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Items: 1 to 50 of 145

1.

Biochemical characterization of a novel thermostable feruloyl esterase from Geobacillus thermoglucosidasius DSM 2542T.

Ay Sal F, Colak DN, Guler HI, Canakci S, Belduz AO.

Mol Biol Rep. 2019 Jun 14. doi: 10.1007/s11033-019-04893-6. [Epub ahead of print]

PMID:
31201678
2.

First report of two successive deletions on chromosome 15q13 cytogenetic bands in a boy and girl: additional data to 15q13.3 syndrome with a report of high IQ patient.

Alsagob M, Salih MA, Hamad MHA, Al-Yafee Y, Al-Zahrani J, Al-Bakheet A, Nester M, Sakati N, Wakil SM, AlOdaib A, Colak D, Kaya N.

Mol Cytogenet. 2019 May 18;12:21. doi: 10.1186/s13039-019-0432-6. eCollection 2019.

3.

Biomolecular Databases and Subnetwork Identification Approaches of Interest to Big Data Community: An Expert Review.

Al-Harazi O, El Allali A, Colak D.

OMICS. 2019 Mar;23(3):138-151. doi: 10.1089/omi.2018.0205.

PMID:
30883301
4.

β1 Integrin is essential for fascin-mediated breast cancer stem cell function and disease progression.

Barnawi R, Al-Khaldi S, Colak D, Tulbah A, Al-Tweigeri T, Fallatah M, Monies D, Ghebeh H, Al-Alwan M.

Int J Cancer. 2019 Aug 1;145(3):830-841. doi: 10.1002/ijc.32183. Epub 2019 Feb 18.

PMID:
30719702
5.

Bi-allelic TMEM94 Truncating Variants Are Associated with Neurodevelopmental Delay, Congenital Heart Defects, and Distinct Facial Dysmorphism.

Stephen J, Maddirevula S, Nampoothiri S, Burke JD, Herzog M, Shukla A, Steindl K, Eskin A, Patil SJ, Joset P, Lee H, Garrett LJ, Yokoyama T, Balanda N, Bodine SP, Tolman NJ, Zerfas PM, Zheng A, Ramantani G, Girisha KM, Rivas C, Suresh PV, Elkahloun A, Alsaif HS, Wakil SM, Mahmoud L, Ali R, Prochazkova M; Undiagnosed Diseases Network members, Kulkarni AB, Ben-Omran T, Colak D, Morris HD, Rauch A, Martinez-Agosto JA, Nelson SF, Alkuraya FS, Gahl WA, Malicdan MCV.

Am J Hum Genet. 2018 Dec 6;103(6):948-967. doi: 10.1016/j.ajhg.2018.11.001.

6.

Cloning, characterization and paper pulp applications of a newly isolated DyP type peroxidase from Rhodococcus sp. T1.

Sahinkaya M, Colak DN, Ozer A, Canakci S, Deniz I, Belduz AO.

Mol Biol Rep. 2019 Feb;46(1):569-580. doi: 10.1007/s11033-018-4509-9. Epub 2018 Nov 24.

PMID:
30474775
7.

Deletion and Functional Analysis of Hepatitis B Virus X Protein: Evidence for an Effect on Cell Cycle Regulators.

Al-Anazi MR, Nazir N, Colak D, Al-Ahdal MN, Al-Qahtani AA.

Cell Physiol Biochem. 2018;49(5):1987-1998. doi: 10.1159/000493670. Epub 2018 Sep 20.

8.

Evaluation of Samples with DFS Staining Pattern Detected by Indirect Immunofluorescence Assay.

Togay A, Mutlu E, Ongut G, Mutlu D, Colak D, Gultekin M.

Clin Lab. 2018 Mar 1;64(3):393-397. doi: 10.7754/Clin.Lab.2017.170808.

PMID:
29739116
9.

Identification of novel genomic imbalances in Saudi patients with congenital heart disease.

Al-Hassnan ZN, Albawardi W, Almutairi F, AlMass R, AlBakheet A, Mustafa OM, AlQuait L, Shinwari ZMA, Wakil S, Salih MA, Al-Fayyadh M, Hassan SM, Aljoufan M, Al-Nakhli O, Levy B, AlMaarik B, Al-Hakami HA, Alsagob M, Colak D, Kaya N.

Mol Cytogenet. 2018 Jan 25;11:9. doi: 10.1186/s13039-018-0356-6. eCollection 2018.

