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Genetic analysis of resistance to stripe rust in durum wheat (Triticum turgidum L. var. durum).

Lin X, N'Diaye A, Walkowiak S, Nilsen KT, Cory AT, Haile J, Kutcher HR, Ammar K, Loladze A, Huerta-Espino J, Clarke JM, Ruan Y, Knox R, Fobert P, Sharpe AG, Pozniak CJ.

PLoS One. 2018 Sep 19;13(9):e0203283. doi: 10.1371/journal.pone.0203283. eCollection 2018.


Incorporating Advanced Practice Providers into Gastroenterology Practice.

Nandwani MCR, Clarke JO.

Clin Gastroenterol Hepatol. 2018 Sep 12. pii: S1542-3565(18)30977-7. doi: 10.1016/j.cgh.2018.09.015. [Epub ahead of print] No abstract available.


The First Comprehensive Program for Opioid Use Disorder in a US Statewide Correctional System.

Clarke JG, Martin RA, Gresko SA, Rich JD.

Am J Public Health. 2018 Oct;108(10):1323-1325. doi: 10.2105/AJPH.2018.304666. No abstract available.


Health systems should be publicly funded and publicly provided.

Modi N, Clarke J, McKee M.

BMJ. 2018 Sep 10;362:k3580. doi: 10.1136/bmj.k3580. No abstract available.


The genetic landscape of gliomas arising after therapeutic radiation.

López GY, Van Ziffle J, Onodera C, Grenert JP, Yeh I, Bastian BC, Clarke J, Oberheim Bush NA, Taylor J, Chang S, Butowski N, Banerjee A, Mueller S, Kline C, Torkildson J, Samuel D, Siongco A, Raffel C, Gupta N, Kunwar S, Mummaneni P, Aghi M, Theodosopoulos P, Berger M, Phillips JJ, Pekmezci M, Tihan T, Bollen AW, Perry A, Solomon DA.

Acta Neuropathol. 2018 Sep 8. doi: 10.1007/s00401-018-1906-z. [Epub ahead of print]


Free Radical Scavenging Capacity, Carotenoid Content, and NMR Characterization of Blighia sapida Aril Oil.

Barnaby AG, Clarke J, Warren D, Duffus K.

J Lipids. 2018 Aug 13;2018:1762342. doi: 10.1155/2018/1762342. eCollection 2018.


Spin Lifetime and Charge Noise in Hot Silicon Quantum Dot Qubits.

Petit L, Boter JM, Eenink HGJ, Droulers G, Tagliaferri MLV, Li R, Franke DP, Singh KJ, Clarke JS, Schouten RN, Dobrovitski VV, Vandersypen LMK, Veldhorst M.

Phys Rev Lett. 2018 Aug 17;121(7):076801. doi: 10.1103/PhysRevLett.121.076801.


Gene-by-Environment Interaction of Bcrp-/- and MCD Diet-Induced Nonalcoholic Steatohepatitis Alters SN-38 Disposition.

Toth EL, Li H, Dzierlenga AL, Clarke JD, Vildhede A, Goedken M, Cherrington NJ.

Drug Metab Dispos. 2018 Aug 30. pii: dmd.118.082081. doi: 10.1124/dmd.118.082081. [Epub ahead of print]


Paternal malnutrition programs breast cancer risk and tumor metabolism in offspring.

da Cruz RS, Carney EJ, Clarke J, Cao H, Cruz MI, Benitez C, Jin L, Fu Y, Cheng Z, Wang Y, de Assis S.

Breast Cancer Res. 2018 Aug 30;20(1):99. doi: 10.1186/s13058-018-1034-7.


The CBP® mirror image® approach to reducing thoracic hyperkyphosis: a retrospective case series of 10 patients.

Oakley PA, Jaeger JO, Brown JE, Polatis TA, Clarke JG, Whittler CD, Harrison DE.

J Phys Ther Sci. 2018 Aug;30(8):1039-1045. doi: 10.1589/jpts.30.1039. Epub 2018 Jul 24.


