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Items: 1 to 50 of 61

1.

Correction: A microbial survey of the International Space Station (ISS).

Lang JM, Coil DA, Neches RY, Brown WE, Cavalier D, Severance M, Hampton-Marcell JT, Gilbert JA, Eisen JA.

PeerJ. 2018 Feb 27;5. pii: e4029/correction-1. doi: 10.7717/peerj.4029/correction-1. eCollection 2018.

2.

A microbial survey of the International Space Station (ISS).

Lang JM, Coil DA, Neches RY, Brown WE, Cavalier D, Severance M, Hampton-Marcell JT, Gilbert JA, Eisen JA.

PeerJ. 2017 Dec 5;5:e4029. doi: 10.7717/peerj.4029. eCollection 2017. Erratum in: PeerJ. 2018 Feb 27;5:.

3.

Schrödinger's microbes: Tools for distinguishing the living from the dead in microbial ecosystems.

Emerson JB, Adams RI, Román CMB, Brooks B, Coil DA, Dahlhausen K, Ganz HH, Hartmann EM, Hsu T, Justice NB, Paulino-Lima IG, Luongo JC, Lymperopoulou DS, Gomez-Silvan C, Rothschild-Mancinelli B, Balk M, Huttenhower C, Nocker A, Vaishampayan P, Rothschild LJ.

Microbiome. 2017 Aug 16;5(1):86. doi: 10.1186/s40168-017-0285-3. Review.

4.

Gut Check: The evolution of an educational board game.

Coil DA, Ettinger CL, Eisen JA.

PLoS Biol. 2017 Apr 28;15(4):e2001984. doi: 10.1371/journal.pbio.2001984. eCollection 2017 Apr.

6.

Draft Genome Sequence of Propionibacterium avidum Strain UCD-PD2 Isolated from a Feline Anal Sac.

Dahms PA, Martin AL, Ganz HH, Eisen JA, Coil DA.

Genome Announc. 2017 Mar 23;5(12). pii: e00034-17. doi: 10.1128/genomeA.00034-17.

7.

Genomic attributes of extended-spectrum β-lactamase-producing Escherichia coli isolated from patients in Lebanon.

Tokajian S, Salloum T, Eisen JA, Jospin G, Farra A, Mokhbat JE, Coil DA.

Future Microbiol. 2017 Mar;12:213-226. doi: 10.2217/fmb-2017-0171. Epub 2017 Feb 27.

PMID:
28262042
8.

Draft Genome Sequences of Dermacoccus nishinomiyaensis Strains UCD-KPL2534 and UCD-KPL2528 Isolated from an Indoor Track Facility.

Klein BA, Lemon KP, Gajare P, Jospin G, Eisen JA, Coil DA.

Genome Announc. 2017 Feb 23;5(8). pii: e01652-16. doi: 10.1128/genomeA.01652-16.

9.

Draft Genome Sequence of Arthrobacter sp. Strain UCD-GKA (Phylum Actinobacteria).

Kincheloe GN, Eisen JA, Coil DA.

Genome Announc. 2017 Feb 9;5(6). pii: e01599-16. doi: 10.1128/genomeA.01599-16.

11.

Draft Genome Sequence of Enterococcus faecalis Strain UCD-PD3.

De Vries DR, Martin AL, Ganz HH, Eisen JA, Coil DA.

Genome Announc. 2016 Dec 15;4(6). pii: e01386-16. doi: 10.1128/genomeA.01386-16.

12.

Genome Analysis of Streptococcus pyogenes Associated with Pharyngitis and Skin Infections.

Ibrahim J, Eisen JA, Jospin G, Coil DA, Khazen G, Tokajian S.

PLoS One. 2016 Dec 15;11(12):e0168177. doi: 10.1371/journal.pone.0168177. eCollection 2016.

13.

Draft Genome Sequence of Curtobacterium sp. Strain UCD-KPL2560 (Phylum Actinobacteria).

Klein BA, Lemon KP, Faller LL, Jospin G, Eisen JA, Coil DA.

Genome Announc. 2016 Oct 6;4(5). pii: e01040-16. doi: 10.1128/genomeA.01040-16.