10.

High prevalence of deleterious BRCA1 and BRCA2 germline mutations in arab breast and ovarian cancer patients.

Alhuqail AJ, Alzahrani A, Almubarak H, Al-Qadheeb S, Alghofaili L, Almoghrabi N, Alhussaini H, Park BH, Colak D, Karakas B.

Breast Cancer Res Treat. 2018 Apr;168(3):695-702. doi: 10.1007/s10549-017-4635-4. Epub 2018 Jan 2.

PMID:
29297111
11.

A Novel Homozygous Mutation in SPTBN2 Leads to Spinocerebellar Ataxia in a Consanguineous Family: Report of a New Infantile-Onset Case and Brief Review of the Literature.

Al-Muhaizea MA, AlMutairi F, Almass R, AlHarthi S, Aldosary MS, Alsagob M, AlOdaib A, Colak D, Kaya N.

Cerebellum. 2018 Jun;17(3):276-285. doi: 10.1007/s12311-017-0893-2.

PMID:
29196973
12.

PD-L1 promotes OCT4 and Nanog expression in breast cancer stem cells by sustaining PI3K/AKT pathway activation.

Almozyan S, Colak D, Mansour F, Alaiya A, Al-Harazi O, Qattan A, Al-Mohanna F, Al-Alwan M, Ghebeh H.

Int J Cancer. 2017 Oct 1;141(7):1402-1412. doi: 10.1002/ijc.30834. Epub 2017 Jun 30.

13.

Protective effects of coenzyme Q10 and resveratrol on oxidative stress induced by various dioxins on transheterozigot larvae of Drosophila melanogaster.

Çolak DA, Uysal H.

Toxicol Res (Camb). 2017 May 8;6(4):521-525. doi: 10.1039/c7tx00027h. eCollection 2017 Jul 1.

14.

GZF1 Mutations Expand the Genetic Heterogeneity of Larsen Syndrome.

Patel N, Shamseldin HE, Sakati N, Khan AO, Softa A, Al-Fadhli FM, Hashem M, Abdulwahab FM, Alshidi T, Alomar R, Alobeid E, Wakil SM, Colak D, Alkuraya FS.

Am J Hum Genet. 2017 May 4;100(5):831-836. doi: 10.1016/j.ajhg.2017.04.008.

15.

The Phenotype and Outcome of Infantile Cardiomyopathy Caused by a Homozygous ELAC2 Mutation.

Shinwari ZMA, Almesned A, Alakhfash A, Al-Rashdan AM, Faqeih E, Al-Humaidi Z, Alomrani A, Alghamdi M, Colak D, Alwadai A, Rababh M, Al-Fayyadh M, Al-Hassnan ZN.

Cardiology. 2017;137(3):188-192. doi: 10.1159/000465516. Epub 2017 Apr 26.

PMID:
28441660
16.

Evaluation of MALDI-TOF-MS for the Identification of Yeast Isolates Causing Bloodstream Infection.

Turhan O, Ozhak-Baysan B, Zaragoza O, Er H, Sarıtas ZE, Ongut G, Ogunc D, Colak D, Cuenca-Estrella M.

Clin Lab. 2017 Apr 1;63(4):699-703. doi: 10.7754/Clin.Lab.2016.161101.

PMID:
28397475
17.

Matrix-Assisted Laser Desorption-Ionization Time-of-Flight Mass Spectrometry (MALDI- TOF MS) for Early Identification of Septic Patients.

Sekercioglu AO, Cekin Y, Ogunc D, Ongut G, Baysan BO, Colak D, Gunseren F, Donmez L.

Clin Lab. 2017 Apr 1;63(4):839-844. doi: 10.7754/Clin.Lab.2016.160907.

PMID:
28397470
18.

Polysorbate 20 increases oral absorption of digoxin in wild-type Sprague Dawley rats, but not in mdr1a(-/-) Sprague Dawley rats.

Nielsen CU, Abdulhussein AA, Colak D, Holm R.

Int J Pharm. 2016 Nov 20;513(1-2):78-87. doi: 10.1016/j.ijpharm.2016.09.011. Epub 2016 Sep 4.

PMID:
27601334
19.

Polypeptide with electroactive endgroups as sensing platform for the abused drug 'methamphetamine' by bioelectrochemical method.

Demir B, Yilmaz T, Guler E, Gumus ZP, Akbulut H, Aldemir E, Coskunol H, Colak DG, Cianga I, Yamada S, Timur S, Endo T, Yagci Y.

