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Comparative structural and evolutionary analyses predict functional sites in the artemisinin resistance malaria protein K13.

Coppée R, Jeffares DC, Miteva MA, Sabbagh A, Clain J.

Sci Rep. 2019 Jul 23;9(1):10675. doi: 10.1038/s41598-019-47034-6.


Antimalarial Drugs for Malaria Elimination.

Clain J, Hamza A, Ariey F.

Methods Mol Biol. 2019;2013:151-162. doi: 10.1007/978-1-4939-9550-9_11.


Mucosal T follicular helper cells in SIV-infected rhesus macaques: contributing role of IL-27.

Moukambi F, Rabezanahary H, Fortier Y, Rodrigues V, Clain J, Benmadid-Laktout G, Zghidi-Abouzid O, Soundaramourty C, Laforge M, Estaquier J.

Mucosal Immunol. 2019 Jul;12(4):1038-1054. doi: 10.1038/s41385-019-0174-0. Epub 2019 May 21.


Clinical Outcomes of Limited Open Intramedullary Headless Screw Fixation of Metacarpal Fractures in 91 Consecutive Patients.

Eisenberg G, Clain JB, Feinberg-Zadek N, Leibman M, Belsky M, Ruchelsman DE.

Hand (N Y). 2019 Mar 17:1558944719836235. doi: 10.1177/1558944719836235. [Epub ahead of print]


Comparison of the QuantiFERON-TB Gold Plus and QuantiFERON-TB Gold In-Tube Interferon Gamma Release Assays in Patients at Risk for Tuberculosis and in Health Care Workers.

Theel ES, Hilgart H, Breen-Lyles M, McCoy K, Flury R, Breeher LE, Wilson J, Sia IG, Whitaker JA, Clain J, Aksamit TR, Escalante P.

J Clin Microbiol. 2018 Jun 25;56(7). pii: e00614-18. doi: 10.1128/JCM.00614-18. Print 2018 Jul.


Ulnar Nerve Complications After Ulnar Collateral Ligament Reconstruction of the Elbow: A Systematic Review.

Clain JB, Vitale MA, Ahmad CS, Ruchelsman DE.

Am J Sports Med. 2019 Apr;47(5):1263-1269. doi: 10.1177/0363546518765139. Epub 2018 Apr 23.


Pneumocystis Cytochrome b Mutants Associated With Atovaquone Prophylaxis Failure as the Cause of Pneumocystis Infection Outbreak Among Heart Transplant Recipients.

Argy N, Le Gal S, Coppée R, Song Z, Vindrios W, Massias L, Kao WC, Hunte C, Yazdanpanah Y, Lucet JC, Houzé S, Clain J, Nevez G.

Clin Infect Dis. 2018 Aug 31;67(6):913-919. doi: 10.1093/cid/ciy154. Erratum in: Clin Infect Dis. 2019 Jan 1;68(1):175.


Multidrug-resistant Plasmodium falciparum malaria in the Greater Mekong subregion.

Ménard D, Clain J, Ariey F.

Lancet Infect Dis. 2018 Mar;18(3):238-239. doi: 10.1016/S1473-3099(18)30071-9. Epub 2018 Feb 2. No abstract available.


Extracorporeal elimination of butalbital in acute aspirin-butalbital-caffeine-codeine (Fiorinal with Codeine) poisoning.

Poyant JO, Albright R, Clain J, Pandompatam G, Barreto EF.

Clin Toxicol (Phila). 2018 Jun;56(6):439-441. doi: 10.1080/15563650.2017.1400554. Epub 2017 Nov 10.


Influence of host factors and parasite biomass on the severity of imported Plasmodium falciparum malaria.

Argy N, Kendjo E, Augé-Courtoi C, Cojean S, Clain J, Houzé P, Thellier M, Hubert V, Deloron P, Houzé S; CNRP study group.

PLoS One. 2017 Apr 14;12(4):e0175328. doi: 10.1371/journal.pone.0175328. eCollection 2017.


Immunoglobulin (Ig)M antibodies to proteinase 3 in granulomatosis with polyangiitis and microscopic polyangiitis.

Clain JM, Hummel AM, Stone JH, Fervenza FC, Hoffman GS, Kallenberg CG, Langford CA, McCune WJ, Merkel PA, Monach PA, Seo P, Spiera RF, St Clair EW, Ytterberg SR, Specks U; WGET and RAVE-ITN Research Groups.

