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Items: 1 to 50 of 258

1.

TuxNet: A simple interface to process RNA sequencing data and infer gene regulatory networks.

Spurney RJ, Van den Broeck L, Clark NM, Fisher AP, de Luis Balaguer MA, Sozzani R.

Plant J. 2019 Sep 30. doi: 10.1111/tpj.14558. [Epub ahead of print]

PMID:
31571287
2.

Regulatory T Cells Control the Switch From in situ to Invasive Breast Cancer.

Martinez LM, Robila V, Clark NM, Du W, Idowu MO, Rutkowski MR, Bos PD.

Front Immunol. 2019 Aug 29;10:1942. doi: 10.3389/fimmu.2019.01942. eCollection 2019.

3.

Nucleo-cytoplasmic Partitioning of ARF Proteins Controls Auxin Responses in Arabidopsis thaliana.

Powers SK, Holehouse AS, Korasick DA, Schreiber KH, Clark NM, Jing H, Emenecker R, Han S, Tycksen E, Hwang I, Sozzani R, Jez JM, Pappu RV, Strader LC.

Mol Cell. 2019 Oct 3;76(1):177-190.e5. doi: 10.1016/j.molcel.2019.06.044. Epub 2019 Aug 14.

PMID:
31421981
4.

Auxin Induces Widespread Proteome Remodeling in Arabidopsis Seedlings.

Clark NM, Shen Z, Briggs SP, Walley JW, Kelley DR.

Proteomics. 2019 Sep;19(17):e1900199. doi: 10.1002/pmic.201900199. Epub 2019 Aug 16.

PMID:
31381813
5.

Single-Copy Knock-In Loci for Defined Gene Expression in Caenorhabditis elegans.

Silva-García CG, Lanjuin A, Heintz C, Dutta S, Clark NM, Mair WB.

G3 (Bethesda). 2019 Jul 9;9(7):2195-2198. doi: 10.1534/g3.119.400314.

6.

Nocardia infections in solid organ transplantation: Guidelines from the Infectious Diseases Community of Practice of the American Society of Transplantation.

Restrepo A, Clark NM; Infectious Diseases Community of Practice of the American Society of Transplantation.

Clin Transplant. 2019 Sep;33(9):e13509. doi: 10.1111/ctr.13509. Epub 2019 Mar 19.

PMID:
30817024
7.

Tumor-Associated Macrophage Isolation and In Vivo Analysis of Their Tumor-Promoting Activity.

Clark NM, Bos PD.

Methods Mol Biol. 2019;1884:151-160. doi: 10.1007/978-1-4939-8885-3_10.

PMID:
30465201
8.

Computational prediction of gene regulatory networks in plant growth and development.

Haque S, Ahmad JS, Clark NM, Williams CM, Sozzani R.

Curr Opin Plant Biol. 2019 Feb;47:96-105. doi: 10.1016/j.pbi.2018.10.005. Epub 2018 Nov 14. Review.

PMID:
30445315
9.

Identifying Differentially Expressed Genes Using Fluorescence-Activated Cell Sorting (FACS) and RNA Sequencing from Low Input Samples.

Clark NM, Fisher AP, Sozzani R.

Methods Mol Biol. 2018;1819:139-151. doi: 10.1007/978-1-4939-8618-7_6.

PMID:
30421402
10.

Macrophage response to hydrophilic biomaterials regulates MSC recruitment and T-helper cell populations.

Hotchkiss KM, Clark NM, Olivares-Navarrete R.

Biomaterials. 2018 Nov;182:202-215. doi: 10.1016/j.biomaterials.2018.08.029. Epub 2018 Aug 11.

PMID:
30138783
11.

Platelet-rich plasma and alignment enhance myogenin via ERK mitogen activated protein kinase signaling.

McClure MJ, Clark NM, Schwartz Z, Boyan BD.

Biomed Mater. 2018 Jul 24;13(5):055009. doi: 10.1088/1748-605X/aad0a7.

PMID:
29967311
12.

Prospective Countywide Surveillance and Autopsy Characterization of Sudden Cardiac Death: POST SCD Study.

Tseng ZH, Olgin JE, Vittinghoff E, Ursell PC, Kim AS, Sporer K, Yeh C, Colburn B, Clark NM, Khan R, Hart AP, Moffatt E.

Circulation. 2018 Jun 19;137(25):2689-2700. doi: 10.1161/CIRCULATIONAHA.117.033427.

