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Items: 30

1.

Developing System-Level Awareness Through Virtual Clinical Learning.

Merriam D, Fisher JM, Cody AJ, Nirelli PA.

Nurs Educ Perspect. 2020 Jan/Feb;41(1):61-62. doi: 10.1097/01.NEP.0000000000000417.

PMID:
31860494
2.

A systematic review of source attribution of human campylobacteriosis using multilocus sequence typing.

Cody AJ, Maiden MC, Strachan NJ, McCarthy ND.

Euro Surveill. 2019 Oct;24(43). doi: 10.2807/1560-7917.ES.2019.24.43.1800696.

3.

Domestication of Campylobacter jejuni NCTC 11168.

Pascoe B, Williams LK, Calland JK, Meric G, Hitchings MD, Dyer M, Ryder J, Shaw S, Lopes BS, Chintoan-Uta C, Allan E, Vidal A, Fearnley C, Everest P, Pachebat JA, Cogan TA, Stevens MP, Humphrey TJ, Wilkinson TS, Cody AJ, Colles FM, Jolley KA, Maiden MCJ, Strachan N, Pearson BM, Linton D, Wren BW, Parkhill J, Kelly DJ, van Vliet AHM, Forbes KJ, Sheppard SK.

Microb Genom. 2019 Jul;5(7). doi: 10.1099/mgen.0.000279. Epub 2019 Jul 16.

4.

Developing System-Level Awareness Through Virtual Clinical Learning.

Merriam D, Fisher JM, Cody AJ, Nirelli PA.

Nurs Educ Perspect. 2018 Nov 7. doi: 10.1097/01.NEP.0000000000000417. [Epub ahead of print]

PMID:
30407986
5.

Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.

Pascoe B, Méric G, Yahara K, Wimalarathna H, Murray S, Hitchings MD, Sproston EL, Carrillo CD, Taboada EN, Cooper KK, Huynh S, Cody AJ, Jolley KA, Maiden MCJ, McCarthy ND, Didelot X, Parker CT, Sheppard SK.

Mol Ecol. 2017 Sep;26(17):4497-4508. doi: 10.1111/mec.14176. Epub 2017 Jun 19.

6.

Core Genome Multilocus Sequence Typing Scheme for Stable, Comparative Analyses of Campylobacter jejuni and C. coli Human Disease Isolates.

Cody AJ, Bray JE, Jolley KA, McCarthy ND, Maiden MCJ.

J Clin Microbiol. 2017 Jul;55(7):2086-2097. doi: 10.1128/JCM.00080-17. Epub 2017 Apr 26.

7.

Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork.

Yahara K, Méric G, Taylor AJ, de Vries SP, Murray S, Pascoe B, Mageiros L, Torralbo A, Vidal A, Ridley A, Komukai S, Wimalarathna H, Cody AJ, Colles FM, McCarthy N, Harris D, Bray JE, Jolley KA, Maiden MC, Bentley SD, Parkhill J, Bayliss CD, Grant A, Maskell D, Didelot X, Kelly DJ, Sheppard SK.

Environ Microbiol. 2017 Jan;19(1):361-380. doi: 10.1111/1462-2920.13628.

8.

Exploiting Bacterial Whole-Genome Sequencing Data for Evaluation of Diagnostic Assays: Campylobacter Species Identification as a Case Study.

Jansen van Rensburg MJ, Swift C, Cody AJ, Jenkins C, Maiden MC.

J Clin Microbiol. 2016 Dec;54(12):2882-2890. Epub 2016 Oct 12.

9.

Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections.

Dearlove BL, Cody AJ, Pascoe B, Méric G, Wilson DJ, Sheppard SK.

ISME J. 2016 Mar;10(3):721-9. doi: 10.1038/ismej.2015.149. Epub 2015 Aug 25.

10.

Wild bird-associated Campylobacter jejuni isolates are a consistent source of human disease, in Oxfordshire, United Kingdom.

