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Items: 1 to 50 of 138

1.

α-Globin pre-mRNA splicing, revisited.

Conboy JG.

Blood. 2019 May 23;133(21):2250-2251. doi: 10.1182/blood-2019-03-901108. No abstract available.

2.

Mechanistic Investigation of HIV-1 Gag Association with Lipid Membranes.

Tran RJ, Lalonde MS, Sly KL, Conboy JC.

J Phys Chem B. 2019 Jun 6;123(22):4673-4687. doi: 10.1021/acs.jpcb.9b02655. Epub 2019 May 28.

PMID:
31084006
3.

An important class of intron retention events in human erythroblasts is regulated by cryptic exons proposed to function as splicing decoys.

Parra M, Booth BW, Weiszmann R, Yee B, Yeo GW, Brown JB, Celniker SE, Conboy JG.

RNA. 2018 Sep;24(9):1255-1265. doi: 10.1261/rna.066951.118. Epub 2018 Jun 29.

4.

Circulating primitive erythroblasts establish a functional, protein 4.1R-dependent cytoskeletal network prior to enucleating.

Huang YS, Delgadillo LF, Cyr KH, Kingsley PD, An X, McGrath KE, Mohandas N, Conboy JG, Waugh RE, Wan J, Palis J.

Sci Rep. 2017 Jul 12;7(1):5164. doi: 10.1038/s41598-017-05498-4.

5.

Second Harmonic Correlation Spectroscopy: Theory and Principles for Determining Surface Binding Kinetics.

Sly KL, Conboy JC.

Appl Spectrosc. 2017 Jun;71(6):1368-1379. doi: 10.1177/0003702816681797. Epub 2016 Dec 22.

PMID:
28534678
6.

Applications of Surface Second Harmonic Generation in Biological Sensing.

Tran RJ, Sly KL, Conboy JC.

Annu Rev Anal Chem (Palo Alto Calif). 2017 Jun 12;10(1):387-414. doi: 10.1146/annurev-anchem-071015-041453. Epub 2017 Mar 16. Review.

PMID:
28301745
7.

RNA splicing during terminal erythropoiesis.

Conboy JG.

Curr Opin Hematol. 2017 May;24(3):215-221. doi: 10.1097/MOH.0000000000000329. Review.

8.

The Ins and Outs of Lipid Flip-Flop.

Allhusen JS, Conboy JC.

Acc Chem Res. 2017 Jan 17;50(1):58-65. doi: 10.1021/acs.accounts.6b00435. Epub 2016 Dec 13.

PMID:
27959517
9.

Developmental regulation of RNA processing by Rbfox proteins.

Conboy JG.

Wiley Interdiscip Rev RNA. 2017 Mar;8(2). doi: 10.1002/wrna.1398. Epub 2016 Oct 17. Review.

10.

Structural Origins of Cholesterol Accelerated Lipid Flip-Flop Studied by Sum-Frequency Vibrational Spectroscopy.

Allhusen JS, Kimball DR, Conboy JC.

J Phys Chem B. 2016 Mar 31;120(12):3157-68. doi: 10.1021/acs.jpcb.6b01254. Epub 2016 Mar 22.

PMID:
26978577
11.

A dynamic intron retention program enriched in RNA processing genes regulates gene expression during terminal erythropoiesis.

Pimentel H, Parra M, Gee SL, Mohandas N, Pachter L, Conboy JG.

Nucleic Acids Res. 2016 Jan 29;44(2):838-51. doi: 10.1093/nar/gkv1168. Epub 2015 Nov 3.

12.

Case study. Warm and dead? Commentary.

Miles JK, Conboy JA.

Hastings Cent Rep. 2015 Sep-Oct;45(5):9-10. No abstract available.

PMID:
26516643
13.

Phosphatidylglycerol Flip-Flop Suppression due to Headgroup Charge Repulsion.

Brown KL, Conboy JC.

J Phys Chem B. 2015 Aug 13;119(32):10252-60. doi: 10.1021/acs.jpcb.5b05523. Epub 2015 Aug 4.

PMID:
26202012
14.

Determination of multivalent protein-ligand binding kinetics by second-harmonic correlation spectroscopy.

Sly KL, Conboy JC.

Anal Chem. 2014 Nov 18;86(22):11045-54. doi: 10.1021/ac500094v. Epub 2014 Oct 29.

15.

A dynamic alternative splicing program regulates gene expression during terminal erythropoiesis.

Pimentel H, Parra M, Gee S, Ghanem D, An X, Li J, Mohandas N, Pachter L, Conboy JG.

Nucleic Acids Res. 2014 Apr;42(6):4031-42. doi: 10.1093/nar/gkt1388. Epub 2014 Jan 17.

16.

Measuring selective estrogen receptor modulator (SERM)-membrane interactions with second harmonic generation.

Stokes GY, Conboy JC.

J Am Chem Soc. 2014 Jan 29;136(4):1409-17. doi: 10.1021/ja409250y. Epub 2014 Jan 21.

17.

Preparation and characterization of conductive and transparent ruthenium dioxide sol-gel films.

Allhusen JS, Conboy JC.

