Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 11

1.

Analysis of the recombination landscape of hexaploid bread wheat reveals genes controlling recombination and gene conversion frequency.

Gardiner LJ, Wingen LU, Bailey P, Joynson R, Brabbs T, Wright J, Higgins JD, Hall N, Griffiths S, Clavijo BJ, Hall A.

Genome Biol. 2019 Apr 15;20(1):69. doi: 10.1186/s13059-019-1675-6.

2.

The ash dieback invasion of Europe was founded by two genetically divergent individuals.

McMullan M, Rafiqi M, Kaithakottil G, Clavijo BJ, Bilham L, Orton E, Percival-Alwyn L, Ward BJ, Edwards A, Saunders DGO, Garcia Accinelli G, Wright J, Verweij W, Koutsovoulos G, Yoshida K, Hosoya T, Williamson L, Jennings P, Ioos R, Husson C, Hietala AM, Vivian-Smith A, Solheim H, MaClean D, Fosker C, Hall N, Brown JKM, Swarbreck D, Blaxter M, Downie JA, Clark MD.

Nat Ecol Evol. 2018 Jun;2(6):1000-1008. doi: 10.1038/s41559-018-0548-9. Epub 2018 Apr 23.

3.

The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum.

Zimin AV, Puiu D, Hall R, Kingan S, Clavijo BJ, Salzberg SL.

Gigascience. 2017 Nov 1;6(11):1-7. doi: 10.1093/gigascience/gix097.

4.

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations.

Clavijo BJ, Venturini L, Schudoma C, Accinelli GG, Kaithakottil G, Wright J, Borrill P, Kettleborough G, Heavens D, Chapman H, Lipscombe J, Barker T, Lu FH, McKenzie N, Raats D, Ramirez-Gonzalez RH, Coince A, Peel N, Percival-Alwyn L, Duncan O, Trösch J, Yu G, Bolser DM, Namaati G, Kerhornou A, Spannagl M, Gundlach H, Haberer G, Davey RP, Fosker C, Palma FD, Phillips AL, Millar AH, Kersey PJ, Uauy C, Krasileva KV, Swarbreck D, Bevan MW, Clark MD.

Genome Res. 2017 May;27(5):885-896. doi: 10.1101/gr.217117.116.

5.

Genome sequence and genetic diversity of European ash trees.

Sollars ES, Harper AL, Kelly LJ, Sambles CM, Ramirez-Gonzalez RH, Swarbreck D, Kaithakottil G, Cooper ED, Uauy C, Havlickova L, Worswick G, Studholme DJ, Zohren J, Salmon DL, Clavijo BJ, Li Y, He Z, Fellgett A, McKinney LV, Nielsen LR, Douglas GC, Kjær ED, Downie JA, Boshier D, Lee S, Clark J, Grant M, Bancroft I, Caccamo M, Buggs RJ.

Nature. 2017 Jan 12;541(7636):212-216. doi: 10.1038/nature20786. Epub 2016 Dec 26.

PMID:
28024298
6.

KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies.

Mapleson D, Garcia Accinelli G, Kettleborough G, Wright J, Clavijo BJ.

Bioinformatics. 2017 Feb 15;33(4):574-576. doi: 10.1093/bioinformatics/btw663.

7.

Genome-guided investigation of plant natural product biosynthesis.

Kellner F, Kim J, Clavijo BJ, Hamilton JP, Childs KL, Vaillancourt B, Cepela J, Habermann M, Steuernagel B, Clissold L, McLay K, Buell CR, O'Connor SE.

Plant J. 2015 May;82(4):680-92. doi: 10.1111/tpj.12827. Epub 2015 Apr 11. Erratum in: Plant J. 2019 May;98(4):760.

8.

Sequencing quality assessment tools to enable data-driven informatics for high throughput genomics.

Leggett RM, Ramirez-Gonzalez RH, Clavijo BJ, Waite D, Davey RP.

Front Genet. 2013 Dec 17;4:288. doi: 10.3389/fgene.2013.00288. Review.

9.

NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries.

Leggett RM, Clavijo BJ, Clissold L, Clark MD, Caccamo M.

Bioinformatics. 2014 Feb 15;30(4):566-8. doi: 10.1093/bioinformatics/btt702. Epub 2013 Dec 2.

10.

The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability.

Li JW, Bolser D, Manske M, Giorgi FM, Vyahhi N, Usadel B, Clavijo BJ, Chan TF, Wong N, Zerbino D, Schneider MV.

Brief Bioinform. 2013 Sep;14(5):548-55. doi: 10.1093/bib/bbt045. Epub 2013 Jun 21.

11.

Development, characterization and experimental validation of a cultivated sunflower (Helianthus annuus L.) gene expression oligonucleotide microarray.

Fernandez P, Soria M, Blesa D, DiRienzo J, Moschen S, Rivarola M, Clavijo BJ, Gonzalez S, Peluffo L, Príncipi D, Dosio G, Aguirrezabal L, García-García F, Conesa A, Hopp E, Dopazo J, Heinz RA, Paniego N.

PLoS One. 2012;7(10):e45899. doi: 10.1371/journal.pone.0045899. Epub 2012 Oct 26.

Supplemental Content

Loading ...
Support Center