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Items: 31

1.

Untargeted Molecular Discovery in Primary Metabolism: Collision Cross Section as a Molecular Descriptor in Ion Mobility-Mass Spectrometry.

Nichols CM, Dodds JN, Rose BS, Picache JA, Morris CB, Codreanu SG, May JC, Sherrod SD, McLean JA.

Anal Chem. 2018 Dec 18;90(24):14484-14492. doi: 10.1021/acs.analchem.8b04322. Epub 2018 Nov 30.

2.

An Integrated, High-Throughput Strategy for Multiomic Systems Level Analysis.

Gutierrez DB, Gant-Branum RL, Romer CE, Farrow MA, Allen JL, Dahal N, Nei YW, Codreanu SG, Jordan AT, Palmer LD, Sherrod SD, McLean JA, Skaar EP, Norris JL, Caprioli RM.

J Proteome Res. 2018 Oct 5;17(10):3396-3408. doi: 10.1021/acs.jproteome.8b00302. Epub 2018 Aug 30.

3.

Proteogenomic Analysis of Surgically Resected Lung Adenocarcinoma.

Sharpnack MF, Ranbaduge N, Srivastava A, Cerciello F, Codreanu SG, Liebler DC, Mascaux C, Miles WO, Morris R, McDermott JE, Sharpnack JL, Amann J, Maher CA, Machiraju R, Wysocki VH, Govindan R, Mallick P, Coombes KR, Huang K, Carbone DP.

J Thorac Oncol. 2018 Oct;13(10):1519-1529. doi: 10.1016/j.jtho.2018.06.025. Epub 2018 Jul 11.

4.

Neuronal Preconditioning Requires the Mitophagic Activity of C-terminus of HSC70-Interacting Protein.

Lizama BN, Palubinsky AM, Raveendran VA, Moore AM, Federspiel JD, Codreanu SG, Liebler DC, McLaughlin B.

J Neurosci. 2018 Aug 1;38(31):6825-6840. doi: 10.1523/JNEUROSCI.0699-18.2018. Epub 2018 Jun 22.

5.

Global untargeted serum metabolomic analyses nominate metabolic pathways responsive to loss of expression of the orphan metallo β-lactamase, MBLAC1.

Gibson CL, Codreanu SG, Schrimpe-Rutledge AC, Retzlaff CL, Wright J, Mortlock DP, Sherrod SD, McLean JA, Blakely RD.

Mol Omics. 2018 Jun 12;14(3):142-155. doi: 10.1039/c7mo00022g.

6.

Engineered microfluidic bioreactor for examining the three-dimensional breast tumor microenvironment.

Rogers M, Sobolik T, Schaffer DK, Samson PC, Johnson AC, Owens P, Codreanu SG, Sherrod SD, McLean JA, Wikswo JP, Richmond A.

Biomicrofluidics. 2018 May 7;12(3):034102. doi: 10.1063/1.5016433. eCollection 2018 May.

7.

Detection of Proteome Diversity Resulted from Alternative Splicing is Limited by Trypsin Cleavage Specificity.

Wang X, Codreanu SG, Wen B, Li K, Chambers MC, Liebler DC, Zhang B.

Mol Cell Proteomics. 2018 Mar;17(3):422-430. doi: 10.1074/mcp.RA117.000155. Epub 2017 Dec 8.

8.

Identification of Proteomic Features To Distinguish Benign Pulmonary Nodules from Lung Adenocarcinoma.

Codreanu SG, Hoeksema MD, Slebos RJC, Zimmerman LJ, Rahman SMJ, Li M, Chen SC, Chen H, Eisenberg R, Liebler DC, Massion PP.

J Proteome Res. 2017 Sep 1;16(9):3266-3276. doi: 10.1021/acs.jproteome.7b00245. Epub 2017 Aug 8.

9.

Metabolic consequences of inflammatory disruption of the blood-brain barrier in an organ-on-chip model of the human neurovascular unit.

Brown JA, Codreanu SG, Shi M, Sherrod SD, Markov DA, Neely MD, Britt CM, Hoilett OS, Reiserer RS, Samson PC, McCawley LJ, Webb DJ, Bowman AB, McLean JA, Wikswo JP.

J Neuroinflammation. 2016 Dec 12;13(1):306.

10.

Untargeted Metabolomics Strategies-Challenges and Emerging Directions.

Schrimpe-Rutledge AC, Codreanu SG, Sherrod SD, McLean JA.

J Am Soc Mass Spectrom. 2016 Dec;27(12):1897-1905. Epub 2016 Sep 13. Review.

11.

Specificity of Protein Covalent Modification by the Electrophilic Proteasome Inhibitor Carfilzomib in Human Cells.

Federspiel JD, Codreanu SG, Goyal S, Albertolle ME, Lowe E, Teague J, Wong H, Guengerich FP, Liebler DC.

Mol Cell Proteomics. 2016 Oct;15(10):3233-3242. Epub 2016 Aug 8.

12.

Assembly Dynamics and Stoichiometry of the Apoptosis Signal-regulating Kinase (ASK) Signalosome in Response to Electrophile Stress.

Federspiel JD, Codreanu SG, Palubinsky AM, Winland AJ, Betanzos CM, McLaughlin B, Liebler DC.

Mol Cell Proteomics. 2016 Jun;15(6):1947-61. doi: 10.1074/mcp.M115.057364. Epub 2016 Mar 22.

13.

Novel approaches to identify protein adducts produced by lipid peroxidation.

Codreanu SG, Liebler DC.

Free Radic Res. 2015;49(7):881-7. doi: 10.3109/10715762.2015.1019348. Epub 2015 Mar 30. Review.

14.