Clin Exp Immunol. 2017 Apr;188(1):174-181. doi: 10.1111/cei.12925. Epub 2017 Feb 7.


[Acquisition of atovaquone-proguanil resistance in imported falciparum malaria in a young child].

Aurégan C, Argy N, Hubert V, Aprahamian A, Clain J, Cheron G.

Presse Med. 2017 Mar;46(3):344-346. doi: 10.1016/j.lpm.2016.11.018. Epub 2016 Dec 28. French. No abstract available.


Preferential expression of domain cassettes 4, 8 and 13 of Plasmodium falciparum erythrocyte membrane protein 1 in severe malaria imported in France.

Argy N, Bertin GI, Milet J, Hubert V, Clain J, Cojean S, Houzé P, Tuikue-Ndam N, Kendjo E, Deloron P, Houzé S; CNRP Study Group.

Clin Microbiol Infect. 2017 Mar;23(3):211.e1-211.e4. doi: 10.1016/j.cmi.2016.10.012. Epub 2016 Oct 20.


Cystatin C Falsely Underestimated GFR in a Critically Ill Patient with a New Diagnosis of AIDS.

Brown CS, Kashani KB, Clain JM, Frazee EN.

Case Rep Nephrol. 2016;2016:9349280. doi: 10.1155/2016/9349280. Epub 2016 May 17.


Obstructive jaundice in autoimmune pancreatitis can be safely treated with corticosteroids alone without biliary stenting.

Bi Y, Hart PA, Law R, Clain JE, Farnell MB, Gleeson FC, Kendrick ML, Levy MJ, Pearson RK, Petersen BT, Pisney LD, Smyrk TC, Takahashi N, Topazian MD, Vege SS, Chari ST.

Pancreatology. 2016 May-Jun;16(3):391-6. doi: 10.1016/j.pan.2016.03.017. Epub 2016 Apr 6.


In Vitro Analysis of the Interaction between Atovaquone and Proguanil against Liver Stage Malaria Parasites.

Barata L, Houzé P, Boutbibe K, Zanghi G, Franetich JF, Mazier D, Clain J.

Antimicrob Agents Chemother. 2016 Jun 20;60(7):4333-5. doi: 10.1128/AAC.01685-15. Print 2016 Jul.


Response to "Breach of the thyroid capsule and lymph node capsule in node-positive papillary and medullary thyroid cancer: Different biology".

Rowe ME, Clain JB, Scherl S, Dos Reis L, Turk A, Wenig BM, Mehra S, Urken ML.

Eur J Surg Oncol. 2016 Jan;42(1):156-7. doi: 10.1016/j.ejso.2015.09.029. Epub 2015 Nov 18. No abstract available.


The antimalarial drug primaquine targets Fe-S cluster proteins and yeast respiratory growth.

Lalève A, Vallières C, Golinelli-Cohen MP, Bouton C, Song Z, Pawlik G, Tindall SM, Avery SV, Clain J, Meunier B.

Redox Biol. 2016 Apr;7:21-29. doi: 10.1016/j.redox.2015.10.008. Epub 2015 Nov 26.


Staged laryngeal reconstruction with a prefabricated flap for radiation recurrent glottic carcinoma.

Mourad MW, Su HK, Castro JR, Lazarus CL, Clain JB, Mojica JS, Urken ML.

Laryngoscope. 2016 May;126(5):1061-70. doi: 10.1002/lary.25593. Epub 2015 Nov 6.


Approach to en bloc resection and reconstruction of primary masticator space malignancies.

Castro J, Likhterov I, Mehra S, Bassiri-Tehrani M, Scherl S, Clain J, Buchbinder D, Urken ML.

Laryngoscope. 2016 Feb;126(2):372-7. doi: 10.1002/lary.25500. Epub 2015 Nov 3. Review.


EUS-guided ethanol lavage does not reliably ablate pancreatic cystic neoplasms (with video).

Gómez V, Takahashi N, Levy MJ, McGee KP, Jones A, Huang Y, Chari ST, Clain JE, Gleeson FC, Pearson RK, Petersen BT, Rajan E, Vege SS, Topazian MD.

Gastrointest Endosc. 2016 May;83(5):914-20. doi: 10.1016/j.gie.2015.08.069. Epub 2015 Sep 9.


