-27. doi: 10.1182/blood-2015-11-679134. Epub 2016 Jan 26.

28.

The Impact of Simulated Corn Earworm (Lepidoptera: Noctuidae) Damage in Indeterminate Soybean.

Adams BP, Catchot AL, Cook DR, Gore J, Musser FR, Irby JT, Golden BR.

J Econ Entomol. 2015 Jun;108(3):1072-8. doi: 10.1093/jee/tov094. Epub 2015 Apr 29.

PMID:
26470231
29.

Deep Sequencing of the Medicago truncatula Root Transcriptome Reveals a Massive and Early Interaction between Nodulation Factor and Ethylene Signals.

Larrainzar E, Riely BK, Kim SC, Carrasquilla-Garcia N, Yu HJ, Hwang HJ, Oh M, Kim GB, Surendrarao AK, Chasman D, Siahpirani AF, Penmetsa RV, Lee GS, Kim N, Roy S, Mun JH, Cook DR.

Plant Physiol. 2015 Sep;169(1):233-65. doi: 10.1104/pp.15.00350. Epub 2015 Jul 14.

30.

CSGM Designer: a platform for designing cross-species intron-spanning genic markers linked with genome information of legumes.

Kim JH, Lee C, Hyung D, Jo YJ, Park JS, Cook DR, Choi HK.

Plant Methods. 2015 Apr 18;11:30. doi: 10.1186/s13007-015-0074-6. eCollection 2015.

31.
32.

Genetic mapping of legume orthologs reveals high conservation of synteny between lentil species and the sequenced genomes of Medicago and chickpea.

Gujaria-Verma N, Vail SL, Carrasquilla-Garcia N, Penmetsa RV, Cook DR, Farmer AD, Vandenberg A, Bett KE.

Front Plant Sci. 2014 Dec 5;5:676. doi: 10.3389/fpls.2014.00676. eCollection 2014.

33.

The ecological genomic basis of salinity adaptation in Tunisian Medicago truncatula.

Friesen ML, von Wettberg EJ, Badri M, Moriuchi KS, Barhoumi F, Chang PL, Cuellar-Ortiz S, Cordeiro MA, Vu WT, Arraouadi S, Djébali N, Zribi K, Badri Y, Porter SS, Aouani ME, Cook DR, Strauss SY, Nuzhdin SV.

BMC Genomics. 2014 Dec 22;15:1160. doi: 10.1186/1471-2164-15-1160.

34.

Liberal versus restrictive blood transfusion strategy: 3-year survival and cause of death results from the FOCUS randomised controlled trial.

Carson JL, Sieber F, Cook DR, Hoover DR, Noveck H, Chaitman BR, Fleisher L, Beaupre L, Macaulay W, Rhoads GG, Paris B, Zagorin A, Sanders DW, Zakriya KJ, Magaziner J.

Lancet. 2015 Mar 28;385(9974):1183-9. doi: 10.1016/S0140-6736(14)62286-8. Epub 2014 Dec 9.

35.

Back to the wilds: tapping evolutionary adaptations for resilient crops through systematic hybridization with crop wild relatives.

Warschefsky E, Penmetsa RV, Cook DR, von Wettberg EJ.

Am J Bot. 2014 Oct;101(10):1791-800. doi: 10.3732/ajb.1400116. Epub 2014 Oct 8. Review.

36.

Cross-family translational genomics of abiotic stress-responsive genes between Arabidopsis and Medicago truncatula.

Hyung D, Lee C, Kim JH, Yoo D, Seo YS, Jeong SC, Lee JH, Chung Y, Jung KH, Cook DR, Choi HK.

PLoS One. 2014 Mar 27;9(3):e91721. doi: 10.1371/journal.pone.0091721. eCollection 2014.

37.

Population differentiation for germination and early seedling root growth traits under saline conditions in the annual legume Medicago truncatula (Fabaceae).

Cordeiro MA, Moriuchi KS, Fotinos TD, Miller KE, Nuzhdin SV, von Wettberg EJ, Cook DR.

Am J Bot. 2014 Mar;101(3):488-98. doi: 10.3732/ajb.1300285. Epub 2014 Mar 17.

38.

Antiretroviral drugs induce oxidative stress and neuronal damage in the central nervous system.

Akay C, Cooper M, Odeleye A, Jensen BK, White MG, Vassoler F, Gannon PJ, Mankowski J, Dorsey JL, Buch AM, Cross SA, Cook DR, Peña MM, Andersen ES, Christofidou-Solomidou M, Lindl KA, Zink MC, Clements J, Pierce RC, Kolson DL, Jordan-Sciutto KL.

J Neurovirol. 2014 Feb;20(1):39-53. doi: 10.1007/s13365-013-0227-1. Epub 2014 Jan 14.

39.

The Role of Ect2 Nuclear RhoGEF Activity in Ovarian Cancer Cell Transformation.

Huff LP, Decristo MJ, Trembath D, Kuan PF, Yim M, Liu J, Cook DR, Miller CR, Der CJ, Cox AD.

