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Items: 13


Transcriptomic analysis of the oleaginous yeast Lipomyces starkeyi during lipid accumulation on enzymatically treated corn stover hydrolysate.

Pomraning KR, Collett JR, Kim J, Panisko EA, Culley DE, Dai Z, Deng S, Hofstad BA, Butcher MG, Magnuson JK.

Biotechnol Biofuels. 2019 Jun 26;12:162. doi: 10.1186/s13068-019-1510-z. eCollection 2019.


Omics Analyses of Trichoderma reesei CBS999.97 and QM6a Indicate the Relevance of Female Fertility to Carbohydrate-Active Enzyme and Transporter Levels.

Tisch D, Pomraning KR, Collett JR, Freitag M, Baker SE, Chen CL, Hsu PW, Chuang YC, Schuster A, Dattenböck C, Stappler E, Sulyok M, Böhmdorfer S, Oberlerchner J, Wang TF, Schmoll M.

Appl Environ Microbiol. 2017 Oct 31;83(22). pii: e01578-17. doi: 10.1128/AEM.01578-17. Print 2017 Nov 15.


Increased production of fatty acids and triglycerides in Aspergillus oryzae by enhancing expressions of fatty acid synthesis-related genes.

Tamano K, Bruno KS, Karagiosis SA, Culley DE, Deng S, Collett JR, Umemura M, Koike H, Baker SE, Machida M.

Appl Microbiol Biotechnol. 2013 Jan;97(1):269-81. doi: 10.1007/s00253-012-4193-y. Epub 2012 Jun 26.


A versatile toolkit for high throughput functional genomics with Trichoderma reesei.

Schuster A, Bruno KS, Collett JR, Baker SE, Seiboth B, Kubicek CP, Schmoll M.

Biotechnol Biofuels. 2012 Jan 2;5(1):1. doi: 10.1186/1754-6834-5-1.


Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing.

Le Crom S, Schackwitz W, Pennacchio L, Magnuson JK, Culley DE, Collett JR, Martin J, Druzhinina IS, Mathis H, Monot F, Seiboth B, Cherry B, Rey M, Berka R, Kubicek CP, Baker SE, Margeot A.

Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16151-6. doi: 10.1073/pnas.0905848106. Epub 2009 Sep 2.


ProMAT calibrator: A tool for reducing experimental bias in antibody microarrays.

Zangar RC, Daly DS, White AM, Servoss SL, Tan RM, Collett JR.

J Proteome Res. 2009 Aug;8(8):3937-43. doi: 10.1021/pr900247n.


ELISA-BASE: an integrated bioinformatics tool for analyzing and tracking ELISA microarray data.

White AM, Collett JR, Seurynck-Servoss SL, Daly DS, Zangar RC.

Bioinformatics. 2009 Jun 15;25(12):1566-7. doi: 10.1093/bioinformatics/btp182. Epub 2009 Apr 3.


Optimization of aptamer microarray technology for multiple protein targets.

Cho EJ, Collett JR, Szafranska AE, Ellington AD.

Anal Chim Acta. 2006 Mar 30;564(1):82-90. Epub 2006 Jan 23.


Production and processing of aptamer microarrays.

Collett JR, Cho EJ, Ellington AD.

Methods. 2005 Sep;37(1):4-15. Epub 2005 Sep 30. Review.


Functional RNA microarrays for high-throughput screening of antiprotein aptamers.

Collett JR, Cho EJ, Lee JF, Levy M, Hood AJ, Wan C, Ellington AD.

Anal Biochem. 2005 Mar 1;338(1):113-23.


The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs.

Cannone JJ, Subramanian S, Schnare MN, Collett JR, D'Souza LM, Du Y, Feng B, Lin N, Madabusi LV, Müller KM, Pande N, Shang Z, Yu N, Gutell RR.

BMC Bioinformatics. 2002;3:2. Epub 2002 Jan 17. Erratum in: BMC Bioinformatics. 2002 Jul;3(1):15.


Specific elimination of preformed antibody activity against xenogeneic antigens by use of an extracorporeal immunoadsorptive circuit.

Watkins JF, Edwards NM, Sanchez JA, Ott GY, Coppey LJ, Collett JR, He X, McLaughlin M, Berger CL, Smith CR, et al.

Transplant Proc. 1991 Feb;23(1 Pt 1):360-4. No abstract available.


Agricultural use of water.

Collett JR.

Proc R Soc Lond B Biol Sci. 1980 Jul 28;209(1174):31-6.


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