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Estimating Flight Style of Early Eocene Stem Palaeognath Bird Calciavis grandei (Lithornithidae).

Torres CR, Norell MA, Clarke JA.

Anat Rec (Hoboken). 2019 Jul 16. doi: 10.1002/ar.24207. [Epub ahead of print]


Evaluating the impact of organisational digital maturity on clinical outcomes in secondary care in England.

Martin G, Clarke J, Liew F, Arora S, King D, Aylin P, Darzi A.

NPJ Digit Med. 2019 May 16;2:41. doi: 10.1038/s41746-019-0118-9. eCollection 2019.


Guiding interoperable electronic health records through patient-sharing networks.

Clarke JM, Warren LR, Arora S, Barahona M, Darzi AW.

NPJ Digit Med. 2018 Dec 10;1:65. doi: 10.1038/s41746-018-0072-y. eCollection 2018.


Pharmacokinetic characteristics of vactosertib, a new activin receptor-like kinase 5 inhibitor, in patients with advanced solid tumors in a first-in-human phase 1 study.

Jung SY, Hwang S, Clarke JM, Bauer TM, Keedy VL, Lee H, Park N, Kim SJ, Lee JI.

Invest New Drugs. 2019 Jul 13. doi: 10.1007/s10637-019-00835-y. [Epub ahead of print]


Transcriptional characterisation of the Exaiptasia pallida pedal disc.

Davey PA, Rodrigues M, Clarke JL, Aldred N.

BMC Genomics. 2019 Jul 12;20(1):581. doi: 10.1186/s12864-019-5917-5.


Time series modeling of cell cycle exit identifies Brd4 dependent regulation of cerebellar neurogenesis.

Penas C, Maloof ME, Stathias V, Long J, Tan SK, Mier J, Fang Y, Valdes C, Rodriguez-Blanco J, Chiang CM, Robbins DJ, Liebl DJ, Lee JK, Hatten ME, Clarke J, Ayad NG.

Nat Commun. 2019 Jul 10;10(1):3028. doi: 10.1038/s41467-019-10799-5.


Post-release treatment uptake among participants of the Rhode Island Department of Corrections comprehensive medication assisted treatment program.

Martin RA, Gresko SA, Brinkley-Rubinstein L, Stein LAR, Clarke JG.

Prev Med. 2019 Jul 4:105766. doi: 10.1016/j.ypmed.2019.105766. [Epub ahead of print]


Viral delivery of a microRNA to Gba to the mouse central nervous system models neuronopathic Gaucher disease.

Jackson KL, Viel C, Clarke J, Bu J, Chan M, Wang B, Shihabuddin LS, Sardi SP.

Neurobiol Dis. 2019 Jun 21;130:104513. doi: 10.1016/j.nbd.2019.104513. [Epub ahead of print]


Single-cell transcriptomic analysis of tissue-resident memory T cells in human lung cancer.

Clarke J, Panwar B, Madrigal A, Singh D, Gujar R, Wood O, Chee SJ, Eschweiler S, King EV, Awad AS, Hanley CJ, McCann KJ, Bhattacharyya S, Woo E, Alzetani A, Seumois G, Thomas GJ, Ganesan AP, Friedmann PS, Sanchez-Elsner T, Ay F, Ottensmeier CH, Vijayanand P.

J Exp Med. 2019 Jun 21. pii: jem.20190249. doi: 10.1084/jem.20190249. [Epub ahead of print]


Consensus workshops on the development of an ADHD medication management protocol using QbTest: developing a clinical trial protocol with multidisciplinary stakeholders.

Hall CL, Brown S, James M, Martin JL, Brown N, Selby K, Clarke J, Williams L, Sayal K, Hollis C, Groom MJ.

BMC Med Res Methodol. 2019 Jun 18;19(1):126. doi: 10.1186/s12874-019-0772-2.


Basal Protrusions Mediate Spatiotemporal Patterns of Spinal Neuron Differentiation.

Hadjivasiliou Z, Moore RE, McIntosh R, Galea GL, Clarke JDW, Alexandre P.

Dev Cell. 2019 Jun 17;49(6):907-919.e10. doi: 10.1016/j.devcel.2019.05.035.