Talanta. 2016 Dec 1;161:789-796. doi: 10.1016/j.talanta.2016.09.042. Epub 2016 Sep 17.

PMID:
27769482
20.

Integrated Left Ventricular Global Transcriptome and Proteome Profiling in Human End-Stage Dilated Cardiomyopathy.

Colak D, Alaiya AA, Kaya N, Muiya NP, AlHarazi O, Shinwari Z, Andres E, Dzimiri N.

PLoS One. 2016 Oct 6;11(10):e0162669. doi: 10.1371/journal.pone.0162669. eCollection 2016.

21.

KCNA4 deficiency leads to a syndrome of abnormal striatum, congenital cataract and intellectual disability.

Kaya N, Alsagob M, D'Adamo MC, Al-Bakheet A, Hasan S, Muccioli M, Almutairi FB, Almass R, Aldosary M, Monies D, Mustafa OM, Alyounes B, Kenana R, Al-Zahrani J, Naim E, Binhumaid FS, Qari A, Almutairi F, Meyer B, Plageman TF, Pessia M, Colak D, Al-Owain M.

J Med Genet. 2016 Nov;53(11):786-792. doi: 10.1136/jmedgenet-2015-103637. Epub 2016 Aug 31.

PMID:
27582084
22.

Rare Variants of Carotid-Vertebrobasilar Anastomoses.

Petik B, Colak D, Sirik M, Erturk SM.

J Belg Soc Radiol. 2016 Aug 31;100(1):74. doi: 10.5334/jbr-btr.1167.

23.

Generation of acid mine drainage around the Karaerik copper mine (Espiye, Giresun, NE Turkey): implications from the bacterial population in the Acısu effluent.

Sağlam ES, Akçay M, Çolak DN, İnan Bektaş K, Beldüz AO.

Extremophiles. 2016 Sep;20(5):673-85. doi: 10.1007/s00792-016-0857-3. Epub 2016 Jun 23.

PMID:
27338270
24.

Integrated Genomic and Network-Based Analyses of Complex Diseases and Human Disease Network.

Al-Harazi O, Al Insaif S, Al-Ajlan MA, Kaya N, Dzimiri N, Colak D.

J Genet Genomics. 2016 Jun 20;43(6):349-67. doi: 10.1016/j.jgg.2015.11.002. Epub 2015 Dec 15. Review.

PMID:
27318646
25.

[Monitoring of cytomegalovirus-specific CD4+ and CD8+ T cell responses by cytokine flow cytometry in renal transplant recipients].

Kılınçkaya Doğan H, Mutlu E, Köksoy S, Yılmaz VT, Koçak H, Çolak D, Mutlu D, Günseren F, Dinçkan A, Aliosmanoğlu İ, Süleymanlar G, Gültekin M.

Mikrobiyol Bul. 2016 Apr;50(2):224-35. Turkish.

26.

[Determination of cytomegalovirus glycoprotein B genotypes in different geographical regions and different patient groups in Turkey].

Eren Dağlar D, Öngüt G, Çolak D, Özkul A, Mutlu D, Zeytinoğlu A, Midilli K, Gökahmetoğlu S, Günseren F, Öğünç D, Gültekin M.

Mikrobiyol Bul. 2016 Jan;50(1):53-62. Turkish.

27.

Mutations in SMG9, Encoding an Essential Component of Nonsense-Mediated Decay Machinery, Cause a Multiple Congenital Anomaly Syndrome in Humans and Mice.

Shaheen R, Anazi S, Ben-Omran T, Seidahmed MZ, Caddle LB, Palmer K, Ali R, Alshidi T, Hagos S, Goodwin L, Hashem M, Wakil SM, Abouelhoda M, Colak D, Murray SA, Alkuraya FS.

Am J Hum Genet. 2016 Apr 7;98(4):643-52. doi: 10.1016/j.ajhg.2016.02.010. Epub 2016 Mar 24.

28.

Atypical Feeding and Drainage of Dural AV Fistula.

Sirik M, Petik B, Colak D, Erturk SM, Karatas M.

J Belg Soc Radiol. 2016 Mar 7;100(1):45. doi: 10.5334/jbr-btr.815.

29.

Sulfonamide inhibition studies of the β-carbonic anhydrase from the newly discovered bacterium Enterobacter sp. B13.

Eminoğlu A, Vullo D, Aşık A, Çolak DN, Çanakçı S, Beldüz AO, Supuran CT.

