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Items: 36

1.

Developmental and genetic regulation of the human cortex transcriptome illuminate schizophrenia pathogenesis.

Jaffe AE, Straub RE, Shin JH, Tao R, Gao Y, Collado-Torres L, Kam-Thong T, Xi HS, Quan J, Chen Q, Colantuoni C, Ulrich WS, Maher BJ, Deep-Soboslay A; BrainSeq Consortium, Cross AJ, Brandon NJ, Leek JT, Hyde TM, Kleinman JE, Weinberger DR.

Nat Neurosci. 2018 Aug;21(8):1117-1125. doi: 10.1038/s41593-018-0197-y. Epub 2018 Jul 26.

PMID:
30050107
2.

Convergence of placenta biology and genetic risk for schizophrenia.

Ursini G, Punzi G, Chen Q, Marenco S, Robinson JF, Porcelli A, Hamilton EG, Mitjans M, Maddalena G, Begemann M, Seidel J, Yanamori H, Jaffe AE, Berman KF, Egan MF, Straub RE, Colantuoni C, Blasi G, Hashimoto R, Rujescu D, Ehrenreich H, Bertolino A, Weinberger DR.

Nat Med. 2018 Jun;24(6):792-801. doi: 10.1038/s41591-018-0021-y. Epub 2018 May 28.

PMID:
29808008
3.

PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF.

Stein-O'Brien GL, Carey JL, Lee WS, Considine M, Favorov AV, Flam E, Guo T, Li S, Marchionni L, Sherman T, Sivy S, Gaykalova DA, McKay RD, Ochs MF, Colantuoni C, Fertig EJ.

Bioinformatics. 2017 Jun 15;33(12):1892-1894. doi: 10.1093/bioinformatics/btx058.

4.

Molecular signatures associated with cognitive deficits in schizophrenia: a study of biopsied olfactory neural epithelium.

Horiuchi Y, Kondo MA, Okada K, Takayanagi Y, Tanaka T, Ho T, Varvaris M, Tajinda K, Hiyama H, Ni K, Colantuoni C, Schretlen D, Cascella NG, Pevsner J, Ishizuka K, Sawa A.

Transl Psychiatry. 2016 Oct 11;6(10):e915. doi: 10.1038/tp.2016.154.

5.

Erratum to: Practical impacts of genomic data "cleaning" on biological discovery using surrogate variable analysis.

Jaffe AE, Hyde T, Kleinman J, Weinberger DR, Chenoweth JG, McKay RD, Leek JT, Colantuoni C.

BMC Bioinformatics. 2016 Aug 10;17:302. doi: 10.1186/s12859-016-1152-0. No abstract available.

6.

Practical impacts of genomic data "cleaning" on biological discovery using surrogate variable analysis.

Jaffe AE, Hyde T, Kleinman J, Weinbergern DR, Chenoweth JG, McKay RD, Leek JT, Colantuoni C.

BMC Bioinformatics. 2015 Nov 6;16:372. doi: 10.1186/s12859-015-0808-5. Erratum in: BMC Bioinformatics. 2016;17:302.

7.

Concise Review: Reprogramming, Behind the Scenes: Noncanonical Neural Stem Cell Signaling Pathways Reveal New, Unseen Regulators of Tissue Plasticity With Therapeutic Implications.

Poser SW, Chenoweth JG, Colantuoni C, Masjkur J, Chrousos G, Bornstein SR, McKay RD, Androutsellis-Theotokis A.

Stem Cells Transl Med. 2015 Nov;4(11):1251-7. doi: 10.5966/sctm.2015-0105. Epub 2015 Sep 14. Review.

8.

Phosphorylation of TET proteins is regulated via O-GlcNAcylation by the O-linked N-acetylglucosamine transferase (OGT).

Bauer C, Göbel K, Nagaraj N, Colantuoni C, Wang M, Müller U, Kremmer E, Rottach A, Leonhardt H.

J Biol Chem. 2015 Feb 20;290(8):4801-12. doi: 10.1074/jbc.M114.605881. Epub 2015 Jan 7.

9.

Behaviorally activated mRNA expression profiles produce signatures of learning and enhanced inhibition in aged rats with preserved memory.

Haberman RP, Colantuoni C, Koh MT, Gallagher M.

PLoS One. 2013 Dec 13;8(12):e83674. doi: 10.1371/journal.pone.0083674. eCollection 2013.

10.

Pattern identification in time-course gene expression data with the CoGAPS matrix factorization.

Fertig EJ, Stein-O'Brien G, Jaffe A, Colantuoni C.

Methods Mol Biol. 2014;1101:87-112. doi: 10.1007/978-1-62703-721-1_6.

PMID:
24233779
11.

