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Items: 36

1.

Transforming the development and dissemination of cutting-edge microscopy and computation.

Colón-Ramos DA, La Riviere P, Shroff H, Oldenbourg R.

Nat Methods. 2019 Aug;16(8):667-669. doi: 10.1038/s41592-019-0475-y. No abstract available.

PMID:
31363203
2.

A specific ATG-4 isoform is required for autophagic maturation and clearance in C. elegans neurons.

Hill SE, Colón-Ramos DA.

Autophagy. 2019 Oct;15(10):1840-1842. doi: 10.1080/15548627.2019.1632123. Epub 2019 Jul 10. No abstract available.

3.

Isotropic Light-Sheet Microscopy and Automated Cell Lineage Analyses to Catalogue Caenorhabditis elegans Embryogenesis with Subcellular Resolution.

Duncan LH, Moyle MW, Shao L, Sengupta T, Ikegami R, Kumar A, Guo M, Christensen R, Santella A, Bao Z, Shroff H, Mohler W, Colón-Ramos DA.

J Vis Exp. 2019 Jun 6;(148). doi: 10.3791/59533.

PMID:
31233035
4.

Maturation and Clearance of Autophagosomes in Neurons Depends on a Specific Cysteine Protease Isoform, ATG-4.2.

Hill SE, Kauffman KJ, Krout M, Richmond JE, Melia TJ, Colón-Ramos DA.

Dev Cell. 2019 Apr 22;49(2):251-266.e8. doi: 10.1016/j.devcel.2019.02.013. Epub 2019 Mar 14.

PMID:
30880001
5.

Statements of Mentorship.

Colón-Ramos DA.

eNeuro. 2018 Dec 14;5(6). pii: ENEURO.0411-18.2018. doi: 10.1523/ENEURO.0411-18.2018. eCollection 2018 Nov-Dec. No abstract available.

6.

ASICs Mediate Food Responses in an Enteric Serotonergic Neuron that Controls Foraging Behaviors.

Rhoades JL, Nelson JC, Nwabudike I, Yu SK, McLachlan IG, Madan GK, Abebe E, Powers JR, Colón-Ramos DA, Flavell SW.

Cell. 2019 Jan 10;176(1-2):85-97.e14. doi: 10.1016/j.cell.2018.11.023. Epub 2018 Dec 20.

PMID:
30580965
7.

Integration of Plasticity Mechanisms within a Single Sensory Neuron of C. elegans Actuates a Memory.

Hawk JD, Calvo AC, Liu P, Almoril-Porras A, Aljobeh A, Torruella-Suárez ML, Ren I, Cook N, Greenwood J, Luo L, Wang ZW, Samuel ADT, Colón-Ramos DA.

Neuron. 2018 Jan 17;97(2):356-367.e4. doi: 10.1016/j.neuron.2017.12.027. Epub 2018 Jan 4.

8.

Clarinet (CLA-1), a novel active zone protein required for synaptic vesicle clustering and release.

Xuan Z, Manning L, Nelson J, Richmond JE, Colón-Ramos DA, Shen K, Kurshan PT.

Elife. 2017 Nov 21;6. pii: e29276. doi: 10.7554/eLife.29276.

9.
10.

KIF1A/UNC-104 Transports ATG-9 to Regulate Neurodevelopment and Autophagy at Synapses.

Stavoe AK, Hill SE, Hall DH, Colón-Ramos DA.

Dev Cell. 2016 Jul 25;38(2):171-85. doi: 10.1016/j.devcel.2016.06.012. Epub 2016 Jul 7.

11.

Glycolytic Enzymes Localize to Synapses under Energy Stress to Support Synaptic Function.

Jang S, Nelson JC, Bend EG, Rodríguez-Laureano L, Tueros FG, Cartagenova L, Underwood K, Jorgensen EM, Colón-Ramos DA.

Neuron. 2016 Apr 20;90(2):278-91. doi: 10.1016/j.neuron.2016.03.011. Epub 2016 Apr 7.

12.

Assessing a Science Graduate School Recruitment Symposium.

González-Espada W, Díaz-Muñoz G, Feliú-Mójer M, Flores-Otero J, Fortis-Santiago Y, Guerrero-Medina G, López-Casillas M, Colón-Ramos DA, Fernández-Repollet E.