Using wastewater-based analysis to monitor the effects of legalized retail sales on cannabis consumption in Washington State, USA.

Burgard DA, Williams J, Westerman D, Rushing R, Carpenter R, LaRock A, Sadetsky J, Clarke J, Fryhle H, Pellman M, Banta-Green CJ.

Addiction. 2019 Jun 18. doi: 10.1111/add.14641. [Epub ahead of print]


Gastric per-oral endoscopic myotomy: Current status and future directions.

Podboy A, Hwang JH, Nguyen LA, Garcia P, Zikos TA, Kamal A, Triadafilopoulos G, Clarke JO.

World J Gastroenterol. 2019 Jun 7;25(21):2581-2590. doi: 10.3748/wjg.v25.i21.2581. Review.


Engineering Genetic Predisposition in Human Neuroepithelial Stem Cells Recapitulates Medulloblastoma Tumorigenesis.

Huang M, Tailor J, Zhen Q, Gillmor AH, Miller ML, Weishaupt H, Chen J, Zheng T, Nash EK, McHenry LK, An Z, Ye F, Takashima Y, Clarke J, Ayetey H, Cavalli FMG, Luu B, Moriarity BS, Ilkhanizadeh S, Chavez L, Yu C, Kurian KM, Magnaldo T, Sevenet N, Koch P, Pollard SM, Dirks P, Snyder MP, Largaespada DA, Cho YJ, Phillips JJ, Swartling FJ, Morrissy AS, Kool M, Pfister SM, Taylor MD, Smith A, Weiss WA.

Cell Stem Cell. 2019 Jun 13. pii: S1934-5909(19)30217-6. doi: 10.1016/j.stem.2019.05.013. [Epub ahead of print]


Noninferiority of Preservative-free Versus BAK-preserved Latanoprost-timolol Fixed Combination Eye Drops in Patients With Open-angle Glaucoma or Ocular Hypertension.

Aptel F, Pfeiffer N, Schmickler S, Clarke J, Lavín-Dapena C, Moreno-Montañés J, Żarnowski T, Csutak A, Jugaste T, Volksone L, Astakhov YS, Coupier L, Nordmann JP, Stalmans I; T2347 Study Group.

J Glaucoma. 2019 Jun;28(6):498-506. doi: 10.1097/IJG.0000000000001248.


Integrating natural history collections and comparative genomics to study the genetic architecture of convergent evolution.

Lamichhaney S, Card DC, Grayson P, Tonini JFR, Bravo GA, Näpflin K, Termignoni-Garcia F, Torres C, Burbrink F, Clarke JA, Sackton TB, Edwards SV.

Philos Trans R Soc Lond B Biol Sci. 2019 Jul 22;374(1777):20180248. doi: 10.1098/rstb.2018.0248. Epub 2019 Jun 3.


Recruiting to a Randomized Controlled Trial of a Web-Based Program for People With Type 2 Diabetes and Depression: Lessons Learned at the Intersection of e-Mental Health and Primary Care.

Fletcher S, Clarke J, Sanatkar S, Baldwin P, Gunn J, Zwar N, Campbell L, Wilhelm K, Harris M, Lapsley H, Hadzi-Pavlovic D, Proudfoot J.

J Med Internet Res. 2019 May 24;21(5):e12793. doi: 10.2196/12793.


Late Cognitive Consequences of Gestational Diabetes to the Offspring, in a New Mouse Model.

de Sousa RAL, de Lima EV, da Silva TP, de Souza RV, Figueiredo CP, Passos GF, Clarke JR.

Mol Neurobiol. 2019 May 21. doi: 10.1007/s12035-019-1624-0. [Epub ahead of print]


A Web-Based Cognitive Behavior Therapy Intervention to Improve Social and Occupational Functioning in Adults With Type 2 Diabetes (The SpringboarD Trial): Randomized Controlled Trial.

Clarke J, Sanatkar S, Baldwin PA, Fletcher S, Gunn J, Wilhelm K, Campbell L, Zwar N, Harris M, Lapsley H, Hadzi-Pavlovic D, Christensen H, Proudfoot J.

J Med Internet Res. 2019 May 21;21(5):e12246. doi: 10.2196/12246.


