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Toward Image Data-Driven Predictive Modeling for Guiding Thermal Ablative Therapy.

Collins JA, Heiselman JS, Clements LW, Weis JA, Brown DB, Miga MI.

IEEE Trans Biomed Eng. 2019 Sep 5. doi: 10.1109/TBME.2019.2939686. [Epub ahead of print]


Consistently dated Atlantic sediment cores over the last 40 thousand years.

Waelbroeck C, Lougheed BC, Vazquez Riveiros N, Missiaen L, Pedro J, Dokken T, Hajdas I, Wacker L, Abbott P, Dumoulin JP, Thil F, Eynaud F, Rossignol L, Fersi W, Albuquerque AL, Arz H, Austin WEN, Came R, Carlson AE, Collins JA, Dennielou B, Desprat S, Dickson A, Elliot M, Farmer C, Giraudeau J, Gottschalk J, Henderiks J, Hughen K, Jung S, Knutz P, Lebreiro S, Lund DC, Lynch-Stieglitz J, Malaizé B, Marchitto T, Martínez-Méndez G, Mollenhauer G, Naughton F, Nave S, Nürnberg D, Oppo D, Peck V, Peeters FJC, Penaud A, Portilho-Ramos RDC, Repschläger J, Roberts J, Rühlemann C, Salgueiro E, Sanchez Goni MF, Schönfeld J, Scussolini P, Skinner LC, Skonieczny C, Thornalley D, Toucanne S, Rooij DV, Vidal L, Voelker AHL, Wary M, Weldeab S, Ziegler M.

Sci Data. 2019 Sep 2;6(1):165. doi: 10.1038/s41597-019-0173-8.


Visual cognition in non-amnestic Alzheimer's disease: Relations to tau, amyloid, and cortical atrophy.

Putcha D, Brickhouse M, Touroutoglou A, Collins JA, Quimby M, Wong B, Eldaief M, Schultz A, El Fakhri G, Johnson K, Dickerson BC, McGinnis SM.

Neuroimage Clin. 2019;23:101889. doi: 10.1016/j.nicl.2019.101889. Epub 2019 Jun 4.


Multiphysics modeling toward enhanced guidance in hepatic microwave ablation: a preliminary framework.

Collins JA, Heiselman JS, Clements LW, Brown DB, Miga MI.

J Med Imaging (Bellingham). 2019 Apr;6(2):025007. doi: 10.1117/1.JMI.6.2.025007. Epub 2019 May 20.


Length of Uninterrupted CAG, Independent of Polyglutamine Size, Results in Increased Somatic Instability, Hastening Onset of Huntington Disease.

Wright GEB, Collins JA, Kay C, McDonald C, Dolzhenko E, Xia Q, Bečanović K, Drögemöller BI, Semaka A, Nguyen CM, Trost B, Richards F, Bijlsma EK, Squitieri F, Ross CJD, Scherer SW, Eberle MA, Yuen RKC, Hayden MR.

Am J Hum Genet. 2019 Jun 6;104(6):1116-1126. doi: 10.1016/j.ajhg.2019.04.007. Epub 2019 May 16.


Assessment of Consistency Between Peer-Reviewed Publications and Clinical Trial Registries.

Sun LW, Lee DJ, Collins JA, Carll TC, Ramahi K, Sandy SJ, Unteriner JG, Weinberg DV.

JAMA Ophthalmol. 2019 May 1;137(5):552-556. doi: 10.1001/jamaophthalmol.2019.0312.


Heterogeneous and Highly Dynamic Interface in Plastocyanin-Cytochrome f Complex Revealed by Site-Specific 2D-IR Spectroscopy.

Ramos S, Le Sueur AL, Horness RE, Specker JT, Collins JA, Thibodeau KE, Thielges MC.

J Phys Chem B. 2019 Mar 7;123(9):2114-2122. doi: 10.1021/acs.jpcb.8b12157. Epub 2019 Feb 21.


Differential peroxiredoxin hyperoxidation regulates MAP kinase signaling in human articular chondrocytes.

Collins JA, Wood ST, Bolduc JA, Nurmalasari NPD, Chubinskaya S, Poole LB, Furdui CM, Nelson KJ, Loeser RF.

Free Radic Biol Med. 2019 Apr;134:139-152. doi: 10.1016/j.freeradbiomed.2019.01.005. Epub 2019 Jan 9.


Articular chondrocytes isolated from the knee and ankle joints of human tissue donors demonstrate similar redox-regulated MAP kinase and Akt signaling.

Collins JA, Arbeeva L, Chubinskaya S, Loeser RF.