Clostridium septicum arthroplasty infection: beware of occult aortitis and malignancy.

Turnbull G, Spierits E, Russell D, Clarke J, Picard F, Sarungi M.

Scott Med J. 2018 Aug 28:36933018793525. doi: 10.1177/0036933018793525. [Epub ahead of print]


Phase-2 trial of palbociclib in adult patients with recurrent RB1-positive glioblastoma.

Taylor JW, Parikh M, Phillips JJ, James CD, Molinaro AM, Butowski NA, Clarke JL, Oberheim-Bush NA, Chang SM, Berger MS, Prados M.

J Neurooncol. 2018 Aug 27. doi: 10.1007/s11060-018-2977-3. [Epub ahead of print]


Erratum for Cornick et al., "Epidemiological and Molecular Characterization of an Invasive Group A Streptococcus emm32.2 Outbreak".

Cornick JE, Kiran AM, Vivancos R, Van Aartsen J, Clarke J, Bevan E, Alsahag M, Alaearts M, Bricio Moreno L, Jenkinson HF, Nobbs AH, Anson J, Kadioglu A, French N, Everett DB.

J Clin Microbiol. 2018 Aug 27;56(9). pii: e01001-18. doi: 10.1128/JCM.01001-18. Print 2018 Sep. No abstract available.


Ultrasound diagnosis of molar pregnancy.

Ross JA, Unipan A, Clarke J, Magee C, Johns J.

Ultrasound. 2018 Aug;26(3):153-159. doi: 10.1177/1742271X17748514. Epub 2018 Mar 2.


Patient-specific predictors of failure to rescue after pancreaticoduodenectomy.

Gleeson EM, Clarke JR, Morano WF, Shaikh MF, Bowne WB, Pitt HA.

HPB (Oxford). 2018 Aug 21. pii: S1365-182X(18)32709-6. doi: 10.1016/j.hpb.2018.07.022. [Epub ahead of print]


The human brainome: network analysis identifies HSPA2 as a novel Alzheimer’s disease target.

Petyuk VA, Chang R, Ramirez-Restrepo M, Beckmann ND, Henrion MYR, Piehowski PD, Zhu K, Wang S, Clarke J, Huentelman MJ, Xie F, Andreev V, Engel A, Guettoche T, Navarro L, De Jager P, Schneider JA, Morris CM, McKeith IG, Perry RH, Lovestone S, Woltjer RL, Beach TG, Sue LI, Serrano GE, Lieberman AP, Albin RL, Ferrer I, Mash DC, Hulette CM, Ervin JF, Reiman EM, Hardy JA, Bennett DA, Schadt E, Smith RD, Myers AJ.

Brain. 2018 Sep 1;141(9):2721-2739. doi: 10.1093/brain/awy215.


Depression among Women Released from Prison or Jail in the United States.

Shuford SH, Gjelsvik A, Clarke J, van den Berg JJ.

J Health Care Poor Underserved. 2018;29(3):914-929. doi: 10.1353/hpu.2018.0068.


Varicella in the prison setting: A report of three outbreaks in Rhode Island and a review of the literature.

Murphy M, Berns AL, Bandyopadhyay U, Rich J, Quilliam DN, Clarke J, Kane K, Salas C, Yousaf A, Reece R.

Vaccine. 2018 Sep 5;36(37):5651-5656. doi: 10.1016/j.vaccine.2018.07.031. Epub 2018 Aug 10.


Genetic Simulation Resources and the GSR Certification Program.

Peng B, Leong MC, Chen HS, Rotunno M, Brignole KR, Clarke J, Mechanic LE.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty666. [Epub ahead of print] No abstract available.


Acute localized exanthematous pustulosis (ALEP) caused by lamotrigine.

Hopkins Z, Frigerio A, Clarke JT.

JAAD Case Rep. 2018 Jul 25;4(7):645-647. doi: 10.1016/j.jdcr.2018.03.017. eCollection 2018 Aug. No abstract available.


The HARMONIC trial: study protocol for a randomised controlled feasibility trial of Shaping Healthy Minds-a modular transdiagnostic intervention for mood, stressor-related and anxiety disorders in adults.

