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Items: 36

1.

Plant functional trait change across a warming tundra biome.

Bjorkman AD, Myers-Smith IH, Elmendorf SC, Normand S, Rüger N, Beck PSA, Blach-Overgaard A, Blok D, Cornelissen JHC, Forbes BC, Georges D, Goetz SJ, Guay KC, Henry GHR, HilleRisLambers J, Hollister RD, Karger DN, Kattge J, Manning P, Prevéy JS, Rixen C, Schaepman-Strub G, Thomas HJD, Vellend M, Wilmking M, Wipf S, Carbognani M, Hermanutz L, Lévesque E, Molau U, Petraglia A, Soudzilovskaia NA, Spasojevic MJ, Tomaselli M, Vowles T, Alatalo JM, Alexander HD, Anadon-Rosell A, Angers-Blondin S, Beest MT, Berner L, Björk RG, Buchwal A, Buras A, Christie K, Cooper EJ, Dullinger S, Elberling B, Eskelinen A, Frei ER, Grau O, Grogan P, Hallinger M, Harper KA, Heijmans MMPD, Hudson J, Hülber K, Iturrate-Garcia M, Iversen CM, Jaroszynska F, Johnstone JF, Jørgensen RH, Kaarlejärvi E, Klady R, Kuleza S, Kulonen A, Lamarque LJ, Lantz T, Little CJ, Speed JDM, Michelsen A, Milbau A, Nabe-Nielsen J, Nielsen SS, Ninot JM, Oberbauer SF, Olofsson J, Onipchenko VG, Rumpf SB, Semenchuk P, Shetti R, Collier LS, Street LE, Suding KN, Tape KD, Trant A, Treier UA, Tremblay JP, Tremblay M, Venn S, Weijers S, Zamin T, Boulanger-Lapointe N, Gould WA, Hik DS, Hofgaard A, Jónsdóttir IS, Jorgenson J, Klein J, Magnusson B, Tweedie C, Wookey PA, Bahn M, Blonder B, van Bodegom PM, Bond-Lamberty B, Campetella G, Cerabolini BEL, Chapin FS 3rd, Cornwell WK, Craine J, Dainese M, de Vries FT, Díaz S, Enquist BJ, Green W, Milla R, Niinemets Ü, Onoda Y, Ordoñez JC, Ozinga WA, Penuelas J, Poorter H, Poschlod P, Reich PB, Sandel B, Schamp B, Sheremetev S, Weiher E.

Nature. 2018 Oct;562(7725):57-62. doi: 10.1038/s41586-018-0563-7. Epub 2018 Sep 26.

2.

CSF1 Overexpression Promotes High-Grade Glioma Formation without Impacting the Polarization Status of Glioma-Associated Microglia and Macrophages.

De I, Steffen MD, Clark PA, Patros CJ, Sokn E, Bishop SM, Litscher S, Maklakova VI, Kuo JS, Rodriguez FJ, Collier LS.

Cancer Res. 2016 May 1;76(9):2552-60. doi: 10.1158/0008-5472.CAN-15-2386. Epub 2016 Mar 24.

3.

Divergent clonal selection dominates medulloblastoma at recurrence.

Morrissy AS, Garzia L, Shih DJ, Zuyderduyn S, Huang X, Skowron P, Remke M, Cavalli FM, Ramaswamy V, Lindsay PE, Jelveh S, Donovan LK, Wang X, Luu B, Zayne K, Li Y, Mayoh C, Thiessen N, Mercier E, Mungall KL, Ma Y, Tse K, Zeng T, Shumansky K, Roth AJ, Shah S, Farooq H, Kijima N, Holgado BL, Lee JJ, Matan-Lithwick S, Liu J, Mack SC, Manno A, Michealraj KA, Nor C, Peacock J, Qin L, Reimand J, Rolider A, Thompson YY, Wu X, Pugh T, Ally A, Bilenky M, Butterfield YS, Carlsen R, Cheng Y, Chuah E, Corbett RD, Dhalla N, He A, Lee D, Li HI, Long W, Mayo M, Plettner P, Qian JQ, Schein JE, Tam A, Wong T, Birol I, Zhao Y, Faria CC, Pimentel J, Nunes S, Shalaby T, Grotzer M, Pollack IF, Hamilton RL, Li XN, Bendel AE, Fults DW, Walter AW, Kumabe T, Tominaga T, Collins VP, Cho YJ, Hoffman C, Lyden D, Wisoff JH, Garvin JH Jr, Stearns DS, Massimi L, Schüller U, Sterba J, Zitterbart K, Puget S, Ayrault O, Dunn SE, Tirapelli DP, Carlotti CG, Wheeler H, Hallahan AR, Ingram W, MacDonald TJ, Olson JJ, Van Meir EG, Lee JY, Wang KC, Kim SK, Cho BK, Pietsch T, Fleischhack G, Tippelt S, Ra YS, Bailey S, Lindsey JC, Clifford SC, Eberhart CG, Cooper MK, Packer RJ, Massimino M, Garre ML, Bartels U, Tabori U, Hawkins CE, Dirks P, Bouffet E, Rutka JT, Wechsler-Reya RJ, Weiss WA, Collier LS, Dupuy AJ, Korshunov A, Jones DT, Kool M, Northcott PA, Pfister SM, Largaespada DA, Mungall AJ, Moore RA, Jabado N, Bader GD, Jones SJ, Malkin D, Marra MA, Taylor MD.