14.

Draft Genome Sequence of Gordonia sp. Strain UCD-TK1 (Phylum Actinobacteria).

Koenigsaecker TM, Eisen JA, Coil DA.

Genome Announc. 2016 Oct 13;4(5). pii: e01121-16. doi: 10.1128/genomeA.01121-16.

15.

Draft Genome Sequence of Tenacibaculum soleae UCD-KL19.

Lujan KM, Eisen JA, Coil DA.

Genome Announc. 2016 Oct 13;4(5). pii: e01120-16. doi: 10.1128/genomeA.01120-16.

16.

Draft Genome Sequences of Shewanella sp. Strain UCD-FRSP16_17 and Nine Vibrio Strains Isolated from Abalone Feces.

Vater A, Agbonavbare V, Carlin DA, Carruthers GM, Chac A, Doroud L, Farris SJ, Gudzeva M, Jospin G, Kintner JA, Knauss JP, Lor Y, Pechacek R, Rohner ES, Simmons SM, Verescshagina M, Wirawan CS, Zagal L, Coil DA.

Genome Announc. 2016 Sep 15;4(5). pii: e00977-16. doi: 10.1128/genomeA.00977-16.

17.

Draft Genome Sequence of Klebsiella pneumoniae UCD-JA29 Isolated from a Patient with Sepsis.

Alexiev A, Coil DA, Jospin G, Eisen JA, Adams JY.

Genome Announc. 2016 May 5;4(3). pii: e00234-16. doi: 10.1128/genomeA.00234-16.

18.

Growth of 48 built environment bacterial isolates on board the International Space Station (ISS).

Coil DA, Neches RY, Lang JM, Brown WE, Severance M, Cavalier D, Eisen JA.

PeerJ. 2016 Mar 22;4:e1842. doi: 10.7717/peerj.1842. eCollection 2016.

19.

Draft Genome Sequences of Two Pseudoalteromonas porphyrae Strains Isolated from Seagrass Sediment.

Lee RD, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2016 Mar 17;4(2). pii: e00092-16. doi: 10.1128/genomeA.00092-16.

20.

Draft Genome Sequence of Cobetia sp. UCD-24C, Isolated from Roots and Leaves of the Seagrass Zostera marina.

Alexiev A, Krusor ML, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2016 Mar 10;4(2). pii: e00116-16. doi: 10.1128/genomeA.00116-16.

21.

Draft Genome Sequences of Two Vibrio splendidus Strains, Isolated from Seagrass Sediment.

Lee RD, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2016 Feb 18;4(1). pii: e01769-15. doi: 10.1128/genomeA.01769-15.

22.

Draft Genome Sequences of Two Pseudoalteromonas Strains Isolated from Roots and Leaf Blades of the Seagrass Zostera marina.

Alexiev A, Krusor ML, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2016 Feb 18;4(1). pii: e00010-16. doi: 10.1128/genomeA.00010-16.

23.

Draft Genome Sequences of Acinetobacter baumannii Strains Harboring the blaNDM-1 Gene Isolated in Lebanon from Civilians Wounded during the Syrian Civil War.

Tokajian S, Eisen JA, Jospin G, Hamze M, Rafei R, Salloum T, Ibrahim J, Coil DA.

Genome Announc. 2016 Jan 28;4(1). pii: e01678-15. doi: 10.1128/genomeA.01678-15.

24.

Draft Genome Sequence of Klebsiella pneumoniae KGM-IMP216 Harboring blaCTX-M-15, blaDHA-1, blaTEM-1B, blaNDM-1, blaSHV-28, and blaOXA-1, Isolated from a Patient in Lebanon.

Tokajian S, Eisen JA, Jospin G, Matar G, Araj GF, Coil DA.

Genome Announc. 2016 Jan 28;4(1). pii: e01632-15. doi: 10.1128/genomeA.01632-15.

25.

Additional Draft Genome Sequences of Escherichia coli Strains Isolated from Septic Patients.

Coil DA, Jospin G, Eisen JA, Adams JY.

Genome Announc. 2016 Jan 21;4(1). pii: e01614-15. doi: 10.1128/genomeA.01614-15.