Black M, Hitchcock C, Bevan A, O Leary C, Clarke J, Elliott R, Watson P, LaFortune L, Rae S, Gilbody S, Kuyken W, Johnston D, Newby JM, Dalgleish T.

BMJ Open. 2018 Aug 5;8(8):e024546. doi: 10.1136/bmjopen-2018-024546.


Oral administration of a chimeric Hepatitis B Virus S/preS1 antigen produced in lettuce triggers infection neutralizing antibodies in mice.

Dobrica MO, Lazar C, Paruch L, van Eerde A, Clarke JL, Tucureanu C, Caras I, Ciulean S, Onu A, Tofan V, Branzan A, Urban S, Stavaru C, Branza-Nichita N.

Vaccine. 2018 Sep 11;36(38):5789-5795. doi: 10.1016/j.vaccine.2018.07.072. Epub 2018 Aug 3.


Clinical and manometric characteristics of patients with oesophagogastric outflow obstruction: towards a new classification.

Triadafilopoulos G, Clarke JO.

BMJ Open Gastroenterol. 2018 Jul 25;5(1):e000210. doi: 10.1136/bmjgast-2018-000210. eCollection 2018.


Fifteen-minute consultation on the healthy child: Bowel habit in infants and children.

Clarke J, Tighe MP.

Arch Dis Child Educ Pract Ed. 2018 Aug 2. pii: edpract-2018-315162. doi: 10.1136/archdischild-2018-315162. [Epub ahead of print]


Yield of Malignant Pleural Effusion for Detection of Oncogenic Driver Mutations in Lung Adenocarcinoma.

DeMaio A, Clarke JM, Dash R, Sebastian S, Wahidi MM, Shofer SL, Cheng GZ, Li X, Wang X, Mahmood K.

J Bronchology Interv Pulmonol. 2018 Jul 25. doi: 10.1097/LBR.0000000000000534. [Epub ahead of print]


Biocompatible, Purified VEGF-A mRNA Improves Cardiac Function after Intracardiac Injection 1 Week Post-myocardial Infarction in Swine.

Carlsson L, Clarke JC, Yen C, Gregoire F, Albery T, Billger M, Egnell AC, Gan LM, Jennbacken K, Johansson E, Linhardt G, Martinsson S, Sadiq MW, Witman N, Wang QD, Chen CH, Wang YP, Lin S, Ticho B, Hsieh PCH, Chien KR, Fritsche-Danielson R.

Mol Ther Methods Clin Dev. 2018 Apr 10;9:330-346. doi: 10.1016/j.omtm.2018.04.003. eCollection 2018 Jun 15.


Broccoli Sprouts Delay Prostate Cancer Formation and Decrease Prostate Cancer Severity with a Concurrent Decrease in HDAC3 Protein Expression in Transgenic Adenocarcinoma of the Mouse Prostate (TRAMP) Mice.

Beaver LM, Lӧhr CV, Clarke JD, Glasser ST, Watson GW, Wong CP, Zhang Z, Williams DE, Dashwood RH, Shannon J, Thuillier P, Ho E.

Curr Dev Nutr. 2017 Dec 26;2(3):nzy002. doi: 10.1093/cdn/nzy002. eCollection 2018 Mar.


Ethics in radiology: A case-based approach.

Stiles-Clarke L, Clarke J.

Can Med Educ J. 2018 May 31;9(2):e79-e83. eCollection 2018 May.


Effects of canonical color, luminance, and orientation on sustained inattentional blindness for scenes.

Webster K, Clarke J, Mack A, Ro T.

Atten Percept Psychophys. 2018 Jul 9. doi: 10.3758/s13414-018-1558-z. [Epub ahead of print]


A crossbar network for silicon quantum dot qubits.

Li R, Petit L, Franke DP, Dehollain JP, Helsen J, Steudtner M, Thomas NK, Yoscovits ZR, Singh KJ, Wehner S, Vandersypen LMK, Clarke JS, Veldhorst M.

