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Items: 1 to 50 of 120

1.

Barley landraces are characterized by geographically heterogeneous genomic origins.

Poets AM, Fang Z, Clegg MT, Morrell PL.

Genome Biol. 2015 Aug 21;16:173. doi: 10.1186/s13059-015-0712-3.

2.

Two genomic regions contribute disproportionately to geographic differentiation in wild barley.

Fang Z, Gonzales AM, Clegg MT, Smith KP, Muehlbauer GJ, Steffenson BJ, Morrell PL.

G3 (Bethesda). 2014 Apr 22;4(7):1193-203. doi: 10.1534/g3.114.010561.

3.

Resequencing data indicate a modest effect of domestication on diversity in barley: a cultigen with multiple origins.

Morrell PL, Gonzales AM, Meyer KK, Clegg MT.

J Hered. 2014 Mar-Apr;105(2):253-64. doi: 10.1093/jhered/est083. Epub 2013 Dec 11.

PMID:
24336926
4.

Tracing the geographic origins of weedy Ipomoea purpurea in the southeastern United States.

Fang Z, Gonzales AM, Durbin ML, Meyer KK, Miller BH, Volz KM, Clegg MT, Morrell PL.

J Hered. 2013 Sep-Oct;104(5):666-77. doi: 10.1093/jhered/est046. Epub 2013 Jul 26.

5.

Nucleotide sequence diversity of floral pigment genes in Mexican populations of Ipomoea purpurea (morning glory) accord with a neutral model of evolution.

Gonzales AM, Fang Z, Durbin ML, Meyer KK, Clegg MT, Morrell PL.

J Hered. 2012 Nov-Dec;103(6):863-72. doi: 10.1093/jhered/ess059. Epub 2012 Oct 22.

PMID:
23091224
6.

Allele-specific PCR can improve the efficiency of experimental resolution of heterozygotes in resequencing studies.

Chen H, Morrell PL, Toleno DM, Lundy KE, Clegg MT.

Mol Ecol Resour. 2010 Jul;10(4):647-58. doi: 10.1111/j.1755-0998.2009.02804.x. Epub 2009 Dec 21.

PMID:
21565069
7.

Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes.

Akhunov ED, Akhunova AR, Anderson OD, Anderson JA, Blake N, Clegg MT, Coleman-Derr D, Conley EJ, Crossman CC, Deal KR, Dubcovsky J, Gill BS, Gu YQ, Hadam J, Heo H, Huo N, Lazo GR, Luo MC, Ma YQ, Matthews DE, McGuire PE, Morrell PL, Qualset CO, Renfro J, Tabanao D, Talbert LE, Tian C, Toleno DM, Warburton ML, You FM, Zhang W, Dvorak J.

BMC Genomics. 2010 Dec 14;11:702. doi: 10.1186/1471-2164-11-702.

8.

Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae.

Luo MC, Deal KR, Akhunov ED, Akhunova AR, Anderson OD, Anderson JA, Blake N, Clegg MT, Coleman-Derr D, Conley EJ, Crossman CC, Dubcovsky J, Gill BS, Gu YQ, Hadam J, Heo HY, Huo N, Lazo G, Ma Y, Matthews DE, McGuire PE, Morrell PL, Qualset CO, Renfro J, Tabanao D, Talbert LE, Tian C, Toleno DM, Warburton ML, You FM, Zhang W, Dvorak J.

Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15780-5. doi: 10.1073/pnas.0908195106. Epub 2009 Aug 26.

9.

U.S.-Cuban scientific relations.

Pastrana SJ, Clegg MT.

Science. 2008 Oct 17;322(5900):345. doi: 10.1126/science.1162561. No abstract available.

10.

Tracing the geographic origins of major avocado cultivars.

Chen H, Morrell PL, Ashworth VE, de la Cruz M, Clegg MT.

J Hered. 2009 Jan-Feb;100(1):56-65. doi: 10.1093/jhered/esn068. Epub 2008 Sep 8.

PMID:
18779226
11.

Persea americana (avocado): bringing ancient flowers to fruit in the genomics era.

Chanderbali AS, Albert VA, Ashworth VE, Clegg MT, Litz RE, Soltis DE, Soltis PS.

Bioessays. 2008 Apr;30(4):386-96. doi: 10.1002/bies.20721.

PMID:
18348249
12.

Nucleotide diversity and linkage disequilibrium in wild avocado (Persea americana Mill.).

Chen H, Morrell PL, de la Cruz M, Clegg MT.

J Hered. 2008 Jul-Aug;99(4):382-9. doi: 10.1093/jhered/esn016. Epub 2008 Mar 14.

PMID:
18343895
13.

Error detection in SNP data by considering the likelihood of recombinational history implied by three-site combinations.

Toleno DM, Morrell PL, Clegg MT.

Bioinformatics. 2007 Jul 15;23(14):1807-14. Epub 2007 May 17.

PMID:
17510172
14.

Genetic evidence for a second domestication of barley (Hordeum vulgare) east of the Fertile Crescent.

Morrell PL, Clegg MT.

Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3289-94. Epub 2007 Feb 21.

15.

Estimating the contribution of mutation, recombination and gene conversion in the generation of haplotypic diversity.

Morrell PL, Toleno DM, Lundy KE, Clegg MT.

