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Items: 1 to 50 of 103

1.

Introducing SPeDE: High-Throughput Dereplication and Accurate Determination of Microbial Diversity from Matrix-Assisted Laser Desorption-Ionization Time of Flight Mass Spectrometry Data.

Dumolin C, Aerts M, Verheyde B, Schellaert S, Vandamme T, Van der Jeugt F, De Canck E, Cnockaert M, Wieme AD, Cleenwerck I, Peiren J, Dawyndt P, Vandamme P, Carlier A.

mSystems. 2019 Sep 10;4(5). pii: e00437-19. doi: 10.1128/mSystems.00437-19.

2.

Actinomadura roseirufa sp. nov., producer of semduramicin, a polyether ionophore.

Wieme AD, Gosselé F, Snauwaert C, Cleenwerck I, Vandamme P.

Int J Syst Evol Microbiol. 2019 Jul 16. doi: 10.1099/ijsem.0.003591. [Epub ahead of print]

PMID:
31310199
4.

Arcobacter haliotis sp. nov., isolated from abalone species Haliotis gigantea.

Tanaka R, Cleenwerck I, Mizutani Y, Iehata S, Bossier P, Vandamme P.

Int J Syst Evol Microbiol. 2017 Aug;67(8):3050-3056. doi: 10.1099/ijsem.0.002080. Epub 2017 Aug 18.

PMID:
28820118
5.

Paenibacillus aquistagni sp. nov., isolated from an artificial lake accumulating industrial wastewater.

Simon L, Škraban J, Kyrpides NC, Woyke T, Shapiro N, Cleenwerck I, Vandamme P, Whitman WB, Trček J.

Antonie Van Leeuwenhoek. 2017 Sep;110(9):1189-1197. doi: 10.1007/s10482-017-0891-x. Epub 2017 May 29.

PMID:
28555445
7.

Whole-Genome Sequence Analysis of Bombella intestini LMG 28161T, a Novel Acetic Acid Bacterium Isolated from the Crop of a Red-Tailed Bumble Bee, Bombus lapidarius.

Li L, Illeghems K, Van Kerrebroeck S, Borremans W, Cleenwerck I, Smagghe G, De Vuyst L, Vandamme P.

PLoS One. 2016 Nov 16;11(11):e0165611. doi: 10.1371/journal.pone.0165611. eCollection 2016.

8.

Cellulose synthesis by Komagataeibacter rhaeticus strain P 1463 isolated from Kombucha.

Semjonovs P, Ruklisha M, Paegle L, Saka M, Treimane R, Skute M, Rozenberga L, Vikele L, Sabovics M, Cleenwerck I.

Appl Microbiol Biotechnol. 2017 Feb;101(3):1003-1012. doi: 10.1007/s00253-016-7761-8. Epub 2016 Sep 27.

PMID:
27678116
9.

Reclassification of Pseudomonas sp. PB-6250T as Lysobacter firmicutimachus sp. nov.

Miess H, van Trappen S, Cleenwerck I, De Vos P, Gross H.

Int J Syst Evol Microbiol. 2016 Oct;66(10):4162-4166. doi: 10.1099/ijsem.0.001329. Epub 2016 Jul 27.

PMID:
27468934
10.

Erwinia gerundensis sp. nov., a cosmopolitan epiphyte originally isolated from pome fruit trees.

Rezzonico F, Smits THM, Born Y, Blom J, Frey JE, Goesmann A, Cleenwerck I, de Vos P, Bonaterra A, Duffy B, Montesinos E.

Int J Syst Evol Microbiol. 2016 Mar;66(3):1583-1592. doi: 10.1099/ijsem.0.000920. Epub 2016 Jan 26.

PMID:
26813696
11.

Production of extracellular fructans by Gluconobacter nephelii P1464.

Semjonovs P, Shakirova L, Treimane R, Shvirksts K, Auzina L, Cleenwerck I, Zikmanis P.