Nature. 2016 Jan 21;529(7586):351-7. doi: 10.1038/nature16478. Epub 2016 Jan 13.

4.

Microglial numbers attain adult levels after undergoing a rapid decrease in cell number in the third postnatal week.

Nikodemova M, Kimyon RS, De I, Small AL, Collier LS, Watters JJ.

J Neuroimmunol. 2015 Jan 15;278:280-8. doi: 10.1016/j.jneuroim.2014.11.018. Epub 2014 Nov 24.

5.

Sleeping Beauty mouse models identify candidate genes involved in gliomagenesis.

Vyazunova I, Maklakova VI, Berman S, De I, Steffen MD, Hong W, Lincoln H, Morrissy AS, Taylor MD, Akagi K, Brennan CW, Rodriguez FJ, Collier LS.

PLoS One. 2014 Nov 25;9(11):e113489. doi: 10.1371/journal.pone.0113489. eCollection 2014.

6.

CSF1 overexpression has pleiotropic effects on microglia in vivo.

De I, Nikodemova M, Steffen MD, Sokn E, Maklakova VI, Watters JJ, Collier LS.

Glia. 2014 Dec;62(12):1955-67. doi: 10.1002/glia.22717. Epub 2014 Jul 5.

7.

Rosa26-GFP direct repeat (RaDR-GFP) mice reveal tissue- and age-dependence of homologous recombination in mammals in vivo.

Sukup-Jackson MR, Kiraly O, Kay JE, Na L, Rowland EA, Winther KE, Chow DN, Kimoto T, Matsuguchi T, Jonnalagadda VS, Maklakova VI, Singh VR, Wadduwage DN, Rajapakse J, So PT, Collier LS, Engelward BP.

PLoS Genet. 2014 Jun 5;10(6):e1004299. doi: 10.1371/journal.pgen.1004299. eCollection 2014 Jun.

8.

A dominantly acting murine allele of Mcm4 causes chromosomal abnormalities and promotes tumorigenesis.

Bagley BN, Keane TM, Maklakova VI, Marshall JG, Lester RA, Cancel MM, Paulsen AR, Bendzick LE, Been RA, Kogan SC, Cormier RT, Kendziorski C, Adams DJ, Collier LS.

PLoS Genet. 2012;8(11):e1003034. doi: 10.1371/journal.pgen.1003034. Epub 2012 Nov 1.

9.

The deubiquitinase USP9X suppresses pancreatic ductal adenocarcinoma.

Pérez-Mancera PA, Rust AG, van der Weyden L, Kristiansen G, Li A, Sarver AL, Silverstein KA, Grützmann R, Aust D, Rümmele P, Knösel T, Herd C, Stemple DL, Kettleborough R, Brosnan JA, Li A, Morgan R, Knight S, Yu J, Stegeman S, Collier LS, ten Hoeve JJ, de Ridder J, Klein AP, Goggins M, Hruban RH, Chang DK, Biankin AV, Grimmond SM; Australian Pancreatic Cancer Genome Initiative, Wessels LF, Wood SA, Iacobuzio-Donahue CA, Pilarsky C, Largaespada DA, Adams DJ, Tuveson DA.

Nature. 2012 Apr 29;486(7402):266-70. doi: 10.1038/nature11114. Erratum in: Nature. 2013 Feb 21;494(7437):390. Scarlett, Christopher J [added]; Kaplan, Warren [added]; Scarpa, Aldo [added], Das, Amithabad [corrected to Das, Amitabha].

10.

An insertional mutagenesis screen identifies genes that cooperate with Mll-AF9 in a murine leukemogenesis model.

Bergerson RJ, Collier LS, Sarver AL, Been RA, Lugthart S, Diers MD, Zuber J, Rappaport AR, Nixon MJ, Silverstein KA, Fan D, Lamblin AF, Wolff L, Kersey JH, Delwel R, Lowe SW, O'Sullivan MG, Kogan SC, Adams DJ, Largaespada DA.

