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Best matches for Colomé-Tatché M[au]:

Histone propionylation is a mark of active chromatin. Kebede AF et al. Nat Struct Mol Biol. (2017)

MLL2 conveys transcription-independent H3K4 trimethylation in oocytes. Hanna CW et al. Nat Struct Mol Biol. (2018)

Genetic sources of population epigenomic variation. Taudt A et al. Nat Rev Genet. (2016)

Search results

Items: 28

1.

Widespread long-range cis-regulatory elements in the maize genome.

Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, Buckler ES, Gallavotti A, Springer NM, Schmitz RJ, Zhang X.

Nat Plants. 2019 Dec;5(12):1237-1249. doi: 10.1038/s41477-019-0547-0. Epub 2019 Nov 18.

PMID:
31740773
2.

Endogenous retroviral insertions drive non-canonical imprinting in extra-embryonic tissues.

Hanna CW, Pérez-Palacios R, Gahurova L, Schubert M, Krueger F, Biggins L, Andrews S, Colomé-Tatché M, Bourc'his D, Dean W, Kelsey G.

Genome Biol. 2019 Oct 29;20(1):225. doi: 10.1186/s13059-019-1833-x.

3.

Gene networks in cancer are biased by aneuploidies and sample impurities.

Schubert M, Colomé-Tatché M, Foijer F.

Biochim Biophys Acta Gene Regul Mech. 2019 Oct 23:194444. doi: 10.1016/j.bbagrm.2019.194444. [Epub ahead of print] Review.

PMID:
31654805
4.

breakpointR: an R/Bioconductor package to localize strand state changes in Strand-seq data.

Porubsky D, Sanders AD, Taudt A, Colomé-Tatché M, Lansdorp PM, Guryev V.

Bioinformatics. 2019 Aug 30. pii: btz681. doi: 10.1093/bioinformatics/btz681. [Epub ahead of print]

PMID:
31504176
5.

Quantification of Aneuploidy in Mammalian Systems.

van den Bos H, Bakker B, Taudt A, Guryev V, Colomé-Tatché M, Lansdorp PM, Foijer F, Spierings DCJ.

Methods Mol Biol. 2019;1896:159-190. doi: 10.1007/978-1-4939-8931-7_15.

PMID:
30474848
6.

METHimpute: imputation-guided construction of complete methylomes from WGBS data.

Taudt A, Roquis D, Vidalis A, Wardenaar R, Johannes F, Colomé-Tatché M.

BMC Genomics. 2018 Jun 7;19(1):444. doi: 10.1186/s12864-018-4641-x.

7.

MLL2 conveys transcription-independent H3K4 trimethylation in oocytes.

Hanna CW, Taudt A, Huang J, Gahurova L, Kranz A, Andrews S, Dean W, Stewart AF, Colomé-Tatché M, Kelsey G.

Nat Struct Mol Biol. 2018 Jan;25(1):73-82. doi: 10.1038/s41594-017-0013-5. Epub 2018 Jan 1.

PMID:
29323282
8.

Histone propionylation is a mark of active chromatin.

Kebede AF, Nieborak A, Shahidian LZ, Le Gras S, Richter F, Gómez DA, Baltissen MP, Meszaros G, Magliarelli HF, Taudt A, Margueron R, Colomé-Tatché M, Ricci R, Daujat S, Vermeulen M, Mittler G, Schneider R.

Nat Struct Mol Biol. 2017 Dec;24(12):1048-1056. doi: 10.1038/nsmb.3490. Epub 2017 Oct 23.

PMID:
29058708
9.

Ecological plant epigenetics: Evidence from model and non-model species, and the way forward.

Richards CL, Alonso C, Becker C, Bossdorf O, Bucher E, Colomé-Tatché M, Durka W, Engelhardt J, Gaspar B, Gogol-Döring A, Grosse I, van Gurp TP, Heer K, Kronholm I, Lampei C, Latzel V, Mirouze M, Opgenoorth L, Paun O, Prohaska SJ, Rensing SA, Stadler PF, Trucchi E, Ullrich K, Verhoeven KJF.

Ecol Lett. 2017 Dec;20(12):1576-1590. doi: 10.1111/ele.12858. Epub 2017 Oct 12. Review.

PMID:
29027325
10.

Copy number alterations assessed at the single-cell level revealed mono- and polyclonal seeding patterns of distant metastasis in a small-cell lung cancer patient.

Ferronika P, van den Bos H, Taudt A, Spierings DCJ, Saber A, Hiltermann TJN, Kok K, Porubsky D, van der Wekken AJ, Timens W, Foijer F, Colomé-Tatché M, Groen HJM, Lansdorp PM, van den Berg A.

Ann Oncol. 2017 Jul 1;28(7):1668-1670. doi: 10.1093/annonc/mdx182. No abstract available.

PMID:
28419234
11.

Erratum to: Single-cell whole genome sequencing reveals no evidence for common aneuploidy in normal and Alzheimer's disease neurons.

van den Bos H, Spierings DC, Taudt A, Bakker B, Porubský D, Falconer E, Novoa C, Halsema N, Kazemier HG, Hoekstra-Wakker K, Guryev V, den Dunnen WF, Foijer F, Colomé-Tatché M, Boddeke HW, Landsdorp PM.

Genome Biol. 2016 Jun 30;17(1):143. No abstract available.

12.

Single-cell sequencing reveals karyotype heterogeneity in murine and human malignancies.

Bakker B, Taudt A, Belderbos ME, Porubsky D, Spierings DC, de Jong TV, Halsema N, Kazemier HG, Hoekstra-Wakker K, Bradley A, de Bont ES, van den Berg A, Guryev V, Lansdorp PM, Colomé-Tatché M, Foijer F.