Lett Appl Microbiol. 2016 Feb;62(2):145-52. doi: 10.1111/lam.12521.

12.

Formosa haliotis sp. nov., a brown-alga-degrading bacterium isolated from the gut of the abalone Haliotis gigantea.

Tanaka R, Cleenwerck I, Mizutani Y, Iehata S, Shibata T, Miyake H, Mori T, Tamaru Y, Ueda M, Bossier P, Vandamme P.

Int J Syst Evol Microbiol. 2015 Dec;65(12):4388-93. doi: 10.1099/ijsem.0.000586. Epub 2015 Sep 8.

PMID:
26354496
13.

Characterization of a novel clade of Xanthomonas isolated from rice leaves in Mali and proposal of Xanthomonas maliensis sp. nov.

Triplett LR, Verdier V, Campillo T, Van Malderghem C, Cleenwerck I, Maes M, Deblais L, Corral R, Koita O, Cottyn B, Leach JE.

Antonie Van Leeuwenhoek. 2015 Apr;107(4):869-81. doi: 10.1007/s10482-015-0379-5. Epub 2015 Jan 15.

PMID:
25588569
14.

Bombella intestini gen. nov., sp. nov., an acetic acid bacterium isolated from bumble bee crop.

Li L, Praet J, Borremans W, Nunes OC, Manaia CM, Cleenwerck I, Meeus I, Smagghe G, De Vuyst L, Vandamme P.

Int J Syst Evol Microbiol. 2015 Jan;65(Pt 1):267-73. doi: 10.1099/ijs.0.068049-0. Epub 2014 Oct 21.

PMID:
25336723
15.

Thiouracil-Forming Bacteria Identified and Characterized upon Porcine In Vitro Digestion of Brassicaceae Feed.

Kiebooms JA, Wauters J, Vanden Bussche J, Houf K, De Vos P, Van Trappen S, Cleenwerck I, Vanhaecke L.

Appl Environ Microbiol. 2014 Dec;80(23):7433-42. doi: 10.1128/AEM.02370-14. Epub 2014 Sep 26.

16.

Photobacterium piscicola sp. nov., isolated from marine fish and spoiled packed cod.

Figge MJ, Cleenwerck I, van Uijen A, De Vos P, Huys G, Robertson L.

Syst Appl Microbiol. 2014 Jul;37(5):329-35. doi: 10.1016/j.syapm.2014.05.003. Epub 2014 May 27. Erratum in: Syst Appl Microbiol. 2014 Oct;37(7):541-2.

PMID:
24951451
18.

Acetobacter sicerae sp. nov., isolated from cider and kefir, and identification of species of the genus Acetobacter by dnaK, groEL and rpoB sequence analysis.

Li L, Wieme A, Spitaels F, Balzarini T, Nunes OC, Manaia CM, Van Landschoot A, De Vuyst L, Cleenwerck I, Vandamme P.

Int J Syst Evol Microbiol. 2014 Jul;64(Pt 7):2407-15. doi: 10.1099/ijs.0.058354-0. Epub 2014 Apr 24.

PMID:
24763601
19.

A Canker Disease of Populus × euramericana in China Caused by Lonsdalea quercina subsp. populi.

Li Y, He W, Ren F, Guo L, Chang J, Cleenwerck I, Ma Y, Wang H.

Plant Dis. 2014 Mar;98(3):368-378. doi: 10.1094/PDIS-01-13-0115-RE.

PMID:
30708441
20.

Gluconobacter cerevisiae sp. nov., isolated from the brewery environment.

Spitaels F, Wieme A, Balzarini T, Cleenwerck I, Van Landschoot A, De Vuyst L, Vandamme P.

Int J Syst Evol Microbiol. 2014 Apr;64(Pt 4):1134-41. doi: 10.1099/ijs.0.059311-0. Epub 2013 Dec 24.

PMID:
24368694
21.