Olfactory cells via nasal biopsy reflect the developing brain in gene expression profiles: utility and limitation of the surrogate tissues in research for brain disorders.

Horiuchi Y, Kano S, Ishizuka K, Cascella NG, Ishii S, Talbot CC Jr, Jaffe AE, Okano H, Pevsner J, Colantuoni C, Sawa A.

Neurosci Res. 2013 Dec;77(4):247-50. doi: 10.1016/j.neures.2013.09.010. Epub 2013 Oct 11.

12.

Unique pharmacological actions of atypical neuroleptic quetiapine: possible role in cell cycle/fate control.

Kondo MA, Tajinda K, Colantuoni C, Hiyama H, Seshadri S, Huang B, Pou S, Furukori K, Hookway C, Jaaro-Peled H, Kano SI, Matsuoka N, Harada K, Ni K, Pevsner J, Sawa A.

Transl Psychiatry. 2013 Apr 2;3:e243. doi: 10.1038/tp.2013.19.

13.

MicroRNA-382 expression is elevated in the olfactory neuroepithelium of schizophrenia patients.

Mor E, Kano S, Colantuoni C, Sawa A, Navon R, Shomron N.

Neurobiol Dis. 2013 Jul;55:1-10. doi: 10.1016/j.nbd.2013.03.011. Epub 2013 Mar 29.

14.

Genome-wide profiling of multiple histone methylations in olfactory cells: further implications for cellular susceptibility to oxidative stress in schizophrenia.

Kano S, Colantuoni C, Han F, Zhou Z, Yuan Q, Wilson A, Takayanagi Y, Lee Y, Rapoport J, Eaton W, Cascella N, Ji H, Goldman D, Sawa A.

Mol Psychiatry. 2013 Jul;18(7):740-2. doi: 10.1038/mp.2012.120. Epub 2012 Aug 28. No abstract available.

15.

DNA methylation signatures in development and aging of the human prefrontal cortex.

Numata S, Ye T, Hyde TM, Guitart-Navarro X, Tao R, Wininger M, Colantuoni C, Weinberger DR, Kleinman JE, Lipska BK.

Am J Hum Genet. 2012 Feb 10;90(2):260-72. doi: 10.1016/j.ajhg.2011.12.020. Epub 2012 Feb 2. Erratum in: Am J Hum Genet. 2012 Oct 5;91(4):765.

16.

Temporal dynamics and genetic control of transcription in the human prefrontal cortex.

Colantuoni C, Lipska BK, Ye T, Hyde TM, Tao R, Leek JT, Colantuoni EA, Elkahloun AG, Herman MM, Weinberger DR, Kleinman JE.

Nature. 2011 Oct 26;478(7370):519-23. doi: 10.1038/nature10524.

17.

Expression of GABA signaling molecules KCC2, NKCC1, and GAD1 in cortical development and schizophrenia.

Hyde TM, Lipska BK, Ali T, Mathew SV, Law AJ, Metitiri OE, Straub RE, Ye T, Colantuoni C, Herman MM, Bigelow LB, Weinberger DR, Kleinman JE.

J Neurosci. 2011 Jul 27;31(30):11088-95. doi: 10.1523/JNEUROSCI.1234-11.2011.

18.

Reciprocal regulation of metabolic and signaling pathways.

Barth AS, Kumordzie A, Colantuoni C, Margulies KB, Cappola TP, Tomaselli GF.

BMC Genomics. 2010 Mar 24;11:197. doi: 10.1186/1471-2164-11-197.

19.

Neuronal biomarkers from patients with mental illnesses: a novel method through nasal biopsy combined with laser-captured microdissection.

Tajinda K, Ishizuka K, Colantuoni C, Morita M, Winicki J, Le C, Lin S, Schretlen D, Sawa A, Cascella NG.

Mol Psychiatry. 2010 Mar;15(3):231-2. doi: 10.1038/mp.2009.73. No abstract available.

PMID:
20168323
20.

Cardiac resynchronization therapy corrects dyssynchrony-induced regional gene expression changes on a genomic level.

Barth AS, Aiba T, Halperin V, DiSilvestre D, Chakir K, Colantuoni C, Tunin RS, Dimaano VL, Yu W, Abraham TP, Kass DA, Tomaselli GF.

Circ Cardiovasc Genet. 2009 Aug;2(4):371-8. doi: 10.1161/CIRCGENETICS.108.832345. Epub 2009 May 15.

21.

Prominent hippocampal CA3 gene expression profile in neurocognitive aging.

Haberman RP, Colantuoni C, Stocker AM, Schmidt AC, Pedersen JT, Gallagher M.

Neurobiol Aging. 2011 Sep;32(9):1678-92. doi: 10.1016/j.neurobiolaging.2009.10.005. Epub 2009 Nov 13.

22.

