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Items: 1 to 50 of 67

1.

A key role for sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus.

Mignerot L, Avia K, Luthringer R, Lipinska AP, Peters AF, Cock JM, Coelho SM.

PLoS Genet. 2019 Jun 13;15(6):e1008211. doi: 10.1371/journal.pgen.1008211. [Epub ahead of print]

PMID:
31194744
2.

Correction to: Rapid turnover of life-cycle-related genes in the brown algae.

Lipinska AP, Serrano-Serrano ML, Cormier A, Peters AF, Kogame K, Cock JM, Coelho SM.

Genome Biol. 2019 Feb 22;20(1):44. doi: 10.1186/s13059-019-1657-8.

3.

Rapid turnover of life-cycle-related genes in the brown algae.

Lipinska AP, Serrano-Serrano ML, Cormier A, Peters AF, Kogame K, Cock JM, Coelho SM.

Genome Biol. 2019 Feb 14;20(1):35. doi: 10.1186/s13059-019-1630-6. Erratum in: Genome Biol. 2019 Feb 22;20(1):44.

4.

Origin and evolution of sex-determination systems in the brown algae.

Coelho SM, Mignerot L, Cock JM.

New Phytol. 2019 Jun;222(4):1751-1756. doi: 10.1111/nph.15694. Epub 2019 Feb 21. Review.

PMID:
30667071
5.

Convergent recruitment of TALE homeodomain life cycle regulators to direct sporophyte development in land plants and brown algae.

Arun A, Coelho SM, Peters AF, Bourdareau S, Pérès L, Scornet D, Strittmatter M, Lipinska AP, Yao H, Godfroy O, Montecinos GJ, Avia K, Macaisne N, Troadec C, Bendahmane A, Cock JM.

Elife. 2019 Jan 15;8. pii: e43101. doi: 10.7554/eLife.43101.

6.

UV Chromosomes and Haploid Sexual Systems.

Coelho SM, Gueno J, Lipinska AP, Cock JM, Umen JG.

Trends Plant Sci. 2018 Sep;23(9):794-807. doi: 10.1016/j.tplants.2018.06.005. Epub 2018 Jul 12. Review.

PMID:
30007571
7.

Short communication: Extended-spectrum AmpC-producing Escherichia coli from milk and feces in dairy farms in Brazil.

Santiago GS, Coelho IS, Bronzato GF, Moreira AB, Gonçalves D, Alencar TA, Ferreira HN, Castro BG, Souza MMS, Coelho SMO.

J Dairy Sci. 2018 Sep;101(9):7808-7811. doi: 10.3168/jds.2017-13658. Epub 2018 Jun 21.

PMID:
29935831
8.

Genetic Diversity in the UV Sex Chromosomes of the Brown Alga Ectocarpus.

Avia K, Lipinska AP, Mignerot L, Montecinos AE, Jamy M, Ahmed S, Valero M, Peters AF, Cock JM, Roze D, Coelho SM.

Genes (Basel). 2018 Jun 6;9(6). pii: E286. doi: 10.3390/genes9060286.

9.

DISTAG/TBCCd1 Is Required for Basal Cell Fate Determination in Ectocarpus.

Godfroy O, Uji T, Nagasato C, Lipinska AP, Scornet D, Peters AF, Avia K, Colin S, Mignerot L, Motomura T, Cock JM, Coelho SM.

Plant Cell. 2017 Dec;29(12):3102-3122. doi: 10.1105/tpc.17.00440. Epub 2017 Dec 5.

10.

The Algal Revolution.

Brodie J, Chan CX, De Clerck O, Cock JM, Coelho SM, Gachon C, Grossman AR, Mock T, Raven JA, Smith AG, Yoon HS, Bhattacharya D.

Trends Plant Sci. 2017 Aug;22(8):726-738. doi: 10.1016/j.tplants.2017.05.005. Epub 2017 Jun 10. Review.

PMID:
28610890
11.