Acetobacter lambici sp. nov., isolated from fermenting lambic beer.

Spitaels F, Li L, Wieme A, Balzarini T, Cleenwerck I, Van Landschoot A, De Vuyst L, Vandamme P.

Int J Syst Evol Microbiol. 2014 Apr;64(Pt 4):1083-9. doi: 10.1099/ijs.0.057315-0. Epub 2013 Dec 20.

PMID:
24363299
22.

Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum).

van der Wolf JM, Nijhuis EH, Kowalewska MJ, Saddler GS, Parkinson N, Elphinstone JG, Pritchard L, Toth IK, Lojkowska E, Potrykus M, Waleron M, de Vos P, Cleenwerck I, Pirhonen M, Garlant L, Hélias V, Pothier JF, Pflüger V, Duffy B, Tsror L, Manulis S.

Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):768-74. doi: 10.1099/ijs.0.052944-0. Epub 2013 Nov 13.

PMID:
24225027
23.

Detection and characterization of Bifidobacterium crudilactis and B. mongoliense able to grow during the manufacturing process of French raw milk cheeses.

Delcenserie V, Taminiau B, Gavini F, de Schaetzen MA, Cleenwerck I, Theves M, Mahieu M, Daube G.

BMC Microbiol. 2013 Oct 29;13:239. doi: 10.1186/1471-2180-13-239.

24.

Arenicella chitinivorans sp. nov., a gammaproteobacterium isolated from the sea urchin Strongylocentrotus intermedius.

Nedashkovskaya OI, Cleenwerck I, Zhukova NV, Kim SB, de Vos P.

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4124-9. doi: 10.1099/ijs.0.051599-0. Epub 2013 Jun 14.

PMID:
23771619
25.

Streptococcus rubneri sp. nov., isolated from the human throat.

Huch M, De Bruyne K, Cleenwerck I, Bub A, Cho GS, Watzl B, Snauwaert I, Franz CM, Vandamme P.

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4026-32. doi: 10.1099/ijs.0.048538-0. Epub 2013 Jun 7.

PMID:
23749274
26.

Pseudomonas asturiensis sp. nov., isolated from soybean and weeds.

González AJ, Cleenwerck I, De Vos P, Fernández-Sanz AM.

Syst Appl Microbiol. 2013 Jul;36(5):320-4. doi: 10.1016/j.syapm.2013.04.004. Epub 2013 May 30.

PMID:
23727430
28.

Gluconacetobacter maltaceti sp. nov., a novel vinegar producing acetic acid bacterium.

Slapšak N, Cleenwerck I, De Vos P, Trček J.

Syst Appl Microbiol. 2013 Feb;36(1):17-21. doi: 10.1016/j.syapm.2012.11.001. Epub 2012 Dec 27.

PMID:
23273842
29.

Pediococcus lolii DSM 19927T and JCM 15055T are strains of Pediococcus acidilactici.

Wieme A, Cleenwerck I, Van Landschoot A, Vandamme P.

Int J Syst Evol Microbiol. 2012 Dec;62(Pt 12):3105-8. doi: 10.1099/ijs.0.046201-0.

PMID:
23225319
30.

Mesorhizobium shonense sp. nov., Mesorhizobium hawassense sp. nov. and Mesorhizobium abyssinicae sp. nov., isolated from root nodules of different agroforestry legume trees.

Degefu T, Wolde-Meskel E, Liu B, Cleenwerck I, Willems A, Frostegård Å.

Int J Syst Evol Microbiol. 2013 May;63(Pt 5):1746-53. doi: 10.1099/ijs.0.044032-0. Epub 2012 Aug 31.

PMID:
22941297
31.

Gluconacetobacter medellinensis sp. nov., cellulose- and non-cellulose-producing acetic acid bacteria isolated from vinegar.

Castro C, Cleenwerck I, Trcek J, Zuluaga R, De Vos P, Caro G, Aguirre R, Putaux JL, Gañán P.