Negative symptoms of schizophrenia correlate with impairment on the University of Pennsylvania smell identification test.

Ishizuka K, Tajinda K, Colantuoni C, Morita M, Winicki J, Le C, Lin S, Schretlen D, Sawa A, Cascella NG.

Neurosci Res. 2010 Jan;66(1):106-10. doi: 10.1016/j.neures.2009.10.001. Epub 2009 Oct 9.

23.

Rapid encoding of new information alters the profile of plasticity-related mRNA transcripts in the hippocampal CA3 region.

Haberman RP, Lee HJ, Colantuoni C, Koh MT, Gallagher M.

Proc Natl Acad Sci U S A. 2008 Jul 29;105(30):10601-6. doi: 10.1073/pnas.0804292105. Epub 2008 Jul 23.

24.

Age-related changes in the expression of schizophrenia susceptibility genes in the human prefrontal cortex.

Colantuoni C, Hyde TM, Mitkus S, Joseph A, Sartorius L, Aguirre C, Creswell J, Johnson E, Deep-Soboslay A, Herman MM, Lipska BK, Weinberger DR, Kleinman JE.

Brain Struct Funct. 2008 Sep;213(1-2):255-71. doi: 10.1007/s00429-008-0181-5. Epub 2008 May 10. Erratum in: Brain Struct Funct. 2008 Sep;213(1-2):273.

PMID:
18470533
25.

Mycobacterium tuberculosis SigF regulates genes encoding cell wall-associated proteins and directly regulates the transcriptional regulatory gene phoY1.

Williams EP, Lee JH, Bishai WR, Colantuoni C, Karakousis PC.

J Bacteriol. 2007 Jun;189(11):4234-42. Epub 2007 Mar 23.

26.

Transcriptional changes common to human cocaine, cannabis and phencyclidine abuse.

Lehrmann E, Colantuoni C, Deep-Soboslay A, Becker KG, Lowe R, Huestis MA, Hyde TM, Kleinman JE, Freed WJ.

PLoS One. 2006 Dec 27;1:e114.

27.

Individual differences in neurocognitive aging of the medial temporal lobe.

Gallagher M, Colantuoni C, Eichenbaum H, Haberman RP, Rapp PR, Tanila H, Wilson IA.

Age (Dordr). 2006 Sep;28(3):221-33. doi: 10.1007/s11357-006-9017-5. Epub 2006 Nov 25.

28.

Regional mu-opioid receptor binding in insular cortex is decreased in bulimia nervosa and correlates inversely with fasting behavior.

Bencherif B, Guarda AS, Colantuoni C, Ravert HT, Dannals RF, Frost JJ.

J Nucl Med. 2005 Aug;46(8):1349-51.

29.

Regulation of c-Met-dependent gene expression by PTEN.

Abounader R, Reznik T, Colantuoni C, Martinez-Murillo F, Rosen EM, Laterra J.

Oncogene. 2004 Dec 9;23(57):9173-82.

PMID:
15516982
30.

SNOMAD (Standardization and NOrmalization of MicroArray Data): web-accessible gene expression data analysis.

Colantuoni C, Henry G, Zeger S, Pevsner J.

Bioinformatics. 2002 Nov;18(11):1540-1.

PMID:
12424128
31.
32.

Evidence that intermittent, excessive sugar intake causes endogenous opioid dependence.

Colantuoni C, Rada P, McCarthy J, Patten C, Avena NM, Chadeayne A, Hoebel BG.

Obes Res. 2002 Jun;10(6):478-88.

33.

Excessive sugar intake alters binding to dopamine and mu-opioid receptors in the brain.

Colantuoni C, Schwenker J, McCarthy J, Rada P, Ladenheim B, Cadet JL, Schwartz GJ, Moran TH, Hoebel BG.

Neuroreport. 2001 Nov 16;12(16):3549-52.

PMID:
11733709
34.

Gene expression profiling in postmortem Rett Syndrome brain: differential gene expression and patient classification.

Colantuoni C, Jeon OH, Hyder K, Chenchik A, Khimani AH, Narayanan V, Hoffman EP, Kaufmann WE, Naidu S, Pevsner J.

Neurobiol Dis. 2001 Oct;8(5):847-65.

PMID:
11592853
35.

High throughput analysis of gene expression in the human brain.

Colantuoni C, Purcell AE, Bouton CM, Pevsner J.

J Neurosci Res. 2000 Jan 1;59(1):1-10. Review.

PMID:
10658179
36.

Acetaldehyde-induced changes in monoamine and amino acid extracellular microdialysate content of the nucleus accumbens.

Ward RJ, Colantuoni C, Dahchour A, Quertemont E, De Witte P.

Neuropharmacology. 1997 Feb;36(2):225-32.

PMID:
9144660

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