Bioorg Med Chem Lett. 2016 Apr 1;26(7):1821-6. doi: 10.1016/j.bmcl.2016.02.032. Epub 2016 Feb 16.

PMID:
26920803
30.

Disappearing Inferior Vena Cava in A Pediatric Patient with Down Syndrome and Hereditary Thrombophilia.

Petik B, Cevik MO, Sirik M, Colak D, Erturk SM.

J Belg Soc Radiol. 2016 Feb 8;100(1):22. doi: 10.5334/jbr-btr.975.

31.

Treatment of retinitis pigmentosa due to MERTK mutations by ocular subretinal injection of adeno-associated virus gene vector: results of a phase I trial.

Ghazi NG, Abboud EB, Nowilaty SR, Alkuraya H, Alhommadi A, Cai H, Hou R, Deng WT, Boye SL, Almaghamsi A, Al Saikhan F, Al-Dhibi H, Birch D, Chung C, Colak D, LaVail MM, Vollrath D, Erger K, Wang W, Conlon T, Zhang K, Hauswirth W, Alkuraya FS.

Hum Genet. 2016 Mar;135(3):327-43. doi: 10.1007/s00439-016-1637-y. Epub 2016 Jan 29.

PMID:
26825853
32.

A substitution mutation in cardiac ubiquitin ligase, FBXO32, is associated with an autosomal recessive form of dilated cardiomyopathy.

Al-Hassnan ZN, Shinwari ZM, Wakil SM, Tulbah S, Mohammed S, Rahbeeni Z, Alghamdi M, Rababh M, Colak D, Kaya N, Al-Fayyadh M, Alburaiki J.

BMC Med Genet. 2016 Jan 14;17:3. doi: 10.1186/s12881-016-0267-5.

33.

Treatment of Lymph Node-Negative, Early-Stage HER2-Positive Breast Cancer.

Oguz A, Keskin GS, Colak D, Altundag O, Akcali Z.

J Clin Oncol. 2016 Feb 20;34(6):639-40. doi: 10.1200/JCO.2015.63.8411. Epub 2015 Dec 7. No abstract available.

PMID:
26644534
34.

Cloning, expression and biochemical characterization of a β-carbonic anhydrase from the soil bacterium Enterobacter sp. B13.

Eminoğlu A, Vullo D, Aşık A, Çolak DN, Supuran CT, Çanakçı S, Osman Beldüz A.

J Enzyme Inhib Med Chem. 2016 Dec;31(6):1111-8. doi: 10.3109/14756366.2015.1100176. Epub 2015 Oct 26.

PMID:
26497870
35.

Bidirectional crosstalk between PD-L1 expression and epithelial to mesenchymal transition: significance in claudin-low breast cancer cells.

Alsuliman A, Colak D, Al-Harazi O, Fitwi H, Tulbah A, Al-Tweigeri T, Al-Alwan M, Ghebeh H.

Mol Cancer. 2015 Aug 7;14:149. doi: 10.1186/s12943-015-0421-2.

36.

Deletion of low molecular weight protein tyrosine phosphatase (Acp1) protects against stress-induced cardiomyopathy.

Wade F, Quijada P, Al-Haffar KM, Awad SM, Kunhi M, Toko H, Marashly Q, Belhaj K, Zahid I, Al-Mohanna F, Stanford SM, Alvarez R, Liu Y, Colak D, Jordan MC, Roos KP, Assiri A, Al-Habeeb W, Sussman M, Bottini N, Poizat C.

J Pathol. 2015 Dec;237(4):482-94. doi: 10.1002/path.4594. Epub 2015 Sep 1.

37.
39.

Prognostic factors for gemcitabine-refractory patients with advanced pancreatic cancer: a retrospective analysis of a multicentre study (Anatolian Society of Medical Oncology).

İnal A, Kos FT, Algın E, Yıldız R, Berk V, Unek İT, Colak D, Dane F, Geredeli C, Isıkdogan A.

Contemp Oncol (Pozn). 2015;19(2):125-9. doi: 10.5114/wo.2014.43933. Epub 2015 May 13.

40.

Bioimpedance spectroscopy for the differential diagnosis of hyponatremia.

Kose SB, Hur E, Magden K, Yildiz G, Colak D, Kucuk E, Toka B, Kucuk H, Yildirim I, Kokturk F, Duman S.