13.

Fungal Infections Complicating Lung Transplantation.

Clark NM, Weigt SS, Fishbein MC, Kubak B, Belperio JA, Lynch JP 3rd.

Semin Respir Crit Care Med. 2018 Apr;39(2):227-254. doi: 10.1055/s-0037-1617443. Epub 2018 Mar 26. Review.

PMID:
29579774
14.

GTL1 and DF1 regulate root hair growth through transcriptional repression of ROOT HAIR DEFECTIVE 6-LIKE 4 in Arabidopsis.

Shibata M, Breuer C, Kawamura A, Clark NM, Rymen B, Braidwood L, Morohashi K, Busch W, Benfey PN, Sozzani R, Sugimoto K.

Development. 2018 Feb 8;145(3). pii: dev159707. doi: 10.1242/dev.159707.

15.

The human, F-actin-based cytoskeleton as a mutagen sensor.

Clark NM, Garcia Galindo CA, Patel VK, Parry ML, Stoll RJ, Yavorski JM, Pinkason EP, Johnson EM, Walker CM, Johnson J, Sexton WJ, Coppola D, Blanck G.

Cancer Cell Int. 2017 Dec 12;17:121. doi: 10.1186/s12935-017-0488-5. eCollection 2017.

16.

Sensitivity and Specificity of Skyline and Carpal Shoot-Through Fluoroscopic Views of Volar Plate Fixation of the Distal Radius: A Cadaveric Investigation of Dorsal Cortex Screw Penetration.

Stoops TK, Santoni BG, Clark NM, Bauer AA, Shoji C, Schwartz-Fernandes F.

Hand (N Y). 2017 Nov;12(6):551-556. doi: 10.1177/1558944716677336. Epub 2016 Nov 1.

17.

Change in Surgical Practice for Women With Leiomyomas After the U.S. Food and Drug Administration Morcellator Safety Communication.

Clark NM, Schembri M, Jacoby VL.

Obstet Gynecol. 2017 Nov;130(5):1057-1063. doi: 10.1097/AOG.0000000000002309.

PMID:
29016511
18.

Predicting gene regulatory networks by combining spatial and temporal gene expression data in Arabidopsis root stem cells.

de Luis Balaguer MA, Fisher AP, Clark NM, Fernandez-Espinosa MG, Möller BK, Weijers D, Lohmann JU, Williams C, Lorenzo O, Sozzani R.

Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):E7632-E7640. doi: 10.1073/pnas.1707566114. Epub 2017 Aug 21.

19.

Aspergillus calidoustus case series and review of the literature.

Seroy J, Antiporta P, Grim SA, Proia LA, Singh K, Clark NM.

Transpl Infect Dis. 2017 Oct;19(5). doi: 10.1111/tid.12755. Epub 2017 Sep 19. Review.

PMID:
28741738
20.

Emergence of Antimicrobial Resistance among Pseudomonas aeruginosa: Implications for Therapy.

Lynch JP 3rd, Zhanel GG, Clark NM.

Semin Respir Crit Care Med. 2017 Jun;38(3):326-345. doi: 10.1055/s-0037-1602583. Epub 2017 Jun 4. Review.

PMID:
28578556
21.

Infections Due to Acinetobacter baumannii in the ICU: Treatment Options.

Lynch JP 3rd, Zhanel GG, Clark NM.

Semin Respir Crit Care Med. 2017 Jun;38(3):311-325. doi: 10.1055/s-0037-1599225. Epub 2017 Jun 4.

PMID:
28578555
22.

Increased risk of PTLD in lung transplant recipients with cystic fibrosis.

Lowery EM, Adams W, Grim SA, Clark NM, Edwards L, Layden JE.

J Cyst Fibros. 2017 Nov;16(6):727-734. doi: 10.1016/j.jcf.2017.03.013. Epub 2017 Apr 27.

23.
24.

Update in the treatment of non-influenza respiratory virus infection in solid organ transplant recipients.

Grim SA, Reid GE, Clark NM.

Expert Opin Pharmacother. 2017 Jun;18(8):767-779. doi: 10.1080/14656566.2017.1322063. Epub 2017 Apr 28. Review.

PMID:
28425766
25.

Emergence of antimicrobial resistance among Acinetobacter species: a global threat.

Clark NM, Zhanel GG, Lynch JP 3rd.