ACS Appl Mater Interfaces. 2013 Nov 27;5(22):11683-91. doi: 10.1021/am403219p. Epub 2013 Nov 12.

PMID:
24221640
18.

Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges.

Lovci MT, Ghanem D, Marr H, Arnold J, Gee S, Parra M, Liang TY, Stark TJ, Gehman LT, Hoon S, Massirer KB, Pratt GA, Black DL, Gray JW, Conboy JG, Yeo GW.

Nat Struct Mol Biol. 2013 Dec;20(12):1434-42. doi: 10.1038/nsmb.2699. Epub 2013 Nov 10.

19.

Lipid flip-flop in binary membranes composed of phosphatidylserine and phosphatidylcholine.

Brown KL, Conboy JC.

J Phys Chem B. 2013 Dec 5;117(48):15041-50. doi: 10.1021/jp409672q. Epub 2013 Nov 22.

PMID:
24200035
20.

Second harmonic correlation spectroscopy: a method for determining surface binding kinetics and thermodynamics.

Sly KL, Mok SW, Conboy JC.

Anal Chem. 2013 Sep 3;85(17):8429-35. doi: 10.1021/ac4018742. Epub 2013 Aug 22.

PMID:
23927733
21.

The effect of cholesterol on the intrinsic rate of lipid flip-flop as measured by sum-frequency vibrational spectroscopy.

Liu J, Brown KL, Conboy JC.

Faraday Discuss. 2013;161:45-61; discussion 113-50.

PMID:
23805737
22.

Lens-less surface second harmonic imaging.

Sly KL, Nguyen TT, Conboy JC.

Opt Express. 2012 Sep 24;20(20):21953-67. doi: 10.1364/OE.20.021953.

23.

A simplified sum-frequency vibrational imaging setup used for imaging lipid bilayer arrays.

Smith KA, Conboy JC.

Anal Chem. 2012 Oct 2;84(19):8122-6. doi: 10.1021/ac301290e. Epub 2012 Sep 14.

24.

Deep intron elements mediate nested splicing events at consecutive AG dinucleotides to regulate alternative 3' splice site choice in vertebrate 4.1 genes.

Parra MK, Gallagher TL, Amacher SL, Mohandas N, Conboy JG.

Mol Cell Biol. 2012 Jun;32(11):2044-53. doi: 10.1128/MCB.05716-11. Epub 2012 Apr 2.

25.

Deconstruction of activity-dependent covalent modification of heme in human neutrophil myeloperoxidase by multistage mass spectrometry (MS(4)).

Geoghegan KF, Varghese AH, Feng X, Bessire AJ, Conboy JJ, Ruggeri RB, Ahn K, Spath SN, Filippov SV, Conrad SJ, Carpino PA, Guimarães CR, Vajdos FF.

Biochemistry. 2012 Mar 13;51(10):2065-77. doi: 10.1021/bi201872j. Epub 2012 Mar 1.

PMID:
22352991
26.
27.

Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions.

Gallagher TL, Arribere JA, Geurts PA, Exner CR, McDonald KL, Dill KK, Marr HL, Adkar SS, Garnett AT, Amacher SL, Conboy JG.

Dev Biol. 2011 Nov 15;359(2):251-61. doi: 10.1016/j.ydbio.2011.08.025. Epub 2011 Sep 7.

28.

High-throughput screening of drug-lipid membrane interactions via counter-propagating second harmonic generation imaging.

Nguyen TT, Conboy JC.

Anal Chem. 2011 Aug 1;83(15):5979-88. doi: 10.1021/ac2009614. Epub 2011 Jul 6.

29.

Protein 4.1R regulates cell adhesion, spreading, migration and motility of mouse keratinocytes by modulating surface expression of beta1 integrin.

Chen L, Hughes RA, Baines AJ, Conboy J, Mohandas N, An X.

J Cell Sci. 2011 Jul 15;124(Pt 14):2478-87. doi: 10.1242/jcs.078170. Epub 2011 Jun 21.

30.

Electrostatic induction of lipid asymmetry.

Brown KL, Conboy JC.

J Am Chem Soc. 2011 Jun 15;133(23):8794-7. doi: 10.1021/ja201177k. Epub 2011 May 24.

PMID:
21595482
31.

Lack of protein 4.1G causes altered expression and localization of the cell adhesion molecule nectin-like 4 in testis and can cause male infertility.

Yang S, Weng H, Chen L, Guo X, Parra M, Conboy J, Debnath G, Lambert AJ, Peters LL, Baines AJ, Mohandas N, An X.

Mol Cell Biol. 2011 Jun;31(11):2276-86. doi: 10.1128/MCB.01105-10. Epub 2011 Apr 11.

32.

Using micropatterned lipid bilayer arrays to measure the effect of membrane composition on merocyanine 540 binding.

Smith KA, Conboy JC.

Biochim Biophys Acta. 2011 Jun;1808(6):1611-7. doi: 10.1016/j.bbamem.2011.02.017. Epub 2011 Mar 1.

33.

Efficient in vivo manipulation of alternative pre-mRNA splicing events using antisense morpholinos in mice.