Osteoarthritis Cartilage. 2019 Apr;27(4):703-711. doi: 10.1016/j.joca.2018.12.010. Epub 2018 Dec 24.


Site-specific 2D IR spectroscopy: a general approach for the characterization of protein dynamics with high spatial and temporal resolution.

Ramos S, Horness RE, Collins JA, Haak D, Thielges MC.

Phys Chem Chem Phys. 2019 Jan 2;21(2):780-788. doi: 10.1039/c8cp06146g.


Aplasia Cutis Congenita with Ischemic Cortical Change and Normal Array Cytogenetic Analysis with a Fetus Papyraceus Twin.

Skillen LA, Gates D, Collins JA, Saxena N, Hurrell D, McKenna K, Morrison PJ.

Fetal Pediatr Pathol. 2018 Aug;37(4):276-281. doi: 10.1080/15513815.2018.1483453. Epub 2018 Oct 1.


H2O2 oxidation of cysteine residues in c-Jun N-terminal kinase 2 (JNK2) contributes to redox regulation in human articular chondrocytes.

Nelson KJ, Bolduc JA, Wu H, Collins JA, Burke EA, Reisz JA, Klomsiri C, Wood ST, Yammani RR, Poole LB, Furdui CM, Loeser RF.

J Biol Chem. 2018 Oct 19;293(42):16376-16389. doi: 10.1074/jbc.RA118.004613. Epub 2018 Sep 6.


Reactive oxygen species, aging and articular cartilage homeostasis.

Bolduc JA, Collins JA, Loeser RF.

Free Radic Biol Med. 2019 Feb 20;132:73-82. doi: 10.1016/j.freeradbiomed.2018.08.038. Epub 2018 Aug 31. Review.


Does Joint Injury Make Young Joints Old?

Diekman BO, Collins JA, Loeser RF.

J Am Acad Orthop Surg. 2018 Nov 1;26(21):e455-e456. doi: 10.5435/JAAOS-D-18-00394. No abstract available.


Functional connectivity in category-selective brain networks after encoding predicts subsequent memory.

Collins JA, Dickerson BC.

Hippocampus. 2019 May;29(5):440-450. doi: 10.1002/hipo.23003. Epub 2018 Sep 2.


A two-million-year-long hydroclimatic context for hominin evolution in southeastern Africa.

Caley T, Extier T, Collins JA, Schefuß E, Dupont L, Malaizé B, Rossignol L, Souron A, McClymont EL, Jimenez-Espejo FJ, García-Comas C, Eynaud F, Martinez P, Roche DM, Jorry SJ, Charlier K, Wary M, Gourves PY, Billy I, Giraudeau J.

Nature. 2018 Aug;560(7716):76-79. doi: 10.1038/s41586-018-0309-6. Epub 2018 Jul 9.


Use of registered donkeys on the areas of natural constraint scheme in Ireland.

Collins JA, Wall PG, Duggan VE.

Vet Rec. 2018 Sep 8;183(9):298. doi: 10.1136/vr.104355. Epub 2018 Jun 22.


A human huntingtin SNP alters post-translational modification and pathogenic proteolysis of the protein causing Huntington disease.

Martin DDO, Kay C, Collins JA, Nguyen YT, Slama RA, Hayden MR.

Sci Rep. 2018 May 25;8(1):8096. doi: 10.1038/s41598-018-25903-w.


The Super-Seniors Study: Phenotypic characterization of a healthy 85+ population.

Halaschek-Wiener J, Tindale LC, Collins JA, Leach S, McManus B, Madden K, Meneilly G, Le ND, Connors JM, Brooks-Wilson AR.

PLoS One. 2018 May 24;13(5):e0197578. doi: 10.1371/journal.pone.0197578. eCollection 2018.


Expression of p16INK 4a is a biomarker of chondrocyte aging but does not cause osteoarthritis.

Diekman BO, Sessions GA, Collins JA, Knecht AK, Strum SL, Mitin NK, Carlson CS, Loeser RF, Sharpless NE.

Aging Cell. 2018 Aug;17(4):e12771. doi: 10.1111/acel.12771. Epub 2018 May 9.


Characterization of proximal femoral anatomy in the skeletally-immature patient.

Beutel BG, Girdler SJ, Collins JA, Otsuka NY, Chu A.

J Child Orthop. 2018 Apr 1;12(2):167-172. doi: 10.1302/1863-2548.12.180011.


The molecular epidemiology of Huntington disease is related to intermediate allele frequency and haplotype in the general population.