Curr Opin Crit Care. 2016 Oct;22(5):491-9. doi: 10.1097/MCC.0000000000000337. Review.

PMID:
27552304
26.

Herpesvirus Respiratory Infections in Immunocompromised Patients: Epidemiology, Management, and Outcomes.

Reid GE, Lynch JP 3rd, Weigt S, Sayah D, Belperio JA, Grim SA, Clark NM.

Semin Respir Crit Care Med. 2016 Aug;37(4):603-30. doi: 10.1055/s-0036-1584793. Epub 2016 Aug 3. Review.

PMID:
27486740
27.

Tracking transcription factor mobility and interaction in Arabidopsis roots with fluorescence correlation spectroscopy.

Clark NM, Hinde E, Winter CM, Fisher AP, Crosti G, Blilou I, Gratton E, Benfey PN, Sozzani R.

Elife. 2016 Jun 11;5. pii: e14770. doi: 10.7554/eLife.14770.

28.

Treatment of MDR urinary tract infections with oral fosfomycin: a retrospective analysis.

Seroy JT, Grim SA, Reid GE, Wellington T, Clark NM.

J Antimicrob Chemother. 2016 Sep;71(9):2563-8. doi: 10.1093/jac/dkw178. Epub 2016 May 30.

PMID:
27246234
29.

Role of integrin α7β1 signaling in myoblast differentiation on aligned polydioxanone scaffolds.

McClure MJ, Clark NM, Hyzy SL, Chalfant CE, Olivares-Navarrete R, Boyan BD, Schwartz Z.

Acta Biomater. 2016 Jul 15;39:44-54. doi: 10.1016/j.actbio.2016.04.046. Epub 2016 Apr 30.

PMID:
27142254
30.

An 87-Year-Old Man with Acute Catastrophic Pneumonia.

Mohamed AM, Waheed SA, Mohamed NM, Clark NM.

Ann Am Thorac Soc. 2016 Mar;13(3):432-7. doi: 10.1513/AnnalsATS.201507-418CC. No abstract available.

PMID:
26963355
31.

Current practices for treatment of respiratory syncytial virus and other non-influenza respiratory viruses in high-risk patient populations: a survey of institutions in the Midwestern Respiratory Virus Collaborative.

Beaird OE, Freifeld A, Ison MG, Lawrence SJ, Theodoropoulos N, Clark NM, Razonable RR, Alangaden G, Miller R, Smith J, Young JA, Hawkinson D, Pursell K, Kaul DR.

Transpl Infect Dis. 2016 Apr;18(2):210-5. doi: 10.1111/tid.12510. Epub 2016 Mar 29.

PMID:
26923867
32.

Serial testing for latent tuberculosis infection in transplant candidates: a retrospective review.

Roth PJ, Grim SA, Gallitano S, Adams W, Clark NM, Layden JE.

Transpl Infect Dis. 2016 Feb;18(1):14-21. doi: 10.1111/tid.12489. Epub 2016 Feb 3. Review.

PMID:
26671024
33.

Posaconazole: Use in the Prophylaxis and Treatment of Fungal Infections.

Clark NM, Grim SA, Lynch JP 3rd.

Semin Respir Crit Care Med. 2015 Oct;36(5):767-85. doi: 10.1055/s-0035-1562902. Epub 2015 Sep 23. Review.

PMID:
26398542
34.

Latent tuberculosis in kidney and liver transplant patients: a review of treatment practices and outcomes.

Grim SA, Layden JE, Roth P, Gallitano S, Adams W, Clark NM.

Transpl Infect Dis. 2015 Oct;17(5):768-77. doi: 10.1111/tid.12436. Epub 2015 Oct 3.

PMID:
26263530
35.

Sudden Death in Patients With Cardiac Implantable Electronic Devices.

Tseng ZH, Hayward RM, Clark NM, Mulvanny CG, Colburn BJ, Ursell PC, Olgin JE, Hart AP, Moffatt E.

JAMA Intern Med. 2015 Aug;175(8):1342-50. doi: 10.1001/jamainternmed.2015.2641.

PMID:
26098676
36.

Antimicrobial resistance in hospital-acquired gram-negative bacterial infections.

Mehrad B, Clark NM, Zhanel GG, Lynch JP 3rd.

Chest. 2015 May;147(5):1413-1421. doi: 10.1378/chest.14-2171. Review.