Sci Adv. 2018 Jul 6;4(7):eaar3960. doi: 10.1126/sciadv.aar3960. eCollection 2018 Jul.


Reliability and correlates of cross-sectional area of abductor hallucis and the medial belly of the flexor hallucis brevis measured by ultrasound.

Latey PJ, Burns J, Nightingale EJ, Clarke JL, Hiller CE.

J Foot Ankle Res. 2018 Jun 7;11:28. doi: 10.1186/s13047-018-0259-0. eCollection 2018.


Systematics and phylogeny of the Zygodactylidae (Aves, Neognathae) with description of a new species from the early Eocene of Wyoming, USA.

Smith NA, DeBee AM, Clarke JA.

PeerJ. 2018 Jun 25;6:e4950. doi: 10.7717/peerj.4950. eCollection 2018.


Use of Esophageal pH Monitoring to Minimize Proton-Pump Inhibitor Utilization in Patients with Gastroesophageal Reflux Symptoms.

Triadafilopoulos G, Zikos T, Regalia K, Sonu I, Fernandez-Becker NQ, Nguyen L, Nandwani MCR, Clarke JO.

Dig Dis Sci. 2018 Oct;63(10):2673-2680. doi: 10.1007/s10620-018-5183-4. Epub 2018 Jun 29.


The transformative role of interaction rituals within therapeutic communities.

Clarke JM, Waring J.

Sociol Health Illn. 2018 Jun 29. doi: 10.1111/1467-9566.12773. [Epub ahead of print]


Probiotic Bifidobacterium strains and galactooligosaccharides improve intestinal barrier function in obese adults but show no synergism when used together as synbiotics.

Krumbeck JA, Rasmussen HE, Hutkins RW, Clarke J, Shawron K, Keshavarzian A, Walter J.

Microbiome. 2018 Jun 28;6(1):121. doi: 10.1186/s40168-018-0494-4.


A Positive Correlation Between Gastric and Esophageal Dysmotility Suggests Common Causality.

Zikos TA, Clarke JO, Triadafilopoulos G, Regalia KA, Sonu IS, Fernandez-Becker NQ, Nandwani MC, Nguyen LA.

Dig Dis Sci. 2018 Jun 26. doi: 10.1007/s10620-018-5175-4. [Epub ahead of print]


Convergent evolution of a mobile bony tongue in flighted dinosaurs and pterosaurs.

Li Z, Zhou Z, Clarke JA.

PLoS One. 2018 Jun 20;13(6):e0198078. doi: 10.1371/journal.pone.0198078. eCollection 2018.


The genetic landscape of ganglioglioma.

Pekmezci M, Villanueva-Meyer JE, Goode B, Van Ziffle J, Onodera C, Grenert JP, Bastian BC, Chamyan G, Maher OM, Khatib Z, Kleinschmidt-DeMasters BK, Samuel D, Mueller S, Banerjee A, Clarke JL, Cooney T, Torkildson J, Gupta N, Theodosopoulos P, Chang EF, Berger M, Bollen AW, Perry A, Tihan T, Solomon DA.

Acta Neuropathol Commun. 2018 Jun 7;6(1):47. doi: 10.1186/s40478-018-0551-z.


Acute and chronic neurological consequences of early-life Zika virus infection in mice.

Nem de Oliveira Souza I, Frost PS, França JV, Nascimento-Viana JB, Neris RLS, Freitas L, Pinheiro DJLL, Nogueira CO, Neves G, Chimelli L, De Felice FG, Cavalheiro ÉA, Ferreira ST, Assunção-Miranda I, Figueiredo CP, Da Poian AT, Clarke JR.

Sci Transl Med. 2018 Jun 6;10(444). pii: eaar2749. doi: 10.1126/scitranslmed.aar2749.


Control of Feeding Behavior by Cerebral Ventricular Volume Transmission of Melanin-Concentrating Hormone.

Noble EE, Hahn JD, Konanur VR, Hsu TM, Page SJ, Cortella AM, Liu CM, Song MY, Suarez AN, Szujewski CC, Rider D, Clarke JE, Darvas M, Appleyard SM, Kanoski SE.