Transitions of care across hospital settings in patients with inflammatory bowel disease.

Warren LR, Clarke JM, Arora S, Barahona M, Arebi N, Darzi A.

World J Gastroenterol. 2019 May 7;25(17):2122-2132. doi: 10.3748/wjg.v25.i17.2122.


Publisher Correction: Cdh2 coordinates Myosin-II dependent internalisation of the zebrafish neural plate.

Araya C, Häkkinen HM, Carcamo L, Cerda M, Savy T, Rookyard C, Peyriéras N, Clarke JDW.

Sci Rep. 2019 May 17;9(1):7699. doi: 10.1038/s41598-019-43789-0.


Antidepressants in the elderly.

Lindblad AJ, Clarke JA, Lu S.

Can Fam Physician. 2019 May;65(5):340. No abstract available.


Adverse cutaneous drug reactions with antimalarials in cutaneous lupus and dermatomyositis: A retrospective cohort study.

Gonzalez CD, Hansen C, Clarke JT.

J Am Acad Dermatol. 2019 May 11. pii: S0190-9622(19)30715-7. doi: 10.1016/j.jaad.2019.04.068. [Epub ahead of print] No abstract available.


Microfluidic Fabrication of Biomimetic Helical Hydrogel Microfibers for Blood-Vessel-on-a-Chip Applications.

Jia L, Han F, Yang H, Turnbull G, Wang J, Clarke J, Shu W, Guo M, Li B.

Adv Healthc Mater. 2019 Jul;8(13):e1900435. doi: 10.1002/adhm.201900435. Epub 2019 May 13.


SIRT1 Activation: A Potential Strategy for Harnessing Endogenous Protection Against Delayed Cerebral Ischemia After Subarachnoid Hemorrhage.

Vellimana AK, Diwan D, Clarke J, Gidday JM, Zipfel GJ.

Neurosurgery. 2018 Sep 1;65(CN_suppl_1):1-5. doi: 10.1093/neuros/nyy201. No abstract available.


Optimizing Clinical and Cost Outcomes for Patients on Enteral Nutrition Support for Treatment of Exocrine Pancreatic Insufficiency: Proceedings from an Expert Advisory Board Meeting.

Boullata JI, Clarke JL, Stone A, Skoufalos A, Nash DB.

Popul Health Manag. 2019 Jun;22(S1):S1-S10. doi: 10.1089/pop.2019.0042. No abstract available.


Extrinsic conditions influence the self-association and structure of IF1, the regulatory protein of mitochondrial ATP synthase.

Boreikaite V, Wicky BIM, Watt IN, Clarke J, Walker JE.

Proc Natl Acad Sci U S A. 2019 May 21;116(21):10354-10359. doi: 10.1073/pnas.1903535116. Epub 2019 May 7.


Late Neurological Consequences of Zika Virus Infection: Risk Factors and Pharmaceutical Approaches.

Souza INO, Barros-Aragão FGQ, Frost PS, Figueiredo CP, Clarke JR.

Pharmaceuticals (Basel). 2019 Apr 17;12(2). pii: E60. doi: 10.3390/ph12020060. Review.


Potentially functional genetic variants in the TNF/TNFR signaling pathway genes predict survival of patients with non-small cell lung cancer in the PLCO cancer screening trial.

Guo Y, Feng Y, Liu H, Luo S, Clarke JW, Moorman PG, Su L, Shen S, Christiani DC, Wei Q.

Mol Carcinog. 2019 Jul;58(7):1094-1104. doi: 10.1002/mc.23017. Epub 2019 Apr 15.


Murky Waters for Diagnosis of Gastroparesis.

Kunkel DC, Clarke JO.

Clin Gastroenterol Hepatol. 2019 Apr 9. pii: S1542-3565(19)30366-0. doi: 10.1016/j.cgh.2019.04.008. [Epub ahead of print] No abstract available.


Neonatal infection leads to increased susceptibility to Aβ oligomer-induced brain inflammation, synapse loss and cognitive impairment in mice.

Frost PS, Barros-Aragão F, da Silva RT, Venancio A, Matias I, Lyra E Silva NM, Kincheski GC, Pimentel-Coelho PM, De Felice FG, Gomes FCA, Ferreira ST, Figueiredo CP, Clarke JR.