Kay C, Collins JA, Wright GEB, Baine F, Miedzybrodzka Z, Aminkeng F, Semaka AJ, McDonald C, Davidson M, Madore SJ, Gordon ES, Gerry NP, Cornejo-Olivas M, Squitieri F, Tishkoff S, Greenberg JL, Krause A, Hayden MR.

Am J Med Genet B Neuropsychiatr Genet. 2018 Apr;177(3):346-357. doi: 10.1002/ajmg.b.32618. Epub 2018 Feb 20.


Characterization and correction of intraoperative soft tissue deformation in image-guided laparoscopic liver surgery.

Heiselman JS, Clements LW, Collins JA, Weis JA, Simpson AL, Geevarghese SK, Kingham TP, Jarnagin WR, Miga MI.

J Med Imaging (Bellingham). 2018 Apr;5(2):021203. doi: 10.1117/1.JMI.5.2.021203. Epub 2017 Dec 14.


The neural representation of social status in the extended face-processing network.

Koski JE, Collins JA, Olson IR.

Eur J Neurosci. 2017 Dec;46(12):2795-2806. doi: 10.1111/ejn.13770. Epub 2017 Dec 8.


Rapid termination of the African Humid Period triggered by northern high-latitude cooling.

Collins JA, Prange M, Caley T, Gimeno L, Beckmann B, Mulitza S, Skonieczny C, Roche D, Schefuß E.

Nat Commun. 2017 Nov 8;8(1):1372. doi: 10.1038/s41467-017-01454-y.


Pupation Behavior and Predation on Drosophila suzukii (Diptera: Drosophilidae) Pupae in Maine Wild Blueberry Fields.

Ballman ES, Collins JA, Drummond FA.

J Econ Entomol. 2017 Dec 5;110(6):2308-2317. doi: 10.1093/jee/tox233.


Targeting aging for disease modification in osteoarthritis.

Collins JA, Diekman BO, Loeser RF.

Curr Opin Rheumatol. 2018 Jan;30(1):101-107. doi: 10.1097/BOR.0000000000000456. Review.


Geschwind Syndrome in frontotemporal lobar degeneration: Neuroanatomical and neuropsychological features over 9 years.

Veronelli L, Makaretz SJ, Quimby M, Dickerson BC, Collins JA.

Cortex. 2017 Sep;94:27-38. doi: 10.1016/j.cortex.2017.06.003. Epub 2017 Jun 27.


Deformation correction for image guided liver surgery: An intraoperative fidelity assessment.

Clements LW, Collins JA, Weis JA, Simpson AL, Kingham TP, Jarnagin WR, Miga MI.

Surgery. 2017 Sep;162(3):537-547. doi: 10.1016/j.surg.2017.04.020. Epub 2017 Jul 10.


Dynamic neural architecture for social knowledge retrieval.

Wang Y, Collins JA, Koski J, Nugiel T, Metoki A, Olson IR.

Proc Natl Acad Sci U S A. 2017 Apr 18;114(16):E3305-E3314. doi: 10.1073/pnas.1621234114. Epub 2017 Mar 13.


Improving Registration Robustness for Image-Guided Liver Surgery in a Novel Human-to-Phantom Data Framework.

Collins JA, Weis JA, Heiselman JS, Clements LW, Simpson AL, Jarnagin WR, Miga MI.

IEEE Trans Med Imaging. 2017 Jul;36(7):1502-1510. doi: 10.1109/TMI.2017.2668842. Epub 2017 Feb 13.


Focal temporal pole atrophy and network degeneration in semantic variant primary progressive aphasia.

Collins JA, Montal V, Hochberg D, Quimby M, Mandelli ML, Makris N, Seeley WW, Gorno-Tempini ML, Dickerson BC.

Brain. 2017 Feb;140(2):457-471. doi: 10.1093/brain/aww313. Epub 2016 Dec 31.


The targetable A1 Huntington disease haplotype has distinct Amerindian and European origins in Latin America.

Kay C, Tirado-Hurtado I, Cornejo-Olivas M, Collins JA, Wright G, Inca-Martinez M, Veliz-Otani D, Ketelaar ME, Slama RA, Ross CJ, Mazzetti P, Hayden MR.

Eur J Hum Genet. 2017 Feb;25(3):332-340. doi: 10.1038/ejhg.2016.169. Epub 2016 Dec 21.


Pancreatic Cytopathology.

Collins JA, Ali SZ, VandenBussche CJ.

Surg Pathol Clin. 2016 Dec;9(4):661-676. doi: 10.1016/j.path.2016.05.009. Epub 2016 Oct 12. Review.


Carcinoma Showing Thymus-Like Differentiation (CASTLE): Cytopathological Features and Differential Diagnosis.