Cuad Investig Educ. 2015 Dec;30:55-70.

13.

Untwisting the Caenorhabditis elegans embryo.

Christensen RP, Bokinsky A, Santella A, Wu Y, Marquina-Solis J, Guo M, Kovacevic I, Kumar A, Winter PW, Tashakkori N, McCreedy E, Liu H, McAuliffe M, Mohler W, Colón-Ramos DA, Bao Z, Shroff H.

Elife. 2015 Dec 3;4. pii: e10070. doi: 10.7554/eLife.10070.

14.

Dual-view plane illumination microscopy for rapid and spatially isotropic imaging.

Kumar A, Wu Y, Christensen R, Chandris P, Gandler W, McCreedy E, Bokinsky A, Colón-Ramos DA, Bao Z, McAuliffe M, Rondeau G, Shroff H.

Nat Protoc. 2014 Nov;9(11):2555-73. doi: 10.1038/nprot.2014.172. Epub 2014 Oct 9.

15.

Dynamic encoding of perception, memory, and movement in a C. elegans chemotaxis circuit.

Luo L, Wen Q, Ren J, Hendricks M, Gershow M, Qin Y, Greenwood J, Soucy ER, Klein M, Smith-Parker HK, Calvo AC, Colón-Ramos DA, Samuel AD, Zhang Y.

Neuron. 2014 Jun 4;82(5):1115-28. doi: 10.1016/j.neuron.2014.05.010.

16.

Bidirectional thermotaxis in Caenorhabditis elegans is mediated by distinct sensorimotor strategies driven by the AFD thermosensory neurons.

Luo L, Cook N, Venkatachalam V, Martinez-Velazquez LA, Zhang X, Calvo AC, Hawk J, MacInnis BL, Frank M, Ng JH, Klein M, Gershow M, Hammarlund M, Goodman MB, Colón-Ramos DA, Zhang Y, Samuel AD.

Proc Natl Acad Sci U S A. 2014 Feb 18;111(7):2776-81. doi: 10.1073/pnas.1315205111. Epub 2014 Feb 3.

17.

Supporting diversity in science through social networking.

Guerrero-Medina G, Feliú-Mójer M, González-Espada W, Díaz-Muñoz G, López M, Díaz-Muñoz SL, Fortis-Santiago Y, Flores-Otero J, Craig D, Colón-Ramos DA.

PLoS Biol. 2013 Dec;11(12):e1001740. doi: 10.1371/journal.pbio.1001740. Epub 2013 Dec 31. No abstract available.

18.

The LIM and POU homeobox genes ttx-3 and unc-86 act as terminal selectors in distinct cholinergic and serotonergic neuron types.

Zhang F, Bhattacharya A, Nelson JC, Abe N, Gordon P, Lloret-Fernandez C, Maicas M, Flames N, Mann RS, Colón-Ramos DA, Hobert O.

Development. 2014 Jan;141(2):422-35. doi: 10.1242/dev.099721. Epub 2013 Dec 18.

19.

Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy.

Wu Y, Wawrzusin P, Senseney J, Fischer RS, Christensen R, Santella A, York AG, Winter PW, Waterman CM, Bao Z, Colón-Ramos DA, McAuliffe M, Shroff H.

Nat Biotechnol. 2013 Nov;31(11):1032-8. doi: 10.1038/nbt.2713. Epub 2013 Oct 13.

20.

The cell biology of synaptic specificity during development.

Christensen R, Shao Z, Colón-Ramos DA.

Curr Opin Neurobiol. 2013 Dec;23(6):1018-26. doi: 10.1016/j.conb.2013.07.004. Epub 2013 Aug 6. Review.

21.

Synapse location during growth depends on glia location.

Shao Z, Watanabe S, Christensen R, Jorgensen EM, Colón-Ramos DA.

Cell. 2013 Jul 18;154(2):337-50. doi: 10.1016/j.cell.2013.06.028.

22.

The actin cytoskeleton in presynaptic assembly.

Nelson JC, Stavoe AK, Colón-Ramos DA.

Cell Adh Migr. 2013 Jul-Aug;7(4):379-87. doi: 10.4161/cam.24803. Epub 2013 Apr 29. Review.

23.