Blood. 2012 May 10;119(19):4512-23. doi: 10.1182/blood-2010-04-281428. Epub 2012 Mar 16.

11.

Clonal selection drives genetic divergence of metastatic medulloblastoma.

Wu X, Northcott PA, Dubuc A, Dupuy AJ, Shih DJ, Witt H, Croul S, Bouffet E, Fults DW, Eberhart CG, Garzia L, Van Meter T, Zagzag D, Jabado N, Schwartzentruber J, Majewski J, Scheetz TE, Pfister SM, Korshunov A, Li XN, Scherer SW, Cho YJ, Akagi K, MacDonald TJ, Koster J, McCabe MG, Sarver AL, Collins VP, Weiss WA, Largaespada DA, Collier LS, Taylor MD.

Nature. 2012 Feb 15;482(7386):529-33. doi: 10.1038/nature10825.

12.

Global assessment of experimental climate warming on tundra vegetation: heterogeneity over space and time.

Elmendorf SC, Henry GH, Hollister RD, Björk RG, Bjorkman AD, Callaghan TV, Collier LS, Cooper EJ, Cornelissen JH, Day TA, Fosaa AM, Gould WA, Grétarsdóttir J, Harte J, Hermanutz L, Hik DS, Hofgaard A, Jarrad F, Jónsdóttir IS, Keuper F, Klanderud K, Klein JA, Koh S, Kudo G, Lang SI, Loewen V, May JL, Mercado J, Michelsen A, Molau U, Myers-Smith IH, Oberbauer SF, Pieper S, Post E, Rixen C, Robinson CH, Schmidt NM, Shaver GR, Stenström A, Tolvanen A, Totland O, Troxler T, Wahren CH, Webber PJ, Welker JM, Wookey PA.

Ecol Lett. 2012 Feb;15(2):164-75. doi: 10.1111/j.1461-0248.2011.01716.x. Epub 2011 Dec 5.

PMID:
22136670
13.

Sleeping beauty-mediated somatic mutagenesis implicates CSF1 in the formation of high-grade astrocytomas.

Bender AM, Collier LS, Rodriguez FJ, Tieu C, Larson JD, Halder C, Mahlum E, Kollmeyer TM, Akagi K, Sarkar G, Largaespada DA, Jenkins RB.

Cancer Res. 2010 May 1;70(9):3557-65. doi: 10.1158/0008-5472.CAN-09-4674. Epub 2010 Apr 13.

14.

Novel candidate cancer genes identified by a large-scale cross-species comparative oncogenomics approach.

Mattison J, Kool J, Uren AG, de Ridder J, Wessels L, Jonkers J, Bignell GR, Butler A, Rust AG, Brosch M, Wilson CH, van der Weyden L, Largaespada DA, Stratton MR, Futreal PA, van Lohuizen M, Berns A, Collier LS, Hubbard T, Adams DJ.

Cancer Res. 2010 Feb 1;70(3):883-95. doi: 10.1158/0008-5472.CAN-09-1737. Epub 2010 Jan 26.

15.

Whole-body sleeping beauty mutagenesis can cause penetrant leukemia/lymphoma and rare high-grade glioma without associated embryonic lethality.

Collier LS, Adams DJ, Hackett CS, Bendzick LE, Akagi K, Davies MN, Diers MD, Rodriguez FJ, Bender AM, Tieu C, Matise I, Dupuy AJ, Copeland NG, Jenkins NA, Hodgson JG, Weiss WA, Jenkins RB, Largaespada DA.

Cancer Res. 2009 Nov 1;69(21):8429-37. doi: 10.1158/0008-5472.CAN-09-1760. Epub 2009 Oct 20.

16.

Identification of PDE4D as a proliferation promoting factor in prostate cancer using a Sleeping Beauty transposon-based somatic mutagenesis screen.

Rahrmann EP, Collier LS, Knutson TP, Doyal ME, Kuslak SL, Green LE, Malinowski RL, Roethe L, Akagi K, Waknitz M, Huang W, Largaespada DA, Marker PC.

Cancer Res. 2009 May 15;69(10):4388-97. doi: 10.1158/0008-5472.CAN-08-3901. Epub 2009 Apr 28.

17.

A transposon-based genetic screen in mice identifies genes altered in colorectal cancer.

Starr TK, Allaei R, Silverstein KA, Staggs RA, Sarver AL, Bergemann TL, Gupta M, O'Sullivan MG, Matise I, Dupuy AJ, Collier LS, Powers S, Oberg AL, Asmann YW, Thibodeau SN, Tessarollo L, Copeland NG, Jenkins NA, Cormier RT, Largaespada DA.