Int J Syst Evol Microbiol. 2013 Mar;63(Pt 3):1119-25. doi: 10.1099/ijs.0.043414-0. Epub 2012 Jun 22.

PMID:
22729025
32.

Brenneria goodwinii sp. nov., associated with acute oak decline in the UK.

Denman S, Brady C, Kirk S, Cleenwerck I, Venter S, Coutinho T, De Vos P.

Int J Syst Evol Microbiol. 2012 Oct;62(Pt 10):2451-6. doi: 10.1099/ijs.0.037879-0. Epub 2011 Nov 25.

PMID:
22140177
34.

Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus.

Brady CL, Cleenwerck I, van der Westhuizen L, Venter SN, Coutinho TA, De Vos P.

Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1457-64. doi: 10.1099/ijs.0.032615-0. Epub 2011 Aug 12.

PMID:
21841003
35.

Enterococcus ureasiticus sp. nov. and Enterococcus quebecensis sp. nov., isolated from water.

Sistek V, Maheux AF, Boissinot M, Bernard KA, Cantin P, Cleenwerck I, De Vos P, Bergeron MG.

Int J Syst Evol Microbiol. 2012 Jun;62(Pt 6):1314-20. doi: 10.1099/ijs.0.029033-0. Epub 2011 Jul 25.

PMID:
21788227
36.

Actinobaculum schaalii causing Fournier's gangrene.

Vanden Bempt I, Van Trappen S, Cleenwerck I, De Vos P, Camps K, Celens A, Van De Vyvere M.

J Clin Microbiol. 2011 Jun;49(6):2369-71. doi: 10.1128/JCM.00272-11. Epub 2011 Apr 20.

37.

Helicobacter heilmannii sp. nov., isolated from feline gastric mucosa.

Smet A, Flahou B, D'Herde K, Vandamme P, Cleenwerck I, Ducatelle R, Pasmans F, Haesebrouck F.

Int J Syst Evol Microbiol. 2012 Feb;62(Pt 2):299-306. doi: 10.1099/ijs.0.029207-0. Epub 2011 Mar 18. Erratum in: Int J Syst Evol Microbiol. 2012 Apr;62(Pt 4):1016.

PMID:
21421932
38.
39.

Vibrio variabilis sp. nov. and Vibrio maritimus sp. nov., isolated from Palythoa caribaeorum.

Chimetto LA, Cleenwerck I, Moreira AP, Brocchi M, Willems A, De Vos P, Thompson FL.

Int J Syst Evol Microbiol. 2011 Dec;61(Pt 12):3009-15. doi: 10.1099/ijs.0.026997-0. Epub 2011 Feb 4.

PMID:
21296931
40.

Erwinia oleae sp. nov., isolated from olive knots caused by Pseudomonas savastanoi pv. savastanoi.

Moretti C, Hosni T, Vandemeulebroecke K, Brady C, De Vos P, Buonaurio R, Cleenwerck I.

Int J Syst Evol Microbiol. 2011 Nov;61(Pt 11):2745-52. doi: 10.1099/ijs.0.026336-0. Epub 2010 Dec 24.

PMID:
21186287
41.

Vibrio atlanticus sp. nov. and Vibrio artabrorum sp. nov., isolated from the clams Ruditapes philippinarum and Ruditapes decussatus.

Diéguez AL, Beaz-Hidalgo R, Cleenwerck I, Balboa S, de Vos P, Romalde JL.

Int J Syst Evol Microbiol. 2011 Oct;61(Pt 10):2406-11. doi: 10.1099/ijs.0.025320-0. Epub 2010 Nov 12.

PMID:
21075909
42.

Vibrio celticus sp. nov., a new Vibrio species belonging to the Splendidus clade with pathogenic potential for clams.

Beaz-Hidalgo R, Diéguez AL, Cleenwerck I, Balboa S, Doce A, de Vos P, Romalde JL.