Multiple gene movements into and out of haploid sex chromosomes.

Lipinska AP, Toda NRT, Heesch S, Peters AF, Cock JM, Coelho SM.

Genome Biol. 2017 Jun 8;18(1):104. doi: 10.1186/s13059-017-1201-7.

12.

Residual determination of anesthetic menthol in fishes by SDME/GC-MS.

Botrel BM, Abreu DC, Saczk AA, Bazana MJ, Coelho SM, E Rosa PV, Magriotis ZM, de Lima RM.

Food Chem. 2017 Aug 15;229:674-679. doi: 10.1016/j.foodchem.2017.02.087. Epub 2017 Feb 21.

13.

Rapid Evolution of microRNA Loci in the Brown Algae.

Cock JM, Liu F, Duan D, Bourdareau S, Lipinska AP, Coelho SM, Tarver JE.

Genome Biol Evol. 2017 Mar 1;9(3):740-749. doi: 10.1093/gbe/evx038.

14.

High-density genetic map and identification of QTLs for responses to temperature and salinity stresses in the model brown alga Ectocarpus.

Avia K, Coelho SM, Montecinos GJ, Cormier A, Lerck F, Mauger S, Faugeron S, Valero M, Cock JM, Boudry P.

Sci Rep. 2017 Mar 3;7:43241. doi: 10.1038/srep43241.

15.

The Ectocarpus IMMEDIATE UPRIGHT gene encodes a member of a novel family of cysteine-rich proteins with an unusual distribution across the eukaryotes.

Macaisne N, Liu F, Scornet D, Peters AF, Lipinska A, Perrineau MM, Henry A, Strittmatter M, Coelho SM, Cock JM.

Development. 2017 Feb 1;144(3):409-418. doi: 10.1242/dev.141523. Epub 2017 Jan 3.

16.

Biofilm production and beta-lactamic resistance in Brazilian Staphylococcus aureus isolates from bovine mastitis.

Marques VF, Motta CC, Soares BD, Melo DA, Coelho SM, Coelho ID, Barbosa HS, Souza MM.

Braz J Microbiol. 2017 Jan - Mar;48(1):118-124. doi: 10.1016/j.bjm.2016.10.001. Epub 2016 Oct 18.

17.

Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus.

Cormier A, Avia K, Sterck L, Derrien T, Wucher V, Andres G, Monsoor M, Godfroy O, Lipinska A, Perrineau MM, Van De Peer Y, Hitte C, Corre E, Coelho SM, Cock JM.

New Phytol. 2017 Apr;214(1):219-232. doi: 10.1111/nph.14321. Epub 2016 Nov 21.

18.

The Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) identification versus biochemical tests: a study with enterobacteria from a dairy cattle environment.

Rodrigues NM, Bronzato GF, Santiago GS, Botelho LA, Moreira BM, Coelho ID, Souza MM, Coelho SM.

Braz J Microbiol. 2017 Jan - Mar;48(1):132-138. doi: 10.1016/j.bjm.2016.07.025. Epub 2016 Sep 21.

19.

The origin and evolution of the sexes: Novel insights from a distant eukaryotic linage.

Mignerot L, Coelho SM.

C R Biol. 2016 Jul-Aug;339(7-8):252-7. doi: 10.1016/j.crvi.2016.04.012. Epub 2016 May 25. Review.

20.

Epidemiological profile and postoperative complications of women undergoing gynecological surgery in a reference center in the northern Brazilian legal Amazon.

Coelho SM, Perez Ede L, Lins CD, Gomes MT, Bella ZI, Andres Mde P, Podgaec S.

Rev Col Bras Cir. 2015 Nov-Dec;42(6):372-5. doi: 10.1590/0100-69912015006004. English, Portuguese.

21.

Development of PCR-Based Markers to Determine the Sex of Kelps.

Lipinska AP, Ahmed S, Peters AF, Faugeron S, Cock JM, Coelho SM.