Science. 2009 Mar 27;323(5922):1747-50. doi: 10.1126/science.1163040. Epub 2009 Feb 26.

18.

A conditional transposon-based insertional mutagenesis screen for genes associated with mouse hepatocellular carcinoma.

Keng VW, Villanueva A, Chiang DY, Dupuy AJ, Ryan BJ, Matise I, Silverstein KA, Sarver A, Starr TK, Akagi K, Tessarollo L, Collier LS, Powers S, Lowe SW, Jenkins NA, Copeland NG, Llovet JM, Largaespada DA.

Nat Biotechnol. 2009 Mar;27(3):264-74. doi: 10.1038/nbt.1526. Epub 2009 Feb 22.

19.

Transposon-mediated mutagenesis in somatic cells: identification of transposon-genomic DNA junctions.

Largaespada DA, Collier LS.

Methods Mol Biol. 2008;435:95-108. doi: 10.1007/978-1-59745-232-8_7.

20.

Transposable elements and the dynamic somatic genome.

Collier LS, Largaespada DA.

Genome Biol. 2007;8 Suppl 1:S5. Review.

21.

Transposons for cancer gene discovery: Sleeping Beauty and beyond.

Collier LS, Largaespada DA.

Genome Biol. 2007;8 Suppl 1:S15. Review.

22.

Markers of prostate region-specific epithelial identity define anatomical locations in the mouse prostate that are molecularly similar to human prostate cancers.

Thielen JL, Volzing KG, Collier LS, Green LE, Largaespada DA, Marker PC.

Differentiation. 2007 Jan;75(1):49-61.

PMID:
17244021
23.

Gene mutations and genomic rearrangements in the mouse as a result of transposon mobilization from chromosomal concatemers.

Geurts AM, Collier LS, Geurts JL, Oseth LL, Bell ML, Mu D, Lucito R, Godbout SA, Green LE, Lowe SW, Hirsch BA, Leinwand LA, Largaespada DA.

PLoS Genet. 2006 Sep 29;2(9):e156. Epub 2006 Aug 3.

24.

Structure-based prediction of insertion-site preferences of transposons into chromosomes.

Geurts AM, Hackett CS, Bell JB, Bergemann TL, Collier LS, Carlson CM, Largaespada DA, Hackett PB.

Nucleic Acids Res. 2006 May 22;34(9):2803-11. Print 2006.

25.

Transforming science: cancer gene identification.

Collier LS, Largaespada DA.

Curr Opin Genet Dev. 2006 Feb;16(1):23-9. Epub 2005 Dec 1. Review.

PMID:
16326095
26.

Hopping around the tumor genome: transposons for cancer gene discovery.

Collier LS, Largaespada DA.

Cancer Res. 2005 Nov 1;65(21):9607-10. Review.

27.

Cancer gene discovery in solid tumours using transposon-based somatic mutagenesis in the mouse.

Collier LS, Carlson CM, Ravimohan S, Dupuy AJ, Largaespada DA.

Nature. 2005 Jul 14;436(7048):272-6.

28.

Drosophila Costal1 mutations are alleles of protein kinase A that modulate hedgehog signaling.

Collier LS, Suyama K, Anderson JH, Scott MP.

Genetics. 2004 Jun;167(2):783-96.

29.

Synergistic transcriptional activation by one regulatory protein in response to two metabolites.

Bundy BM, Collier LS, Hoover TR, Neidle EL.

Proc Natl Acad Sci U S A. 2002 May 28;99(11):7693-8.

31.

Key aromatic-ring-cleaving enzyme, protocatechuate 3,4-dioxygenase, in the ecologically important marine Roseobacter lineage.

Buchan A, Collier LS, Neidle EL, Moran MA.

Appl Environ Microbiol. 2000 Nov;66(11):4662-72.

32.

Vertebrate homologs of Drosophila suppressor of fused interact with the gli family of transcriptional regulators.

Pearse RV 2nd, Collier LS, Scott MP, Tabin CJ.

Dev Biol. 1999 Aug 15;212(2):323-36.

33.

areABC genes determine the catabolism of aryl esters in Acinetobacter sp. Strain ADP1.

Jones RM, Collier LS, Neidle EL, Williams PA.

J Bacteriol. 1999 Aug;181(15):4568-75.

34.

MP1: a MEK binding partner that enhances enzymatic activation of the MAP kinase cascade.

Schaeffer HJ, Catling AD, Eblen ST, Collier LS, Krauss A, Weber MJ.

Science. 1998 Sep 11;281(5383):1668-71.

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