Genetics. 2006 Jul;173(3):1705-23. Epub 2006 Apr 19.

16.

Low levels of linkage disequilibrium in wild barley (Hordeum vulgare ssp. spontaneum) despite high rates of self-fertilization.

Morrell PL, Toleno DM, Lundy KE, Clegg MT.

Proc Natl Acad Sci U S A. 2005 Feb 15;102(7):2442-7. Epub 2005 Feb 7.

18.

Genes that determine flower color: the role of regulatory changes in the evolution of phenotypic adaptations.

Durbin ML, Lundy KE, Morrell PL, Torres-Martinez CL, Clegg MT.

Mol Phylogenet Evol. 2003 Dec;29(3):507-18.

PMID:
14615189
19.
20.

Distinct geographic patterns of genetic diversity are maintained in wild barley (Hordeum vulgare ssp. spontaneum) despite migration.

Morrell PL, Lundy KE, Clegg MT.

Proc Natl Acad Sci U S A. 2003 Sep 16;100(19):10812-7. Epub 2003 Sep 8.

22.

Tracing floral adaptations from ecology to molecules.

Clegg MT, Durbin ML.

Nat Rev Genet. 2003 Mar;4(3):206-15. Review.

PMID:
12610525
24.

Dynamics of mobile element activity in chalcone synthase loci in the common morning glory (Ipomoea purpurea).

Durbin ML, Denton AL, Clegg MT.

Proc Natl Acad Sci U S A. 2001 Apr 24;98(9):5084-9. Epub 2001 Apr 17.

25.
26.

Variation and evolution in plants and microorganisms: toward a new synthesis 50 years after Stebbins.

Ayala FJ, Fitch WM, Clegg MT.

Proc Natl Acad Sci U S A. 2000 Jun 20;97(13):6941-4. No abstract available.

27.

Flower color variation: a model for the experimental study of evolution.

Clegg MT, Durbin ML.

Proc Natl Acad Sci U S A. 2000 Jun 20;97(13):7016-23.

28.

Comparative genomics of chalcone synthase and Myb genes in the grass family.

Oberholzer V, Durbin ML, Clegg MT.

Genes Genet Syst. 2000 Feb;75(1):1-16.

29.

Molecular evolution of the chalcone synthase multigene family in the morning glory genome.

Durbin ML, McCaig B, Clegg MT.

Plant Mol Biol. 2000 Jan;42(1):79-92. Review.

PMID:
10688131
30.

Patterns of genetic diversification within the Adh gene family in the grasses (Poaceae).

Gaut BS, Peek AS, Morton BR, Clegg MT.

Mol Biol Evol. 1999 Aug;16(8):1086-97.

PMID:
10474904
32.
33.

The evolution of plant nuclear genes.

Clegg MT, Cummings MP, Durbin ML.

Proc Natl Acad Sci U S A. 1997 Jul 22;94(15):7791-8.

35.

Evolution of alcohol dehydrogenase genes in the palm and grass families.

Morton BR, Gaut BS, Clegg MT.

Proc Natl Acad Sci U S A. 1996 Oct 15;93(21):11735-9.

36.
37.
38.

Evolution of the chalcone synthase gene family in the genus Ipomoea.

Durbin ML, Learn GH Jr, Huttley GA, Clegg MT.

Proc Natl Acad Sci U S A. 1995 Apr 11;92(8):3338-42.

39.
40.

Rates and patterns of chloroplast DNA evolution.

Clegg MT, Gaut BS, Learn GH Jr, Morton BR.

Proc Natl Acad Sci U S A. 1994 Jul 19;91(15):6795-801. Review.

42.

Genomes and evolution.

O'Brien SJ, Clegg MT.

Curr Opin Genet Dev. 1993 Dec;3(6):835-6. No abstract available.

PMID:
8118206
43.
44.
45.

Molecular evolution of the Adh1 locus in the genus Zea.

Gaut BS, Clegg MT.

Proc Natl Acad Sci U S A. 1993 Jun 1;90(11):5095-9.

46.

Relative rates of nucleotide substitution in the chloroplast genome.

Gaut BS, Muse SV, Clegg MT.

Mol Phylogenet Evol. 1993 Jun;2(2):89-96. Erratum in: Mol Phylogenet Evol 1994 Jun;3(2):185. Mol Phylogenet Evol 1994 Mar;3(1):83.

PMID:
8043149
47.

Phylogenetic analysis of rbcL sequences identifies Acorus calamus as the primal extant monocotyledon.

Duvall MR, Learn GH Jr, Eguiarte LE, Clegg MT.

Proc Natl Acad Sci U S A. 1993 May 15;90(10):4641-4.

48.

Evolution of a noncoding region of the chloroplast genome.

Golenberg EM, Clegg MT, Durbin ML, Doebley J, Ma DP.

Mol Phylogenet Evol. 1993 Mar;2(1):52-64.

PMID:
8081547
49.

Chloroplast gene sequences and the study of plant evolution.

Clegg MT.

Proc Natl Acad Sci U S A. 1993 Jan 15;90(2):363-7. Review.

50.

Relative rates of nucleotide substitution at the rbcL locus of monocotyledonous plants.

Gaut BS, Muse SV, Clark WD, Clegg MT.

J Mol Evol. 1992 Oct;35(4):292-303.

PMID:
1404415

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