Parra MK, Gee S, Mohandas N, Conboy JG.

J Biol Chem. 2011 Feb 25;286(8):6033-9. doi: 10.1074/jbc.M110.158154. Epub 2010 Dec 14.

34.

Comprehensive characterization of expression patterns of protein 4.1 family members in mouse adrenal gland: implications for functions.

Wang H, Liu C, Debnath G, Baines AJ, Conboy JG, Mohandas N, An X.

Histochem Cell Biol. 2010 Oct;134(4):411-20. doi: 10.1007/s00418-010-0749-z. Epub 2010 Oct 2.

PMID:
20890708
35.

Exon-level microarray analyses identify alternative splicing programs in breast cancer.

Lapuk A, Marr H, Jakkula L, Pedro H, Bhattacharya S, Purdom E, Hu Z, Simpson K, Pachter L, Durinck S, Wang N, Parvin B, Fontenay G, Speed T, Garbe J, Stampfer M, Bayandorian H, Dorton S, Clark TA, Schweitzer A, Wyrobek A, Feiler H, Spellman P, Conboy J, Gray JW.

Mol Cancer Res. 2010 Jul;8(7):961-74. doi: 10.1158/1541-7786.MCR-09-0528. Epub 2010 Jul 6.

37.

Stable, ligand-doped, poly(bis-SorbPC) lipid bilayer arrays for protein binding and detection.

Joubert JR, Smith KA, Johnson E, Keogh JP, Wysocki VH, Gale BK, Conboy JC, Saavedra SS.

ACS Appl Mater Interfaces. 2009 Jun;1(6):1310-5. doi: 10.1021/am900177p.

38.

Free energy and entropy of activation for phospholipid flip-flop in planar supported lipid bilayers.

Anglin TC, Cooper MP, Li H, Chandler K, Conboy JC.

J Phys Chem B. 2010 Feb 11;114(5):1903-14. doi: 10.1021/jp909134g.

PMID:
20073520
39.

Kinetics and thermodynamics of flip-flop in binary phospholipid membranes measured by sum-frequency vibrational spectroscopy.

Anglin TC, Conboy JC.

Biochemistry. 2009 Nov 3;48(43):10220-34. doi: 10.1021/bi901096j.

PMID:
19746969
40.

Phospholipid flip-flop modulated by transmembrane peptides WALP and melittin.

Anglin TC, Brown KL, Conboy JC.

J Struct Biol. 2009 Oct;168(1):37-52. doi: 10.1016/j.jsb.2009.06.001. Epub 2009 Jun 7.

41.

Alternative pre-mRNA splicing switches modulate gene expression in late erythropoiesis.

Yamamoto ML, Clark TA, Gee SL, Kang JA, Schweitzer AC, Wickrema A, Conboy JG.

Blood. 2009 Apr 2;113(14):3363-70. doi: 10.1182/blood-2008-05-160325. Epub 2009 Feb 4.

42.

Label-free detection of drug-membrane association using ultraviolet-visible sum-frequency generation.

Nguyen TT, Rembert K, Conboy JC.

J Am Chem Soc. 2009 Feb 4;131(4):1401-3. doi: 10.1021/ja8070607. Erratum in: J Am Chem Soc. 2011 Apr 20;133(15):6096-7.

43.
44.

Micropatterned fluid lipid bilayer arrays created using a continuous flow microspotter.

Smith KA, Gale BK, Conboy JC.

Anal Chem. 2008 Nov 1;80(21):7980-7. doi: 10.1021/ac800860u. Epub 2008 Oct 8.

45.

Modification of amyloid-beta(1-40) by a protease inhibitor creates risk of error in mass spectrometric quantitation of amyloid-beta(1-42).

Conboy JJ, Wood KG, Lame ME, Durham RA, Geoghegan KF.

Anal Biochem. 2008 Nov 15;382(2):147-9. doi: 10.1016/j.ab.2008.07.033. Epub 2008 Aug 5.

PMID:
18706385
46.

FIRMA: a method for detection of alternative splicing from exon array data.

Purdom E, Simpson KM, Robinson MD, Conboy JG, Lapuk AV, Speed TP.

Bioinformatics. 2008 Aug 1;24(15):1707-14. doi: 10.1093/bioinformatics/btn284. Epub 2008 Jun 23.

47.

Lateral pressure dependence of the phospholipid transmembrane diffusion rate in planar-supported lipid bilayers.

Anglin TC, Conboy JC.

Biophys J. 2008 Jul;95(1):186-93. doi: 10.1529/biophysj.107.118976. Epub 2008 Mar 13.

48.

Intrasplicing coordinates alternative first exons with alternative splicing in the protein 4.1R gene.

Parra MK, Tan JS, Mohandas N, Conboy JG.

EMBO J. 2008 Jan 9;27(1):122-31. Epub 2007 Dec 13.

49.

A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing.

Das D, Clark TA, Schweitzer A, Yamamoto M, Marr H, Arribere J, Minovitsky S, Poliakov A, Dubchak I, Blume JE, Conboy JG.

Nucleic Acids Res. 2007;35(14):4845-57. Epub 2007 Jul 10.

50.

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