Cody AJ, McCarthy ND, Bray JE, Wimalarathna HM, Colles FM, Jansen van Rensburg MJ, Dingle KE, Waldenström J, Maiden MC.

Environ Microbiol Rep. 2015 Oct;7(5):782-8. doi: 10.1111/1758-2229.12314. Epub 2015 Sep 8.

11.

Defining the estimated core genome of bacterial populations using a Bayesian decision model.

van Tonder AJ, Mistry S, Bray JE, Hill DM, Cody AJ, Farmer CL, Klugman KP, von Gottberg A, Bentley SD, Parkhill J, Jolley KA, Maiden MC, Brueggemann AB.

PLoS Comput Biol. 2014 Aug 21;10(8):e1003788. doi: 10.1371/journal.pcbi.1003788. eCollection 2014 Aug.

12.

Comparative population structure analysis of Campylobacter jejuni from human and poultry origin in Bangladesh.

Islam Z, van Belkum A, Wagenaar JA, Cody AJ, de Boer AG, Sarker SK, Jacobs BC, Talukder KA, Endtz HP.

Eur J Clin Microbiol Infect Dis. 2014 Dec;33(12):2173-81. doi: 10.1007/s10096-014-2184-x. Epub 2014 Jun 26.

PMID:
24962195
13.

Real-time genomic epidemiological evaluation of human Campylobacter isolates by use of whole-genome multilocus sequence typing.

Cody AJ, McCarthy ND, Jansen van Rensburg M, Isinkaye T, Bentley SD, Parkhill J, Dingle KE, Bowler IC, Jolley KA, Maiden MC.

J Clin Microbiol. 2013 Aug;51(8):2526-34. doi: 10.1128/JCM.00066-13. Epub 2013 May 22.

14.

A longitudinal 6-year study of the molecular epidemiology of clinical campylobacter isolates in Oxfordshire, United kingdom.

Cody AJ, McCarthy NM, Wimalarathna HL, Colles FM, Clark L, Bowler IC, Maiden MC, Dingle KE.

J Clin Microbiol. 2012 Oct;50(10):3193-201. doi: 10.1128/JCM.01086-12. Epub 2012 Jul 18.

15.

Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain.

Jolley KA, Bliss CM, Bennett JS, Bratcher HB, Brehony C, Colles FM, Wimalarathna H, Harrison OB, Sheppard SK, Cody AJ, Maiden MCJ.

Microbiology. 2012 Apr;158(Pt 4):1005-1015. doi: 10.1099/mic.0.055459-0. Epub 2012 Jan 27.

16.

Temporal variation and host association in the Campylobacter population in a longitudinal ruminant farm study.

Sproston EL, Ogden ID, MacRae M, Dallas JF, Sheppard SK, Cody AJ, Colles FM, Wilson MJ, Forbes KJ, Strachan NJ.

Appl Environ Microbiol. 2011 Sep;77(18):6579-86. doi: 10.1128/AEM.00428-11. Epub 2011 Jul 22.

17.

Ciprofloxacin-resistant campylobacteriosis in the UK.

Cody AJ, Clarke L, Bowler IC, Dingle KE.

Lancet. 2010 Dec 11;376(9757):1987. doi: 10.1016/S0140-6736(10)62261-1. No abstract available.

PMID:
21146103
18.

Host association of Campylobacter genotypes transcends geographic variation.

Sheppard SK, Colles F, Richardson J, Cody AJ, Elson R, Lawson A, Brick G, Meldrum R, Little CL, Owen RJ, Maiden MC, McCarthy ND.

Appl Environ Microbiol. 2010 Aug;76(15):5269-77. doi: 10.1128/AEM.00124-10. Epub 2010 Jun 4.

19.

Where does Campylobacter come from? A molecular odyssey.

Cody AJ, Colles FM, Sheppard SK, Maiden MC.

Adv Exp Med Biol. 2010;659:47-56. doi: 10.1007/978-1-4419-0981-7_4. Review. No abstract available.