CHIP Is an Essential Determinant of Neuronal Mitochondrial Stress Signaling.

Palubinsky AM, Stankowski JN, Kale AC, Codreanu SG, Singer RJ, Liebler DC, Stanwood GD, McLaughlin B.

Antioxid Redox Signal. 2015 Aug 20;23(6):535-49. doi: 10.1089/ars.2014.6102. Epub 2015 Mar 18.

15.

Alkylation damage by lipid electrophiles targets functional protein systems.

Codreanu SG, Ullery JC, Zhu J, Tallman KA, Beavers WN, Porter NA, Marnett LJ, Zhang B, Liebler DC.

Mol Cell Proteomics. 2014 Mar;13(3):849-59. doi: 10.1074/mcp.M113.032953. Epub 2014 Jan 15.

16.

Targeted protein capture for analysis of electrophile-protein adducts.

Connor RE, Codreanu SG, Marnett LJ, Liebler DC.

Methods Mol Biol. 2013;987:163-76. doi: 10.1007/978-1-62703-321-3_15.

17.

Biotinylated probes for the analysis of protein modification by electrophiles.

Codreanu SG, Kim HY, Porter NA, Liebler DC.

Methods Mol Biol. 2012;803:77-95. doi: 10.1007/978-1-61779-364-6_7.

18.

Mechlorethamine-induced DNA-protein cross-linking in human fibrosarcoma (HT1080) cells.

Michaelson-Richie ED, Ming X, Codreanu SG, Loeber RL, Liebler DC, Campbell C, Tretyakova NY.

J Proteome Res. 2011 Jun 3;10(6):2785-96. doi: 10.1021/pr200042u. Epub 2011 Apr 29.

19.

Sequence tagging reveals unexpected modifications in toxicoproteomics.

Dasari S, Chambers MC, Codreanu SG, Liebler DC, Collins BC, Pennington SR, Gallagher WM, Tabb DL.

Chem Res Toxicol. 2011 Feb 18;24(2):204-16. doi: 10.1021/tx100275t. Epub 2011 Jan 7.

20.

DNA-protein cross-linking by 1,2,3,4-diepoxybutane.

Michaelson-Richie ED, Loeber RL, Codreanu SG, Ming X, Liebler DC, Campbell C, Tretyakova NY.

J Proteome Res. 2010 Sep 3;9(9):4356-67. doi: 10.1021/pr1000835.

21.

Use of dimedone-based chemical probes for sulfenic acid detection methods to visualize and identify labeled proteins.

Nelson KJ, Klomsiri C, Codreanu SG, Soito L, Liebler DC, Rogers LC, Daniel LW, Poole LB.

Methods Enzymol. 2010;473:95-115. doi: 10.1016/S0076-6879(10)73004-4. Review.

22.

Proteomic analysis of DNA-protein cross-linking by antitumor nitrogen mustards.

Loeber RL, Michaelson-Richie ED, Codreanu SG, Liebler DC, Campbell CR, Tretyakova NY.

Chem Res Toxicol. 2009 Jun;22(6):1151-62. doi: 10.1021/tx900078y. Erratum in: Chem Res Toxicol. 2010 Aug 16;23(8):1427.

23.

Global analysis of protein damage by the lipid electrophile 4-hydroxy-2-nonenal.

Codreanu SG, Zhang B, Sobecki SM, Billheimer DD, Liebler DC.

Mol Cell Proteomics. 2009 Apr;8(4):670-80. doi: 10.1074/mcp.M800070-MCP200. Epub 2008 Dec 2.

24.

2-Hydroxychromene-2-carboxylic acid isomerase: a kappa class glutathione transferase from Pseudomonas putida.

Thompson LC, Ladner JE, Codreanu SG, Harp J, Gilliland GL, Armstrong RN.

Biochemistry. 2007 Jun 12;46(23):6710-22. Epub 2007 May 18.

PMID:
17508726
25.

Inhibition of protein phosphatase 2A activity by selective electrophile alkylation damage.

Codreanu SG, Adams DG, Dawson ES, Wadzinski BE, Liebler DC.

Biochemistry. 2006 Aug 22;45(33):10020-9.

PMID:
16906760
26.

Influence of the dimer interface on glutathione transferase structure and dynamics revealed by amide H/D exchange mass spectrometry.

Codreanu SG, Thompson LC, Hachey DL, Dirr HW, Armstrong RN.

Biochemistry. 2005 Aug 9;44(31):10605-12.

PMID:
16060669
27.

Sample preparation and digestion for proteomic analyses using spin filters.

Manza LL, Stamer SL, Ham AJ, Codreanu SG, Liebler DC.

Proteomics. 2005 May;5(7):1742-5.

PMID:
15761957
28.

Global shifts in protein sumoylation in response to electrophile and oxidative stress.

Manza LL, Codreanu SG, Stamer SL, Smith DL, Wells KS, Roberts RL, Liebler DC.

Chem Res Toxicol. 2004 Dec;17(12):1706-15.

PMID:
15606148
29.

Stress sensor triggers conformational response of the integral membrane protein microsomal glutathione transferase 1.

Busenlehner LS, Codreanu SG, Holm PJ, Bhakat P, Hebert H, Morgenstern R, Armstrong RN.

Biochemistry. 2004 Sep 7;43(35):11145-52.

PMID:
15366924
30.

Local protein dynamics and catalysis: detection of segmental motion associated with rate-limiting product release by a glutathione transferase.

Codreanu SG, Ladner JE, Xiao G, Stourman NV, Hachey DL, Gilliland GL, Armstrong RN.

Biochemistry. 2002 Dec 24;41(51):15161-72.

PMID:
12484753
31.

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