26.

Porphyrobacter mercurialis sp. nov., isolated from a stadium seat and emended description of the genus Porphyrobacter.

Coil DA, Flanagan JC, Stump A, Alexiev A, Lang JM, Eisen JA.

PeerJ. 2015 Nov 12;3:e1400. doi: 10.7717/peerj.1400. eCollection 2015.

27.

Draft Genome Sequence of Bacillus vietnamensis Strain UCD-SED5 (Phylum Firmicutes).

Lee RD, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2015 Nov 19;3(6). pii: e01376-15. doi: 10.1128/genomeA.01376-15.

28.

Draft Genome Sequence of Bacillus safensis JPL-MERTA-8-2, Isolated from a Mars-Bound Spacecraft.

Coil DA, Benardini JN, Eisen JA.

Genome Announc. 2015 Nov 19;3(6). pii: e01360-15. doi: 10.1128/genomeA.01360-15.

29.

Draft Genome Sequence of Porphyrobacter mercurialis (sp. nov.) Strain Coronado.

Coil DA, Eisen JA.

Genome Announc. 2015 Nov 19;3(6). pii: e00856-15. doi: 10.1128/genomeA.00856-15.

30.

Draft Genome Sequence of Pseudoalteromonas tetraodonis Strain UCD-SED8 (Phylum Gammaproteobacteria).

Lee RD, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2015 Nov 5;3(6). pii: e01276-15. doi: 10.1128/genomeA.01276-15.

31.

Draft Genome Sequence of Planomicrobium glaciei UCD-HAM (Phylum Firmicutes).

Betts MN, Jospin G, Eisen JA, Coil DA.

Genome Announc. 2015 Oct 15;3(5). pii: e01209-15. doi: 10.1128/genomeA.01209-15.

32.

Swabs to genomes: a comprehensive workflow.

Dunitz MI, Lang JM, Jospin G, Darling AE, Eisen JA, Coil DA.

PeerJ. 2015 May 14;3:e960. doi: 10.7717/peerj.960. eCollection 2015.

33.

Whole genome sequencing of extended-spectrum β-lactamase producing Klebsiella pneumoniae isolated from a patient in Lebanon.

Tokajian S, Eisen JA, Jospin G, Farra A, Coil DA.

Front Cell Infect Microbiol. 2015 Apr 8;5:32. doi: 10.3389/fcimb.2015.00032. eCollection 2015.

34.

Draft genome sequences of 26 porphyromonas strains isolated from the canine oral microbiome.

Coil DA, Alexiev A, Wallis C, O'Flynn C, Deusch O, Davis I, Horsfall A, Kirkwood N, Jospin G, Eisen JA, Harris S, Darling AE.

Genome Announc. 2015 Apr 9;3(2). pii: e00187-15. doi: 10.1128/genomeA.00187-15.

35.

Draft Genome Sequences of Escherichia coli Strains Isolated from Septic Patients.

Dunitz MI, Coil DA, Jospin G, Eisen JA, Adams JY.

Genome Announc. 2014 Dec 18;2(6). pii: e01278-14. doi: 10.1128/genomeA.01278-14.

36.

Draft Genome Sequence of Rhizobium rhizogenes Strain ATCC 15834.

Kajala K, Coil DA, Brady SM.

Genome Announc. 2014 Oct 30;2(5). pii: e01108-14. doi: 10.1128/genomeA.01108-14.

37.

Draft Genome Sequence of the Pyridinediol-Fermenting Bacterium Synergistes jonesii 78-1.

Holland-Moritz HE, Coil DA, Badger JH, Dmitrov GI, Khouri H, Ward NL, Robb FT, Eisen JA.

Genome Announc. 2014 Aug 21;2(4). pii: e00833-14. doi: 10.1128/genomeA.00833-14.

38.

Draft Genome Sequence of the Endosymbiont "Candidatus Ruthia magnifica" UCD-CM (Phylum Proteobacteria).

Lee RD, Jospin G, Coil DA, Eisen JA.

Genome Announc. 2014 Jul 17;2(4). pii: e00717-14. doi: 10.1128/genomeA.00717-14.