20.

Typing of Campylobacter jejuni isolates from dogs by use of multilocus sequence typing and pulsed-field gel electrophoresis.

Parsons BN, Cody AJ, Porter CJ, Stavisky JH, Smith JL, Williams NJ, Leatherbarrow AJ, Hart CA, Gaskell RM, Dingle KE, Dawson S.

J Clin Microbiol. 2009 Nov;47(11):3466-71. doi: 10.1128/JCM.01046-09. Epub 2009 Sep 30.

21.

Comparative genotyping of Campylobacter jejuni strains from patients with Guillain-Barré syndrome in Bangladesh.

Islam Z, van Belkum A, Wagenaar JA, Cody AJ, de Boer AG, Tabor H, Jacobs BC, Talukder KA, Endtz HP.

PLoS One. 2009 Sep 30;4(9):e7257. doi: 10.1371/journal.pone.0007257.

22.

Campylobacter jejuni HS:23 and Guillain-Barre syndrome, Bangladesh.

Islam Z, van Belkum A, Cody AJ, Tabor H, Jacobs BC, Talukder KA, Endtz HP.

Emerg Infect Dis. 2009 Aug;15(8):1315-7. doi: 10.3201/eid1508.090120. No abstract available.

23.

Genetic diversity and stability of the porA allele as a genetic marker in human Campylobacter infection.

Cody AJ, Maiden MJC, Dingle KE.

Microbiology. 2009 Dec;155(Pt 12):4145-4154. doi: 10.1099/mic.0.031047-0. Epub 2009 Sep 10.

24.

Extended sequence typing of Campylobacter spp., United Kingdom.

Dingle KE, McCarthy ND, Cody AJ, Peto TE, Maiden MC.

Emerg Infect Dis. 2008 Oct;14(10):1620-2. doi: 10.3201/eid1410.071109.

25.

Campylobacter infection of broiler chickens in a free-range environment.

Colles FM, Jones TA, McCarthy ND, Sheppard SK, Cody AJ, Dingle KE, Dawkins MS, Maiden MC.

Environ Microbiol. 2008 Aug;10(8):2042-50. doi: 10.1111/j.1462-2920.2008.01623.x. Epub 2008 Apr 10.

26.

Comparison of Campylobacter populations in wild geese with those in starlings and free-range poultry on the same farm.

Colles FM, Dingle KE, Cody AJ, Maiden MC.

Appl Environ Microbiol. 2008 Jun;74(11):3583-90. doi: 10.1128/AEM.02491-07. Epub 2008 Apr 4.

27.

Use of multilocus sequence typing to investigate the association between the presence of Campylobacter spp. in broiler drinking water and Campylobacter colonization in broilers.

Ogden ID, MacRae M, Johnston M, Strachan NJ, Cody AJ, Dingle KE, Newell DG.

Appl Environ Microbiol. 2007 Aug;73(16):5125-9. Epub 2007 Jun 22.

28.

High rates of recombination in otitis media isolates of non-typeable Haemophilus influenzae.

Cody AJ, Field D, Feil EJ, Stringer S, Deadman ME, Tsolaki AG, Gratz B, Bouchet V, Goldstein R, Hood DW, Moxon ER.

Infect Genet Evol. 2003 May;3(1):57-66.

29.

Characterization of encapsulated and noncapsulated Haemophilus influenzae and determination of phylogenetic relationships by multilocus sequence typing.

Meats E, Feil EJ, Stringer S, Cody AJ, Goldstein R, Kroll JS, Popovic T, Spratt BG.

J Clin Microbiol. 2003 Apr;41(4):1623-36.

30.

The myeloid-specific sialic acid-binding receptor, CD33, associates with the protein-tyrosine phosphatases, SHP-1 and SHP-2.

Taylor VC, Buckley CD, Douglas M, Cody AJ, Simmons DL, Freeman SD.

J Biol Chem. 1999 Apr 23;274(17):11505-12.

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