Ren Fail. 2015 Jul;37(6):947-50. doi: 10.3109/0886022X.2015.1040418. Epub 2015 Apr 27.

PMID:
25915455
41.

Coupled local translation and degradation regulate growth cone collapse.

Deglincerti A, Liu Y, Colak D, Hengst U, Xu G, Jaffrey SR.

Nat Commun. 2015 Apr 22;6:6888. doi: 10.1038/ncomms7888.

42.

Comparison of selective and enrichment media for isolation of vancomycin-resistant enterococci from rectal swab specimens.

Ongut G, Ozyurt OK, Baysan BO, Daglar D, Ogunc D, Inan D, Colak D, Senol YY, Gunseren F.

Indian J Med Microbiol. 2015 Apr-Jun;33(2):320-1. doi: 10.4103/0255-0857.154897. No abstract available.

43.

A novel APC mutation defines a second locus for Cenani-Lenz syndrome.

Patel N, Faqeih E, Anazi S, Alfawareh M, Wakil SM, Colak D, Alkuraya FS.

J Med Genet. 2015 May;52(5):317-21. doi: 10.1136/jmedgenet-2014-102850. Epub 2015 Feb 12.

PMID:
25676610
44.

ISCA2 mutation causes infantile neurodegenerative mitochondrial disorder.

Al-Hassnan ZN, Al-Dosary M, Alfadhel M, Faqeih EA, Alsagob M, Kenana R, Almass R, Al-Harazi OS, Al-Hindi H, Malibari OI, Almutari FB, Tulbah S, Alhadeq F, Al-Sheddi T, Alamro R, AlAsmari A, Almuntashri M, Alshaalan H, Al-Mohanna FA, Colak D, Kaya N.

J Med Genet. 2015 Mar;52(3):186-94. doi: 10.1136/jmedgenet-2014-102592. Epub 2014 Dec 24.

PMID:
25539947
45.

Epidemiology of pertussis in adolescents and adults in Turkey.

Karagul A, Ogunc D, Midilli K, Ongut G, Ozhak Baysan B, Donmez L, Daglar D, Kuskucu MA, Bingol A, Ozbudak O, Colak D, Gunseren F.

Epidemiol Infect. 2015 Sep;143(12):2613-8. doi: 10.1017/S0950268814003483. Epub 2014 Dec 19.

PMID:
25524454
46.

Investigational tests and treatments performed in terminal stage cancer patients in two weeks before death: Turkish oncology group (TOG) study.

Türker İ, Kömürcü Ş, Arıcan A, Doruk H, Özyılkan Ö, Coşkun HŞ, Colak D, Üçgül Çavuşoğlu E, Ata A, Sezer A, Yeşil Çınkır H, Şenler FC, Arpacı F.

Med Oncol. 2014 Dec;31(12):350. doi: 10.1007/s12032-014-0350-8. Epub 2014 Nov 21.

PMID:
25412940
47.

Evaluation of a chromogenic medium for detection of extended-spectrum-beta-lactamase-producing Escherichia coli and Klebsiella pneumoniae strains.

Ongut G, Daloglu AE, Baysan BO, Daglar D, Ogunc D, Sekercioglu AO, Colak D, Gunseren F.

Clin Lab. 2014;60(7):1213-5.

PMID:
25134392
48.

Evaluation of maternal and embryotoxic effects following the treatment of chloral hydrate in Drosophila melanogaster.

Ayar A, Çolak DA, Uysal H.

Cytotechnology. 2016 Mar;68(2):261-6. doi: 10.1007/s10616-014-9776-2. Epub 2014 Aug 7.

49.

[Distribution of hepatitis C virus genotypes among patients with chronic hepatitis C infection in Akdeniz University Hospital, Antalya, Turkey: a five-year evaluation].

Sağlik İ, Mutlu D, Öngut G, İnan D, Öğünç D, Can Sarinoğlu R, Özhak Baysan B, Gültekin M, Çolak D.

Mikrobiyol Bul. 2014 Jul;48(3):429-37. Turkish.

50.

Recurrence risk and prognostic parameters in stage I rectal cancers.

Cihan S, Kucukoner M, Ozdemir N, Dane F, Sendur MA, Yazilitas D, Urakci Z, Durnali A, Yuksel S, Aksoy S, Colak D, Seker MM, Taskoylu BY, Oguz A, Isikdogan A, Zengin N.

Asian Pac J Cancer Prev. 2014;15(13):5337-41.

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