PLoS One. 2015 Oct 23;10(10):e0140535. doi: 10.1371/journal.pone.0140535. eCollection 2015.

22.

The Pseudoautosomal Regions of the U/V Sex Chromosomes of the Brown Alga Ectocarpus Exhibit Unusual Features.

Luthringer R, Lipinska AP, Roze D, Cormier A, Macaisne N, Peters AF, Cock JM, Coelho SM.

Mol Biol Evol. 2015 Nov;32(11):2973-85. doi: 10.1093/molbev/msv173. Epub 2015 Aug 6.

23.

microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown alga Ectocarpus.

Tarver JE, Cormier A, Pinzón N, Taylor RS, Carré W, Strittmatter M, Seitz H, Coelho SM, Cock JM.

Nucleic Acids Res. 2015 Jul 27;43(13):6384-98. doi: 10.1093/nar/gkv578. Epub 2015 Jun 22.

24.

Evolution and maintenance of haploid-diploid life cycles in natural populations: The case of the marine brown alga Ectocarpus.

Couceiro L, Le Gac M, Hunsperger HM, Mauger S, Destombe C, Cock JM, Ahmed S, Coelho SM, Valero M, Peters AF.

Evolution. 2015 Jul;69(7):1808-22. doi: 10.1111/evo.12702. Epub 2015 Jul 15.

PMID:
26096000
25.

Genome-wide comparison of ultraviolet and ethyl methanesulphonate mutagenesis methods for the brown alga Ectocarpus.

Godfroy O, Peters AF, Coelho SM, Cock JM.

Mar Genomics. 2015 Dec;24 Pt 1:109-13. doi: 10.1016/j.margen.2015.03.007. Epub 2015 Apr 7.

PMID:
25861732
26.

Sexual dimorphism and the evolution of sex-biased gene expression in the brown alga ectocarpus.

Lipinska A, Cormier A, Luthringer R, Peters AF, Corre E, Gachon CM, Cock JM, Coelho SM.

Mol Biol Evol. 2015 Jun;32(6):1581-97. doi: 10.1093/molbev/msv049. Epub 2015 Feb 27.

PMID:
25725430
27.

Genetic analysis of mecA gene and detection of homologue pbpD in Stahylococcus sciuri group.

Calazans-Silva AC, Medeiros PT, Araujo DM, Carvalho BO, Coelho IS, Coelho SM, Souza MM.

Braz J Microbiol. 2014 Aug 29;45(2):651-5. eCollection 2014.

28.

A haploid system of sex determination in the brown alga Ectocarpus sp.

Ahmed S, Cock JM, Pessia E, Luthringer R, Cormier A, Robuchon M, Sterck L, Peters AF, Dittami SM, Corre E, Valero M, Aury JM, Roze D, Van de Peer Y, Bothwell J, Marais GA, Coelho SM.

Curr Biol. 2014 Sep 8;24(17):1945-57. doi: 10.1016/j.cub.2014.07.042. Epub 2014 Aug 28.

29.

Evolution and regulation of complex life cycles: a brown algal perspective.

Cock JM, Godfroy O, Macaisne N, Peters AF, Coelho SM.

Curr Opin Plant Biol. 2014 Feb;17:1-6. doi: 10.1016/j.pbi.2013.09.004. Epub 2013 Oct 26. Review.

PMID:
24507487
30.

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.

Collén J, Porcel B, Carré W, Ball SG, Chaparro C, Tonon T, Barbeyron T, Michel G, Noel B, Valentin K, Elias M, Artiguenave F, Arun A, Aury JM, Barbosa-Neto JF, Bothwell JH, Bouget FY, Brillet L, Cabello-Hurtado F, Capella-Gutiérrez S, Charrier B, Cladière L, Cock JM, Coelho SM, Colleoni C, Czjzek M, Da Silva C, Delage L, Denoeud F, Deschamps P, Dittami SM, Gabaldón T, Gachon CM, Groisillier A, Hervé C, Jabbari K, Katinka M, Kloareg B, Kowalczyk N, Labadie K, Leblanc C, Lopez PJ, McLachlan DH, Meslet-Cladiere L, Moustafa A, Nehr Z, Nyvall Collén P, Panaud O, Partensky F, Poulain J, Rensing SA, Rousvoal S, Samson G, Symeonidi A, Weissenbach J, Zambounis A, Wincker P, Boyen C.