Collins JA, Ping B, Bishop JA, Ali SZ.

Acta Cytol. 2016;60(5):421-428. Epub 2016 Sep 17.


High-resolution seismic constraints on flow dynamics in the oceanic asthenosphere.

Lin PY, Gaherty JB, Jin G, Collins JA, Lizarralde D, Evans RL, Hirth G.

Nature. 2016 Jul 28;535(7613):538-41. Epub 2016 Jul 6.


Well-differentiated fetal adenocarcinoma of the lung mimicking adenoid cystic carcinoma on fine needle aspiration: A case report.

Rerkpichaisuth V, Collins JA, Boonyaarunnate T, Ali SZ.

Diagn Cytopathol. 2016 Nov;44(11):917-920. doi: 10.1002/dc.23526. Epub 2016 Jul 4.


Huntington disease reduced penetrance alleles occur at high frequency in the general population.

Kay C, Collins JA, Miedzybrodzka Z, Madore SJ, Gordon ES, Gerry N, Davidson M, Slama RA, Hayden MR.

Neurology. 2016 Jul 19;87(3):282-8. doi: 10.1212/WNL.0000000000002858. Epub 2016 Jun 22.


More Than Meets the Eye: The Merging of Perceptual and Conceptual Knowledge in the Anterior Temporal Face Area.

Collins JA, Koski JE, Olson IR.

Front Hum Neurosci. 2016 May 2;10:189. doi: 10.3389/fnhum.2016.00189. eCollection 2016.


Ageing and the pathogenesis of osteoarthritis.

Loeser RF, Collins JA, Diekman BO.

Nat Rev Rheumatol. 2016 Jul;12(7):412-20. doi: 10.1038/nrrheum.2016.65. Epub 2016 May 19. Review.


Evaluation of model-based deformation correction in image-guided liver surgery via tracked intraoperative ultrasound.

Clements LW, Collins JA, Weis JA, Simpson AL, Adams LB, Jarnagin WR, Miga MI.

J Med Imaging (Bellingham). 2016 Jan;3(1):015003. doi: 10.1117/1.JMI.3.1.015003. Epub 2016 Mar 23.


Bone Marrow Edema: Chronic Bone Marrow Lesions of the Knee and the Association with Osteoarthritis.

Collins JA, Beutel BG, Strauss E, Youm T, Jazrawi L.

Bull Hosp Jt Dis (2013). 2016 Mar;74(1):24-36. Review.


Variation in White Matter Connectivity Predicts the Ability to Remember Faces and Discriminate Their Emotions.

Unger A, Alm KH, Collins JA, O'Leary JM, Olson IR.

J Int Neuropsychol Soc. 2016 Feb;22(2):180-90. doi: 10.1017/S1355617715001009.


Oxidative Stress Promotes Peroxiredoxin Hyperoxidation and Attenuates Pro-survival Signaling in Aging Chondrocytes.

Collins JA, Wood ST, Nelson KJ, Rowe MA, Carlson CS, Chubinskaya S, Poole LB, Furdui CM, Loeser RF.

J Biol Chem. 2016 Mar 25;291(13):6641-54. doi: 10.1074/jbc.M115.693523. Epub 2016 Jan 21.


Surgical and Transcatheter Mitral Valve Repair for Severe Chronic Mitral Regurgitation: A Review of Clinical Indications and Patient Assessment.

Vesely MR, Benitez RM, Robinson SW, Collins JA, Dawood MY, Gammie JS.

J Am Heart Assoc. 2015 Dec 11;4(12). pii: e002424. doi: 10.1161/JAHA.115.002424. Review. No abstract available.


Relating oxygen partial pressure, saturation and content: the haemoglobin-oxygen dissociation curve.

Collins JA, Rudenski A, Gibson J, Howard L, O'Driscoll R.

Breathe (Sheff). 2015 Sep;11(3):194-201. doi: 10.1183/20734735.001415. Review.


Minimally Invasive Aortic Valve Replacement.

Salenger R, Gammie JS, Collins JA.

J Card Surg. 2016 Jan;31(1):38-50. doi: 10.1111/jocs.12652. Epub 2015 Oct 15. Review.


Targeted next-generation sequencing to diagnose disorders of HDL cholesterol.

Sadananda SN, Foo JN, Toh MT, Cermakova L, Trigueros-Motos L, Chan T, Liany H, Collins JA, Gerami S, Singaraja RR, Hayden MR, Francis GA, Frohlich J, Khor CC, Brunham LR.

J Lipid Res. 2015 Oct;56(10):1993-2001. doi: 10.1194/jlr.P058891. Epub 2015 Aug 8.

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