Syst Appl Microbiol. 2010 Oct;33(6):311-5. doi: 10.1016/j.syapm.2010.06.007. Epub 2010 Aug 17.

PMID:
20724091
43.

Phylogenetic variation of Aggregatibacter actinomycetemcomitans serotype e reveals an aberrant distinct evolutionary stable lineage.

van der Reijden WA, Brunner J, Bosch-Tijhof CJ, van Trappen S, Rijnsburger MC, de Graaff MP, van Winkelhoff AJ, Cleenwerck I, de Vos P.

Infect Genet Evol. 2010 Oct;10(7):1124-31. doi: 10.1016/j.meegid.2010.07.011. Epub 2010 Jul 21.

PMID:
20654735
44.

Marinomonas brasilensis sp. nov., isolated from the coral Mussismilia hispida, and reclassification of Marinomonas basaltis as a later heterotypic synonym of Marinomonas communis.

Chimetto LA, Cleenwerck I, Brocchi M, Willems A, De Vos P, Thompson FL.

Int J Syst Evol Microbiol. 2011 May;61(Pt 5):1170-5. doi: 10.1099/ijs.0.024661-0. Epub 2010 Jun 18.

PMID:
20562247
45.

Pantoea allii sp. nov., isolated from onion plants and seed.

Brady CL, Goszczynska T, Venter SN, Cleenwerck I, De Vos P, Gitaitis RD, Coutinho TA.

Int J Syst Evol Microbiol. 2011 Apr;61(Pt 4):932-7. doi: 10.1099/ijs.0.022921-0. Epub 2010 May 21.

PMID:
20495023
46.

Vibrio communis sp. nov., isolated from the marine animals Mussismilia hispida, Phyllogorgia dilatata, Palythoa caribaeorum, Palythoa variabilis and Litopenaeus vannamei.

Chimetto LA, Cleenwerck I, Alves N Jr, Silva BS, Brocchi M, Willems A, De Vos P, Thompson FL.

Int J Syst Evol Microbiol. 2011 Feb;61(Pt 2):362-8. doi: 10.1099/ijs.0.019729-0. Epub 2010 Mar 19.

PMID:
20305064
47.

Marinobacterium coralli sp. nov., isolated from mucus of coral (Mussismilia hispida).

Chimetto LA, Cleenwerck I, Brocchi M, Willems A, De Vos P, Thompson FL.

Int J Syst Evol Microbiol. 2011 Jan;61(Pt 1):60-4. doi: 10.1099/ijs.0.021105-0. Epub 2010 Feb 12.

PMID:
20154332
48.

Photobacterium jeanii sp. nov., isolated from corals and zoanthids.

Chimetto LA, Cleenwerck I, Thompson CC, Brocchi M, Willems A, De Vos P, Thompson FL.

Int J Syst Evol Microbiol. 2010 Dec;60(Pt 12):2843-8. doi: 10.1099/ijs.0.019968-0. Epub 2010 Jan 15.

PMID:
20081016
49.

Staphylococcus devriesei sp. nov., isolated from teat apices and milk of dairy cows.

Supré K, De Vliegher S, Cleenwerck I, Engelbeen K, Van Trappen S, Piepers S, Sampimon OC, Zadoks RN, De Vos P, Haesebrouck F.

Int J Syst Evol Microbiol. 2010 Dec;60(Pt 12):2739-44. doi: 10.1099/ijs.0.015982-0. Epub 2010 Jan 8.

PMID:
20061496
50.

Pantoea gaviniae sp. nov. and Pantoea calida sp. nov., isolated from infant formula and an infant formula production environment.

Popp A, Cleenwerck I, Iversen C, De Vos P, Stephan R.

Int J Syst Evol Microbiol. 2010 Dec;60(Pt 12):2786-92. doi: 10.1099/ijs.0.019430-0. Epub 2010 Jan 8.

PMID:
20061487

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