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Items: 15


Gene Balance Predicts Transcriptional Responses Immediately Following Ploidy Change in Arabidopsis thaliana.

Song MJ, Potter B, Doyle JJ, Coate JE.

Plant Cell. 2020 Mar 17. pii: tpc.00832.2019. doi: 10.1105/tpc.19.00832. [Epub ahead of print]


Robust Cytonuclear Coordination of Transcription in Nascent Arabidopsis thaliana Autopolyploids.

Coate JE, Schreyer WM, Kum D, Doyle JJ.

Genes (Basel). 2020 Jan 28;11(2). pii: E134. doi: 10.3390/genes11020134.


Ploidy and Size at Multiple Scales in the Arabidopsis Sepal.

Robinson DO, Coate JE, Singh A, Hong L, Bush M, Doyle JJ, Roeder AHK.

Plant Cell. 2018 Oct;30(10):2308-2329. doi: 10.1105/tpc.18.00344. Epub 2018 Aug 24.


Expression-level support for gene dosage sensitivity in three Glycine subgenus Glycine polyploids and their diploid progenitors.

Coate JE, Song MJ, Bombarely A, Doyle JJ.

New Phytol. 2016 Dec;212(4):1083-1093. doi: 10.1111/nph.14090. Epub 2016 Jul 15.


Variation in transcriptome size: are we getting the message?

Coate JE, Doyle JJ.

Chromosoma. 2015 Mar;124(1):27-43. doi: 10.1007/s00412-014-0496-3. Epub 2014 Nov 26. Review.


The wild side of a major crop: soybean's perennial cousins from Down Under.

Sherman-Broyles S, Bombarely A, Powell AF, Doyle JL, Egan AN, Coate JE, Doyle JJ.

Am J Bot. 2014 Oct;101(10):1651-65. doi: 10.3732/ajb.1400121. Epub 2014 Sep 8. Review.


The legacy of diploid progenitors in allopolyploid gene expression patterns.

Buggs RJ, Wendel JF, Doyle JJ, Soltis DE, Soltis PS, Coate JE.

Philos Trans R Soc Lond B Biol Sci. 2014 Aug 5;369(1648). pii: 20130354. doi: 10.1098/rstb.2013.0354. Review.


Mining transcriptomic data to study the origins and evolution of a plant allopolyploid complex.

Bombarely A, Coate JE, Doyle JJ.

PeerJ. 2014 May 20;2:e391. doi: 10.7717/peerj.391. eCollection 2014.


Extensive translational regulation of gene expression in an allopolyploid (Glycine dolichocarpa).

Coate JE, Bar H, Doyle JJ.

Plant Cell. 2014 Jan;26(1):136-50. doi: 10.1105/tpc.113.119966. Epub 2014 Jan 31.


Transgressive physiological and transcriptomic responses to light stress in allopolyploid Glycine dolichocarpa (Leguminosae).

Coate JE, Powell AF, Owens TG, Doyle JJ.

Heredity (Edinb). 2013 Feb;110(2):160-70. doi: 10.1038/hdy.2012.77. Epub 2012 Nov 14.


A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species.

Ilut DC, Coate JE, Luciano AK, Owens TG, May GD, Farmer A, Doyle JJ.

Am J Bot. 2012 Feb;99(2):383-96. doi: 10.3732/ajb.1100312. Epub 2012 Feb 1.


Anatomical, biochemical, and photosynthetic responses to recent allopolyploidy in Glycine dolichocarpa (Fabaceae).

Coate JE, Luciano AK, Seralathan V, Minchew KJ, Owens TG, Doyle JJ.

Am J Bot. 2012 Jan;99(1):55-67. doi: 10.3732/ajb.1100465. Epub 2011 Dec 30.


Divergent evolutionary fates of major photosynthetic gene networks following gene and whole genome duplications.

Coate JE, Doyle JJ.

Plant Signal Behav. 2011 Apr;6(4):594-7. Epub 2011 Apr 1. Review.


Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication.

Coate JE, Schlueter JA, Whaley AM, Doyle JJ.

Plant Physiol. 2011 Apr;155(4):2081-95. doi: 10.1104/pp.110.169599. Epub 2011 Feb 2.


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