Proc Natl Acad Sci U S A. 2013 Mar 26;110(13):5247-52. doi: 10.1073/pnas.1221259110. Epub 2013 Mar 15.

31.

Brown algae as a model for plant organogenesis.

Bogaert KA, Arun A, Coelho SM, De Clerck O.

Methods Mol Biol. 2013;959:97-125. doi: 10.1007/978-1-62703-221-6_6.

PMID:
23299670
32.

Non-cell autonomous regulation of life cycle transitions in the model brown alga Ectocarpus.

Arun A, Peters NT, Scornet D, Peters AF, Mark Cock J, Coelho SM.

New Phytol. 2013 Jan;197(2):503-10. doi: 10.1111/nph.12007. Epub 2012 Oct 29.

33.

Ecological and evolutionary genomics of marine photosynthetic organisms.

Coelho SM, Simon N, Ahmed S, Cock JM, Partensky F.

Mol Ecol. 2013 Feb;22(3):867-907. doi: 10.1111/mec.12000. Epub 2012 Sep 18. Review.

PMID:
22989289
34.

Immunostaining of Ectocarpus cells.

Coelho SM, Scornet D, Rousvoal S, Peters N, Dartevelle L, Peters AF, Cock JM.

Cold Spring Harb Protoc. 2012 Mar 1;2012(3):369-72. doi: 10.1101/pdb.prot067975.

PMID:
22383639
35.

Extraction of high-quality genomic DNA from Ectocarpus.

Coelho SM, Scornet D, Rousvoal S, Peters N, Dartevelle L, Peters AF, Cock JM.

Cold Spring Harb Protoc. 2012 Mar 1;2012(3):365-8. doi: 10.1101/pdb.prot067967.

PMID:
22383638
36.

Isolation and regeneration of protoplasts from Ectocarpus.

Coelho SM, Scornet D, Rousvoal S, Peters N, Dartevelle L, Peters AF, Cock JM.

Cold Spring Harb Protoc. 2012 Mar 1;2012(3):361-4. doi: 10.1101/pdb.prot067959.

PMID:
22383637
37.

Genetic crosses between Ectocarpus strains.

Coelho SM, Scornet D, Rousvoal S, Peters N, Dartevelle L, Peters AF, Cock JM.

Cold Spring Harb Protoc. 2012 Feb 1;2012(2):262-5. doi: 10.1101/pdb.prot067942.

PMID:
22301663
38.

How to cultivate Ectocarpus.

Coelho SM, Scornet D, Rousvoal S, Peters NT, Dartevelle L, Peters AF, Cock JM.

Cold Spring Harb Protoc. 2012 Feb 1;2012(2):258-61. doi: 10.1101/pdb.prot067934.

PMID:
22301662
39.

Ectocarpus: a model organism for the brown algae.

Coelho SM, Scornet D, Rousvoal S, Peters NT, Dartevelle L, Peters AF, Cock JM.

Cold Spring Harb Protoc. 2012 Feb 1;2012(2):193-8. doi: 10.1101/pdb.emo065821.

PMID:
22301644
40.

Genetic regulation of life cycle transitions in the brown alga Ectocarpus.

Coelho SM, Godfroy O, Arun A, Le Corguillé G, Peters AF, Cock JM.

Plant Signal Behav. 2011 Nov;6(11):1858-60. doi: 10.4161/psb.6.11.17737. Epub 2011 Nov 1.

41.

Brown algae.