Cell Death Dis. 2019 Apr 11;10(4):323. doi: 10.1038/s41419-019-1529-x.


Ineffective esophageal motility: Concepts, future directions, and conclusions from the Stanford 2018 symposium.

Gyawali CP, Sifrim D, Carlson DA, Hawn M, Katzka DA, Pandolfino JE, Penagini R, Roman S, Savarino E, Tatum R, Vaezi M, Clarke JO, Triadafilopoulos G.

Neurogastroenterol Motil. 2019 Apr 11:e13584. doi: 10.1111/nmo.13584. [Epub ahead of print] Review.


Metabolic physiology explains macroevolutionary trends in the melanic colour system across amniotes.

Eliason CM, Clarke JA.

Proc Biol Sci. 2018 Dec 19;285(1893):20182014. doi: 10.1098/rspb.2018.2014.


Under Pressure: Do Volume-Based Measurements Define Rectal Hyposensitivity in Clinical Practice?

Kamal AN, Garcia P, Clarke JO.

Dig Dis Sci. 2019 May;64(5):1062-1063. doi: 10.1007/s10620-019-05613-7. No abstract available.


Durum wheat genome highlights past domestication signatures and future improvement targets.

Maccaferri M, Harris NS, Twardziok SO, Pasam RK, Gundlach H, Spannagl M, Ormanbekova D, Lux T, Prade VM, Milner SG, Himmelbach A, Mascher M, Bagnaresi P, Faccioli P, Cozzi P, Lauria M, Lazzari B, Stella A, Manconi A, Gnocchi M, Moscatelli M, Avni R, Deek J, Biyiklioglu S, Frascaroli E, Corneti S, Salvi S, Sonnante G, Desiderio F, Marè C, Crosatti C, Mica E, Özkan H, Kilian B, De Vita P, Marone D, Joukhadar R, Mazzucotelli E, Nigro D, Gadaleta A, Chao S, Faris JD, Melo ATO, Pumphrey M, Pecchioni N, Milanesi L, Wiebe K, Ens J, MacLachlan RP, Clarke JM, Sharpe AG, Koh CS, Liang KYH, Taylor GJ, Knox R, Budak H, Mastrangelo AM, Xu SS, Stein N, Hale I, Distelfeld A, Hayden MJ, Tuberosa R, Walkowiak S, Mayer KFX, Ceriotti A, Pozniak CJ, Cattivelli L.

Nat Genet. 2019 May;51(5):885-895. doi: 10.1038/s41588-019-0381-3. Epub 2019 Apr 8.


Factors affecting interpretation of national biomonitoring data from multiple countries: BPA as a case study.

LaKind JS, Pollock T, Naiman DQ, Kim S, Nagasawa A, Clarke J.

Environ Res. 2019 Jun;173:318-329. doi: 10.1016/j.envres.2019.03.047. Epub 2019 Mar 26.


Convergent regulatory evolution and loss of flight in paleognathous birds.

Sackton TB, Grayson P, Cloutier A, Hu Z, Liu JS, Wheeler NE, Gardner PP, Clarke JA, Baker AJ, Clamp M, Edwards SV.

Science. 2019 Apr 5;364(6435):74-78. doi: 10.1126/science.aat7244.


Assessing the Agreement of 5 Ideal Body Weight Calculations for Selecting Medication Dosages for Children With Obesity.

Moylan A, Appelbaum N, Clarke J, Feather C, Tairraz AF, Maconochie I, Darzi A.

JAMA Pediatr. 2019 Apr 1. doi: 10.1001/jamapediatrics.2019.0379. [Epub ahead of print] No abstract available.


A new landmark for measuring tibial component rotation after total knee arthroplasty.

Mahmood FF, Holloway NJ, Deakin AH, Clarke JV, Picard F.

Knee. 2019 Jun;26(3):779-786. doi: 10.1016/j.knee.2018.09.002. Epub 2019 Mar 27.


Combined oral contraceptive in female mice causes hyperinsulinemia due to β-cell hypersecretion and reduction in insulin clearance.