37.

The extent and patterns of multiple chronic conditions in low-income children.

Clark NM, Lachance L, Benedict MB, Little R, Leo H, Awad DF, Wilkin MK.

Clin Pediatr (Phila). 2015 Apr;54(4):353-8. doi: 10.1177/0009922815574073.

PMID:
25802420
38.

Acinetobacter baumannii infection in solid organ transplant recipients.

Kitazono H, Rog D, Grim SA, Clark NM, Reid GE.

Clin Transplant. 2015 Mar;29(3):227-32. doi: 10.1111/ctr.12508. Epub 2015 Jan 30.

PMID:
25580999
39.

A migrating ciliary gate compartmentalizes the site of axoneme assembly in Drosophila spermatids.

Basiri ML, Ha A, Chadha A, Clark NM, Polyanovsky A, Cook B, Avidor-Reiss T.

Curr Biol. 2014 Nov 17;24(22):2622-31. doi: 10.1016/j.cub.2014.09.047. Epub 2014 Oct 30.

40.

Cross-site evaluation of the Alliance to Reduce Disparities in Diabetes: clinical and patient-reported outcomes.

Lewis MA, Bann CM, Karns SA, Hobbs CL, Holt S, Brenner J, Fleming N, Johnson P, Langwell K, Peek ME, Burton JA, Hoerger TJ, Clark NM, Kamerow DB.

Health Promot Pract. 2014 Nov;15(2 Suppl):92S-102S. doi: 10.1177/1524839914545168.

41.

Alliance system and policy change: necessary ingredients for improvement in diabetes care and reduction of disparities.

Clark NM, Quinn M, Dodge JA, Nelson BW.

Health Promot Pract. 2014 Nov;15(2 Suppl):11S-22S. doi: 10.1177/1524839914543829.

PMID:
25359245
42.

Declines with age in childhood asthma symptoms and health care use: an adjustment for evaluations.

Ko YA, Song PX, Clark NM.

Health Educ Behav. 2014 Oct;41(5):539-49. doi: 10.1177/1090198114547513.

PMID:
25270179
43.

Policy and system change and community coalitions: outcomes from allies against asthma.

Clark NM, Lachance L, Doctor LJ, Gilmore L, Kelly C, Krieger J, Lara M, Meurer J, Milanovich AF, Nicholas E, Rosenthal M, Stoll SC, Wilkin M.

Health Educ Behav. 2014 Oct;41(5):528-38. doi: 10.1177/1090198114547507.

PMID:
25270178
44.

Heart disease management by women: does intervention format matter?

Clark NM, Janz NK, Dodge JA, Lin X, Trabert BL, Kaciroti N, Mosca L, Wheeler JR, Keteyian S.

Health Educ Behav. 2014 Oct;41(5):518-27. doi: 10.1177/1090198114547516.

PMID:
25270177
45.

Impact of Physician Asthma Care Education on patient outcomes.

Cabana MD, Slish KK, Evans D, Mellins RB, Brown RW, Lin X, Kaciroti N, Clark NM.

Health Educ Behav. 2014 Oct;41(5):509-17. doi: 10.1177/1090198114547510.

PMID:
25270176
46.

A model of self-regulation for control of chronic disease.

Clark NM, Gong M, Kaciroti N.

Health Educ Behav. 2014 Oct;41(5):499-508. doi: 10.1177/1090198114547701.

PMID:
25270175
47.

Health educators and the future: lead, follow, or get out of the way.

Clark NM.

Health Educ Behav. 2014 Oct;41(5):492-8. doi: 10.1177/1090198114547509.

PMID:
25270174
48.

A social cognitive view of self-regulated learning about health.

Clark NM, Zimmerman BJ.

Health Educ Behav. 2014 Oct;41(5):485-91. doi: 10.1177/1090198114547512.

PMID:
25270173
49.

The effect on health and self-confidence of participation in collaborative learning activities.

Clark NM, Gakuru ON.

Health Educ Behav. 2014 Oct;41(5):476-84. doi: 10.1177/1090198114549157. No abstract available.

PMID:
25270172
50.

Experimental data and computational modeling link auxin gradient and development in the Arabidopsis root.

Clark NM, de Luis Balaguer MA, Sozzani R.

Front Plant Sci. 2014 Jul 7;5:328. doi: 10.3389/fpls.2014.00328. eCollection 2014. Review.

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