Genome Biol. 2016 May 31;17(1):115. doi: 10.1186/s13059-016-0971-7.

13.

Genetic sources of population epigenomic variation.

Taudt A, Colomé-Tatché M, Johannes F.

Nat Rev Genet. 2016 Jun;17(6):319-32. doi: 10.1038/nrg.2016.45. Epub 2016 May 9. Review.

PMID:
27156976
14.

Signatures of Dobzhansky-Muller Incompatibilities in the Genomes of Recombinant Inbred Lines.

Colomé-Tatché M, Johannes F.

Genetics. 2016 Feb;202(2):825-41. doi: 10.1534/genetics.115.179473. Epub 2015 Dec 17.

15.

Rate, spectrum, and evolutionary dynamics of spontaneous epimutations.

van der Graaf A, Wardenaar R, Neumann DA, Taudt A, Shaw RG, Jansen RC, Schmitz RJ, Colomé-Tatché M, Johannes F.

Proc Natl Acad Sci U S A. 2015 May 26;112(21):6676-81. doi: 10.1073/pnas.1424254112. Epub 2015 May 11.

16.

histoneHMM: Differential analysis of histone modifications with broad genomic footprints.

Heinig M, Colomé-Tatché M, Taudt A, Rintisch C, Schafer S, Pravenec M, Hubner N, Vingron M, Johannes F.

BMC Bioinformatics. 2015 Feb 22;16:60. doi: 10.1186/s12859-015-0491-6.

17.

Natural variation of histone modification and its impact on gene expression in the rat genome.

Rintisch C, Heinig M, Bauerfeind A, Schafer S, Mieth C, Patone G, Hummel O, Chen W, Cook S, Cuppen E, Colomé-Tatché M, Johannes F, Jansen RC, Neil H, Werner M, Pravenec M, Vingron M, Hubner N.

Genome Res. 2014 Jun;24(6):942-53. doi: 10.1101/gr.169029.113. Epub 2014 May 2.

18.

Mapping the epigenetic basis of complex traits.

Cortijo S, Wardenaar R, Colomé-Tatché M, Gilly A, Etcheverry M, Labadie K, Caillieux E, Hospital F, Aury JM, Wincker P, Roudier F, Jansen RC, Colot V, Johannes F.

Science. 2014 Mar 7;343(6175):1145-8. doi: 10.1126/science.1248127. Epub 2014 Feb 6.

PMID:
24505129
19.

Genome-wide analysis of DNA methylation in Arabidopsis using MeDIP-chip.

Cortijo S, Wardenaar R, Colomé-Tatché M, Johannes F, Colot V.

Methods Mol Biol. 2014;1112:125-49. doi: 10.1007/978-1-62703-773-0_9.

PMID:
24478012
20.

Evaluation of MeDIP-chip in the context of whole-genome bisulfite sequencing (WGBS-seq) in Arabidopsis.

Wardenaar R, Liu H, Colot V, Colomé-Tatché M, Johannes F.

Methods Mol Biol. 2013;1067:203-24. doi: 10.1007/978-1-62703-607-8_13.

PMID:
23975794
21.

MeDIP-HMM: genome-wide identification of distinct DNA methylation states from high-density tiling arrays.

Seifert M, Cortijo S, Colomé-Tatché M, Johannes F, Roudier F, Colot V.

Bioinformatics. 2012 Nov 15;28(22):2930-9. doi: 10.1093/bioinformatics/bts562. Epub 2012 Sep 17.

PMID:
22989518
22.

Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation.

Colomé-Tatché M, Cortijo S, Wardenaar R, Morgado L, Lahouze B, Sarazin A, Etcheverry M, Martin A, Feng S, Duvernois-Berthet E, Labadie K, Wincker P, Jacobsen SE, Jansen RC, Colot V, Johannes F.

Proc Natl Acad Sci U S A. 2012 Oct 2;109(40):16240-5. doi: 10.1073/pnas.1212955109. Epub 2012 Sep 17.

23.

Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature.

Roux F, Colomé-Tatché M, Edelist C, Wardenaar R, Guerche P, Hospital F, Colot V, Jansen RC, Johannes F.

Genetics. 2011 Aug;188(4):1015-7. doi: 10.1534/genetics.111.128744. Epub 2011 May 19.

24.

Parametric excitation of a 1D gas in integrable and nonintegrable cases.

Colomé-Tatché M, Petrov DS.

Phys Rev Lett. 2011 Mar 25;106(12):125302. Epub 2011 Mar 23.

PMID:
21517321
25.

Concerning epigenetics and inbreeding.

Johannes F, Colomé-Tatché M.

Nat Rev Genet. 2011 May;12(5):376. doi: 10.1038/nrg2664-c3. Epub 2011 Mar 22. No abstract available.

PMID:
21423241
26.

Quantitative epigenetics through epigenomic perturbation of isogenic lines.

Johannes F, Colomé-Tatché M.

Genetics. 2011 May;188(1):215-27. doi: 10.1534/genetics.111.127118. Epub 2011 Mar 8.

27.

Mott-insulator phases of spin-3/2 fermions in the presence of quadratic Zeeman coupling.

Rodríguez K, Argüelles A, Colomé-Tatché M, Vekua T, Santos L.

Phys Rev Lett. 2010 Jul 30;105(5):050402. Epub 2010 Jul 27.

PMID:
20867897
28.

Comparing genome-wide chromatin profiles using ChIP-chip or ChIP-seq.

Johannes F, Wardenaar R, Colomé-Tatché M, Mousson F, de Graaf P, Mokry M, Guryev V, Timmers HT, Cuppen E, Jansen RC.

Bioinformatics. 2010 Apr 15;26(8):1000-6. doi: 10.1093/bioinformatics/btq087. Epub 2010 Mar 5.

PMID:
20208068

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