Oliveira CAR, Dos Reis Araujo T, Aguiar GS, da Silva Junior JA, Vettorazzi JF, Freitas IN, Oliveira KM, Boschero AC, Bonfleur ML, Clarke JR, Henriques HN, Ribeiro RA.

J Steroid Biochem Mol Biol. 2019 Jun;190:54-63. doi: 10.1016/j.jsbmb.2019.03.018. Epub 2019 Mar 25.


Non-inferiority of Preservative-free versus BAK-preserved Latanoprost-timolol Fixed Combination Eye Drops in Patients with Open-angle Glaucoma or Ocular Hypertension.

Aptel F, Pfeiffer N, Schmickler S, Clarke J, Lavín-Dapena C, Moreno-Montañés J, Żarnowski T, Csutak A, Jugaste T, Volksone L, Astakhov YS, Coupier L, Nordmann JP, Stalmans I; and the T2347 Study Group.

J Glaucoma. 2019 Mar 26. doi: 10.1097/IJG.0000000000001248. [Epub ahead of print]


Can research align with service? Lessons learned from the Big Experiment and National Biomechanics Day.

Shultz SP, Hughes-Oliver C, Wells D, Sheerin K, Fink PW, Handsfield GG, Hébert-Losier K, Clarke J, Queen RM.

J Biomech. 2019 Apr 18;87:202-205. doi: 10.1016/j.jbiomech.2019.03.006. Epub 2019 Mar 16.


Corrigendum to "The development and validation of a custom built device for assessing frontal knee joint laxity" [The Knee 24 (2017) 1307-1316].

Ismail SA, Simic M, Clarke JL, Lopes TJA, Pappas E.

Knee. 2019 Jun;26(3):809-810. doi: 10.1016/j.knee.2019.03.001. Epub 2019 Mar 21. No abstract available.


Identifying Predictors of Pressurized Submarine Escape Training (PSET) Attrition.

Hughes LM, Clarke J.

Mil Med. 2019 Mar 1;184(Suppl 1):476-487. doi: 10.1093/milmed/usy377.


Pregnancy Outcomes in US Prisons, 2016-2017.

Sufrin C, Beal L, Clarke J, Jones R, Mosher WD.

Am J Public Health. 2019 May;109(5):799-805. doi: 10.2105/AJPH.2019.305006. Epub 2019 Mar 21.


Teaching embryology through science fiction and role-play.

Kiecker C, Clarke J, Bell E.

Med Educ. 2019 May;53(5):519. doi: 10.1111/medu.13859. Epub 2019 Mar 19. No abstract available.


High Prevalence of Slow Transit Constipation in Patients With Gastroparesis.

Zikos TA, Kamal AN, Neshatian L, Triadafilopoulos G, Clarke JO, Nandwani M, Nguyen LA.

J Neurogastroenterol Motil. 2019 Apr 30;25(2):267-275. doi: 10.5056/jnm18206.


In vitro and in vivo roles of sphingosine kinase 2 during dengue virus infection.

Al-Shujairi WH, Clarke JN, Davies LT, Pitman MR, Calvert JK, Aloia AL, Pitson SM, Carr JM.

J Gen Virol. 2019 Apr;100(4):629-641. doi: 10.1099/jgv.0.001245. Epub 2019 Mar 14.


Parental obesity programs pancreatic cancer development in offspring.

da Cruz RS, Clarke J, Curi AC, Al-Yawar A, Jin L, Baird A, Cruz I, Kallakury BV, de Assis S.

Endocr Relat Cancer. 2019 Mar 1. pii: ERC-19-0016.R1. doi: 10.1530/ERC-19-0016. [Epub ahead of print]


Abdominal Pain in Patients with Gastroparesis: Associations with Gastroparesis Symptoms, Etiology of Gastroparesis, Gastric Emptying, Somatization, and Quality of Life.

Parkman HP, Wilson LA, Hasler WL, McCallum RW, Sarosiek I, Koch KL, Abell TL, Schey R, Kuo B, Snape WJ, Nguyen L, Farrugia G, Grover M, Clarke J, Miriel L, Tonascia J, Hamilton F, Pasricha PJ.

Dig Dis Sci. 2019 Mar 9. doi: 10.1007/s10620-019-05522-9. [Epub ahead of print]


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