Serotonergic neurosecretory synapse targeting is controlled by netrin-releasing guidepost neurons in Caenorhabditis elegans.

Nelson JC, Colón-Ramos DA.

J Neurosci. 2013 Jan 23;33(4):1366-76. doi: 10.1523/JNEUROSCI.3471-12.2012.

24.

Synaptic vesicle clustering requires a distinct MIG-10/Lamellipodin isoform and ABI-1 downstream from Netrin.

Stavoe AK, Nelson JC, Martínez-Velázquez LA, Klein M, Samuel AD, Colón-Ramos DA.

Genes Dev. 2012 Oct 1;26(19):2206-21. doi: 10.1101/gad.193409.112.

25.

Netrin instructs synaptic vesicle clustering through Rac GTPase, MIG-10, and the actin cytoskeleton.

Stavoe AK, Colón-Ramos DA.

J Cell Biol. 2012 Apr 2;197(1):75-88. doi: 10.1083/jcb.201110127. Epub 2012 Mar 26.

26.

Netrin (UNC-6) mediates dendritic self-avoidance.

Smith CJ, Watson JD, VanHoven MK, Colón-Ramos DA, Miller DM 3rd.

Nat Neurosci. 2012 Mar 18;15(5):731-7. doi: 10.1038/nn.3065.

27.

A conserved PTEN/FOXO pathway regulates neuronal morphology during C. elegans development.

Christensen R, de la Torre-Ubieta L, Bonni A, Colón-Ramos DA.

Development. 2011 Dec;138(23):5257-67. doi: 10.1242/dev.069062.

28.

Nanoscopy in a living multicellular organism expressing GFP.

Rankin BR, Moneron G, Wurm CA, Nelson JC, Walter A, Schwarzer D, Schroeder J, Colón-Ramos DA, Hell SW.

Biophys J. 2011 Jun 22;100(12):L63-5. doi: 10.1016/j.bpj.2011.05.020.

29.

Synapse formation in developing neural circuits.

Colón-Ramos DA.

Curr Top Dev Biol. 2009;87:53-79. doi: 10.1016/S0070-2153(09)01202-2. Review.

PMID:
19427516
30.

Cellular conductors: glial cells as guideposts during neural circuit development.

Colón-Ramos DA, Shen K.

PLoS Biol. 2008 Apr 29;6(4):e112. doi: 10.1371/journal.pbio.0060112. No abstract available.

31.

Glia promote local synaptogenesis through UNC-6 (netrin) signaling in C. elegans.

Colón-Ramos DA, Margeta MA, Shen K.

Science. 2007 Oct 5;318(5847):103-6.

32.

Direct ribosomal binding by a cellular inhibitor of translation.

Colón-Ramos DA, Shenvi CL, Weitzel DH, Gan EC, Matts R, Cate J, Kornbluth S.

Nat Struct Mol Biol. 2006 Feb;13(2):103-11. Epub 2006 Jan 22.

33.

Inhibition of translation and induction of apoptosis by Bunyaviral nonstructural proteins bearing sequence similarity to reaper.

Colón-Ramos DA, Irusta PM, Gan EC, Olson MR, Song J, Morimoto RI, Elliott RM, Lombard M, Hollingsworth R, Hardwick JM, Smith GK, Kornbluth S.

Mol Biol Cell. 2003 Oct;14(10):4162-72. Epub 2003 Jul 11.

34.

A GH3-like domain in reaper is required for mitochondrial localization and induction of IAP degradation.

Olson MR, Holley CL, Gan EC, Colón-Ramos DA, Kaplan B, Kornbluth S.

J Biol Chem. 2003 Nov 7;278(45):44758-68. Epub 2003 Aug 13.

35.

Asymmetric distribution of nuclear pore complexes and the cytoplasmic localization of beta2-tubulin mRNA in Chlamydomonas reinhardtii.

Colón-Ramos DA, Salisbury JL, Sanders MA, Shenoy SM, Singer RH, García-Blanco MA.

Dev Cell. 2003 Jun;4(6):941-52.

36.

Reaper eliminates IAP proteins through stimulated IAP degradation and generalized translational inhibition.

Holley CL, Olson MR, Colón-Ramos DA, Kornbluth S.

Nat Cell Biol. 2002 Jun;4(6):439-44.

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