39.

microBEnet: lessons learned from building an interdisciplinary scientific community in the online sphere.

Bik HM, Coil DA, Eisen JA.

PLoS Biol. 2014 Jun 17;12(6):e1001884. doi: 10.1371/journal.pbio.1001884. eCollection 2014 Jun. No abstract available.

40.

Complete Genome Sequence of Coprothermobacter proteolyticus DSM 5265.

Alexiev A, Coil DA, Badger JH, Enticknap J, Ward N, Robb FT, Eisen JA.

Genome Announc. 2014 May 15;2(3). pii: e00470-14. doi: 10.1128/genomeA.00470-14.

41.

Draft Genome Sequences of Streptococcus pyogenes Strains Associated with Throat and Skin Infections in Lebanon.

Tokajian S, Eisen JA, Jospin G, Coil DA.

Genome Announc. 2014 May 15;2(3). pii: e00358-14. doi: 10.1128/genomeA.00358-14.

42.

Draft Genome Sequence of Tatumella sp. Strain UCD-D_suzukii (Phylum Proteobacteria) Isolated from Drosophila suzukii Larvae.

Dunitz MI, James PM, Jospin G, Eisen JA, Coil DA, Chandler JA.

Genome Announc. 2014 Apr 24;2(2). pii: e00349-14. doi: 10.1128/genomeA.00349-14.

43.

Draft Genome Sequences of Extended-Spectrum β-Lactamase-Producing Escherichia coli Strains Isolated from Patients in Lebanon.

Tokajian S, Eisen JA, Jospin G, Farra A, Coil DA.

Genome Announc. 2014 Feb 20;2(1). pii: e00123-14. doi: 10.1128/genomeA.00123-14.

44.

Draft Genome Sequence of Extended-Spectrum β-Lactamase-Producing Klebsiella pneumoniae Isolated from a Patient in Lebanon.

Tokajian S, Eisen JA, Jospin G, Farra A, Coil DA.

Genome Announc. 2014 Feb 20;2(1). pii: e00121-14. doi: 10.1128/genomeA.00121-14.

45.

Complete Genome Sequence of the Extreme Thermophile Dictyoglomus thermophilum H-6-12.

Coil DA, Badger JH, Forberger HC, Riggs F, Madupu R, Fedorova N, Ward N, Robb FT, Eisen JA.

Genome Announc. 2014 Feb 20;2(1). pii: e00109-14. doi: 10.1128/genomeA.00109-14.

46.

Draft Genome Sequence of the Arsenate-Respiring Bacterium Chrysiogenes arsenatis Strain DSM 11915.

Coil DA, Lo JR, Chen R, Ward N, Robb FT, Eisen JA.

Genome Announc. 2013 Nov 14;1(6). pii: e00953-13. doi: 10.1128/genomeA.00953-13.

47.

Draft Genome Sequence of Leucobacter sp. Strain UCD-THU (Phylum Actinobacteria).

Holland-Moritz HE, Bevans DR, Lang JM, Darling AE, Eisen JA, Coil DA.

Genome Announc. 2013 Jun 27;1(3). pii: e00325-13. doi: 10.1128/genomeA.00325-13.

48.

Draft Genome Sequence of Curtobacterium flaccumfaciens Strain UCD-AKU (Phylum Actinobacteria).

Flanagan JC, Lang JM, Darling AE, Eisen JA, Coil DA.

Genome Announc. 2013 May 16;1(3). pii: e00244-13. doi: 10.1128/genomeA.00244-13.

49.

Draft Genome Sequence of Dietzia sp. Strain UCD-THP (Phylum Actinobacteria).

Diep AL, Lang JM, Darling AE, Eisen JA, Coil DA.

Genome Announc. 2013 May 9;1(3). pii: e00197-13. doi: 10.1128/genomeA.00197-13.

50.

Draft Genome Sequence of Kocuria sp. Strain UCD-OTCP (Phylum Actinobacteria).

Coil DA, Doctor JI, Lang JM, Darling AE, Eisen JA.

Genome Announc. 2013 May 9;1(3). pii: e00172-13. doi: 10.1128/genomeA.00172-13.

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