Cell Metab. 2018 Jul 3;28(1):55-68.e7. doi: 10.1016/j.cmet.2018.05.001. Epub 2018 May 31.


Combined malonic and methylmalonic aciduria due to ACSF3 mutations: benign clinical course in an unselected cohort.

Levtova A, Waters PJ, Buhas D, Lévesque S, Auray-Blais C, Clarke JTR, Laframboise R, Maranda B, Mitchell GA, Brunel-Guitton C, Braverman NE.

J Inherit Metab Dis. 2018 Jun 1. doi: 10.1007/s10545-018-0197-9. [Epub ahead of print]


Vocal specialization through tracheal elongation in an extinct Miocene pheasant from China.

Li Z, Clarke JA, Eliason CM, Stidham TA, Deng T, Zhou Z.

Sci Rep. 2018 May 25;8(1):8099. doi: 10.1038/s41598-018-26178-x.


Acute Exposure to Low-to-Moderate Carbon Dioxide Levels and Submariner Decision Making.

Rodeheffer CD, Chabal S, Clarke JM, Fothergill DM.

Aerosp Med Hum Perform. 2018 Jun 1;89(6):520-525. doi: 10.3357/AMHP.5010.2018. Erratum in: Aerosp Med Hum Perform. 2018 Jul 1;89(7):667.


Nonerosive reflux disease: clinical concepts.

Gyawali CP, Azagury DE, Chan WW, Chandramohan SM, Clarke JO, de Bortoli N, Figueredo E, Fox M, Jodorkovsky D, Lazarescu A, Malfertheiner P, Martinek J, Murayama KM, Penagini R, Savarino E, Shetler KP, Stein E, Tatum RP, Wu J.

Ann N Y Acad Sci. 2018 May 15. doi: 10.1111/nyas.13845. [Epub ahead of print] Review.


Search for Invisible Axion Dark Matter with the Axion Dark Matter Experiment.

Du N, Force N, Khatiwada R, Lentz E, Ottens R, Rosenberg LJ, Rybka G, Carosi G, Woollett N, Bowring D, Chou AS, Sonnenschein A, Wester W, Boutan C, Oblath NS, Bradley R, Daw EJ, Dixit AV, Clarke J, O'Kelley SR, Crisosto N, Gleason JR, Jois S, Sikivie P, Stern I, Sullivan NS, Tanner DB, Hilton GC; ADMX Collaboration.

Phys Rev Lett. 2018 Apr 13;120(15):151301. doi: 10.1103/PhysRevLett.120.151301.


Indications and interpretation of esophageal function testing.

Gyawali CP, de Bortoli N, Clarke J, Marinelli C, Tolone S, Roman S, Savarino E.

Ann N Y Acad Sci. 2018 May 12. doi: 10.1111/nyas.13709. [Epub ahead of print] Review.


3D bioactive composite scaffolds for bone tissue engineering.

Turnbull G, Clarke J, Picard F, Riches P, Jia L, Han F, Li B, Shu W.

Bioact Mater. 2017 Dec 1;3(3):278-314. doi: 10.1016/j.bioactmat.2017.10.001. eCollection 2018 Sep. Review.


TEMPORARY REMOVAL: Reference intervals for putative biomarkers of drug-induced liver injury and liver regeneration in healthy human volunteers.

Francis B, Clarke JI, Walker LE, Brillant N, Jorgensen AL, Park BK, Pirmohamed M, Antoine DJ.

J Hepatol. 2018 May 3. pii: S0168-8278(18)32042-7. doi: 10.1016/j.jhep.2018.04.024. [Epub ahead of print]


Folding and binding pathways of BH3-only proteins are encoded within their intrinsically disordered sequence, not templated by partner proteins.

Crabtree MD, Mendonça CATF, Bubb QR, Clarke J.

J Biol Chem. 2018 Jun 22;293(25):9718-9723. doi: 10.1074/jbc.RA118.002791. Epub 2018 May 1.

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