Cock JM, Peters AF, Coelho SM.

Curr Biol. 2011 Aug 9;21(15):R573-5. doi: 10.1016/j.cub.2011.05.006. No abstract available.

42.

OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus.

Coelho SM, Godfroy O, Arun A, Le Corguillé G, Peters AF, Cock JM.

Proc Natl Acad Sci U S A. 2011 Jul 12;108(28):11518-23. doi: 10.1073/pnas.1102274108. Epub 2011 Jun 27.

43.

Short communication: profile of virulence factors of Staphylococcus aureus isolated from subclinical bovine mastitis in the state of Rio de Janeiro, Brazil.

Coelho SM, Pereira IA, Soares LC, Pribul BR, Souza MM.

J Dairy Sci. 2011 Jul;94(7):3305-10. doi: 10.3168/jds.2010-3229.

44.

Algal models in plant biology.

Cock JM, Coelho SM.

J Exp Bot. 2011 May;62(8):2425-30. doi: 10.1093/jxb/err117. No abstract available.

PMID:
21576398
45.

Follow-up of patients treated with retinoic acid for the control of radioiodine non-responsive advanced thyroid carcinoma.

Coelho SM, Vaisman F, Buescu A, Mello RC, Carvalho DP, Vaisman M.

Braz J Med Biol Res. 2011 Jan;44(1):73-7. Epub 2010 Nov 12.

46.

Cell cycles and endocycles in the model brown seaweed, Ectocarpus siliculosus.

Bothwell JH, Marie D, Peters AF, Cock JM, Coelho SM.

Plant Signal Behav. 2010 Nov;5(11):1473-5. Epub 2010 Nov 1.

47.

A compact streak camera for 150 fs time resolved measurement of bright pulses in ultrafast electron diffraction.

Kassier GH, Haupt K, Erasmus N, Rohwer EG, von Bergmann HM, Schwoerer H, Coelho SM, Auret FD.

Rev Sci Instrum. 2010 Oct;81(10):105103. doi: 10.1063/1.3489118.

PMID:
21034115
48.

The Ectocarpus genome sequence: insights into brown algal biology and the evolutionary diversity of the eukaryotes.

Cock JM, Coelho SM, Brownlee C, Taylor AR.

New Phytol. 2010 Oct;188(1):1-4. doi: 10.1111/j.1469-8137.2010.03454.x. No abstract available.

49.

Role of endoreduplication and apomeiosis during parthenogenetic reproduction in the model brown alga Ectocarpus.

Bothwell JH, Marie D, Peters AF, Cock JM, Coelho SM.

New Phytol. 2010 Oct;188(1):111-21. doi: 10.1111/j.1469-8137.2010.03357.x. Epub 2010 Jul 2.

50.

The Ectocarpus genome and the independent evolution of multicellularity in brown algae.

Cock JM, Sterck L, Rouzé P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collén J, Corre E, Da Silva C, Delage L, Delaroque N, Dittami SM, Doulbeau S, Elias M, Farnham G, Gachon CM, Gschloessl B, Heesch S, Jabbari K, Jubin C, Kawai H, Kimura K, Kloareg B, Küpper FC, Lang D, Le Bail A, Leblanc C, Lerouge P, Lohr M, Lopez PJ, Martens C, Maumus F, Michel G, Miranda-Saavedra D, Morales J, Moreau H, Motomura T, Nagasato C, Napoli CA, Nelson DR, Nyvall-Collén P, Peters AF, Pommier C, Potin P, Poulain J, Quesneville H, Read B, Rensing SA, Ritter A, Rousvoal S, Samanta M, Samson G, Schroeder DC, Ségurens B, Strittmatter M, Tonon T, Tregear JW, Valentin K, von Dassow P, Yamagishi T, Van de Peer Y, Wincker P.

Nature. 2010 Jun 3;465(7298):617-21. doi: 10.1038/nature09016.

PMID:
20520714

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