Genes Cancer. 2013 Nov;4(11-12):460-75. doi: 10.1177/1947601913514851.

40.

The CCAAT box-binding transcription factor NF-YA1 controls rhizobial infection.

Laporte P, Lepage A, Fournier J, Catrice O, Moreau S, Jardinaud MF, Mun JH, Larrainzar E, Cook DR, Gamas P, Niebel A.

J Exp Bot. 2014 Feb;65(2):481-94. doi: 10.1093/jxb/ert392. Epub 2013 Dec 6.

41.

Rho guanine nucleotide exchange factors: regulators of Rho GTPase activity in development and disease.

Cook DR, Rossman KL, Der CJ.

Oncogene. 2014 Jul 31;33(31):4021-35. doi: 10.1038/onc.2013.362. Epub 2013 Sep 16. Review.

42.

Water deficit modulates the response of Vitis vinifera to the Pierce's disease pathogen Xylella fastidiosa.

Choi HK, Iandolino A, da Silva FG, Cook DR.

Mol Plant Microbe Interact. 2013 Jun;26(6):643-57. doi: 10.1094/MPMI-09-12-0217-R.

43.

Development of a plant-based threshold for tarnished plant bug (Hemiptera: Miridae) in cotton.

Gore J, Catchot A, Musser F, Greene J, Leonard BR, Cook DR, Snodgrass GL, Jackson R.

J Econ Entomol. 2012 Dec;105(6):2007-14.

PMID:
23356065
44.

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement.

Varshney RK, Song C, Saxena RK, Azam S, Yu S, Sharpe AG, Cannon S, Baek J, Rosen BD, Tar'an B, Millan T, Zhang X, Ramsay LD, Iwata A, Wang Y, Nelson W, Farmer AD, Gaur PM, Soderlund C, Penmetsa RV, Xu C, Bharti AK, He W, Winter P, Zhao S, Hane JK, Carrasquilla-Garcia N, Condie JA, Upadhyaya HD, Luo MC, Thudi M, Gowda CL, Singh NP, Lichtenzveig J, Gali KK, Rubio J, Nadarajan N, Dolezel J, Bansal KC, Xu X, Edwards D, Zhang G, Kahl G, Gil J, Singh KB, Datta SK, Jackson SA, Wang J, Cook DR.

Nat Biotechnol. 2013 Mar;31(3):240-6. doi: 10.1038/nbt.2491. Epub 2013 Jan 27.

45.

Isolation and characterization of nucleotide-binding site resistance gene homologues in common bean (Phaseolus vulgaris).

Garzón LN, Oliveros OA, Rosen B, Ligarreto GA, Cook DR, Blair MW.

Phytopathology. 2013 Feb;103(2):156-68. doi: 10.1094/PHYTO-07-12-0180-R.

46.

A high-throughput SNP marker system for parental polymorphism screening, and diversity analysis in common bean (Phaseolus vulgaris L.).

Blair MW, Cortés AJ, Penmetsa RV, Farmer A, Carrasquilla-Garcia N, Cook DR.

Theor Appl Genet. 2013 Feb;126(2):535-48. doi: 10.1007/s00122-012-1999-z. Epub 2012 Nov 3.

PMID:
23124389
47.

Large-scale development of cost-effective single-nucleotide polymorphism marker assays for genetic mapping in pigeonpea and comparative mapping in legumes.

Saxena RK, Penmetsa RV, Upadhyaya HD, Kumar A, Carrasquilla-Garcia N, Schlueter JA, Farmer A, Whaley AM, Sarma BK, May GD, Cook DR, Varshney RK.

DNA Res. 2012 Dec;19(6):449-61. doi: 10.1093/dnares/dss025. Epub 2012 Oct 26.

48.

Development of tools for the biochemical characterization of the symbiotic receptor-like kinase DMI2.

Riely BK, Larrainzar E, Haney CH, Mun JH, Gil-Quintana E, González EM, Yu HJ, Tricoli D, Ehrhardt DW, Long SR, Cook DR.

Mol Plant Microbe Interact. 2013 Feb;26(2):216-26. doi: 10.1094/MPMI-10-11-0276.

49.

An intra-specific consensus genetic map of pigeonpea [Cajanus cajan (L.) Millspaugh] derived from six mapping populations.

Bohra A, Saxena RK, Gnanesh BN, Saxena K, Byregowda M, Rathore A, Kavikishor PB, Cook DR, Varshney RK.

Theor Appl Genet. 2012 Oct;125(6):1325-38. doi: 10.1007/s00122-012-1916-5. Epub 2012 Jul 8.

50.

Genetic patterns of domestication in pigeonpea (Cajanus cajan (L.) Millsp.) and wild Cajanus relatives.

Kassa MT, Penmetsa RV, Carrasquilla-Garcia N, Sarma BK, Datta S, Upadhyaya HD, Varshney RK, von Wettberg EJ, Cook DR.

PLoS One. 2012;7(6):e39563. doi: 10.1371/journal.pone.0039563. Epub 2012 Jun 22.

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