Interplay between the hinge region of iron sulphur protein and the Qo site in the bc1 complex - Analysis of Plasmodium-like mutations in the yeast enzyme.

Song Z, Clain J, Iorga BI, Vallières C, Lalève A, Fisher N, Meunier B.

Biochim Biophys Acta. 2015 Dec;1847(12):1487-94. doi: 10.1016/j.bbabio.2015.08.005. Epub 2015 Aug 21.


Glucose control in critical care.

Clain J, Ramar K, Surani SR.

World J Diabetes. 2015 Aug 10;6(9):1082-91. doi: 10.4239/wjd.v6.i9.1082.


Clinical profiles and outcomes in idiopathic duct-centric chronic pancreatitis (type 2 autoimmune pancreatitis): the Mayo Clinic experience.

Hart PA, Levy MJ, Smyrk TC, Takahashi N, Abu Dayyeh BK, Clain JE, Gleeson FC, Pearson RK, Petersen BT, Topazian MD, Vege SS, Zhang L, Chari ST.

Gut. 2016 Oct;65(10):1702-9. doi: 10.1136/gutjnl-2015-309275. Epub 2015 Jun 17.


Saccharomyces cerevisiae-based mutational analysis of the bc1 complex Qo site residue 279 to study the trade-off between atovaquone resistance and function.

Song Z, Clain J, Iorga BI, Yi Z, Fisher N, Meunier B.

Antimicrob Agents Chemother. 2015 Jul;59(7):4053-8. doi: 10.1128/AAC.00710-15. Epub 2015 Apr 27.


Impact of celiac neurolysis on survival in patients with pancreatic cancer.

Fujii-Lau LL, Bamlet WR, Eldrige JS, Chari ST, Gleeson FC, Abu Dayyeh BK, Clain JE, Pearson RK, Petersen BT, Rajan E, Topazian MD, Vege SS, Wang KK, Wiersema MJ, Levy MJ.

Gastrointest Endosc. 2015 Jul;82(1):46-56.e2. doi: 10.1016/j.gie.2014.12.036. Epub 2015 Mar 20.


The string sign for diagnosis of mucinous pancreatic cysts.

Bick BL, Enders FT, Levy MJ, Zhang L, Henry MR, Abu Dayyeh BK, Chari ST, Clain JE, Farnell MB, Gleeson FC, Kendrick ML, Pearson RK, Petersen BT, Rajan E, Vege SS, Topazian M.

Endoscopy. 2015 Jul;47(7):626-31. doi: 10.1055/s-0034-1391484. Epub 2015 Mar 2.


EUS-derived criteria for distinguishing benign from malignant metastatic solid hepatic masses.

Fujii-Lau LL, Abu Dayyeh BK, Bruno MJ, Chang KJ, DeWitt JM, Fockens P, Forcione D, Napoleon B, Palazzo L, Topazian MD, Wiersema MJ, Chak A, Clain JE, Faigel DO, Gleeson FC, Hawes R, Iyer PG, Rajan E, Stevens T, Wallace MB, Wang KK, Levy MJ.

Gastrointest Endosc. 2015 May;81(5):1188-96.e1-7. doi: 10.1016/j.gie.2014.10.035. Epub 2015 Feb 7.


Detection of peritoneal carcinomatosis by EUS fine-needle aspiration: impact on staging and resectability (with videos).

Levy MJ, Abu Dayyeh BK, Fujii LL, Clayton AC, Reynolds JP, Lopes TL, Rao AS, Clain JE, Gleeson FC, Iyer PG, Kendrick ML, Rajan E, Topazian MD, Wang KK, Wiersema MJ, Chari ST.

Gastrointest Endosc. 2015 May;81(5):1215-24. doi: 10.1016/j.gie.2014.10.028. Epub 2015 Feb 7.


Pancreatic juice prostaglandin e2 concentrations are elevated in chronic pancreatitis and improve detection of early disease.

Abu Dayyeh BK, Conwell D, Buttar NS, Kadilaya V, Hart PA, Baumann NA, Bick BL, Chari ST, Chowdhary S, Clain JE, Gleeson FC, Lee LS, Levy MJ, Pearson RK, Petersen BT, Rajan E, Steen H, Suleiman S, Banks PA, Vege SS, Topazian M.

Clin Transl Gastroenterol. 2015 Jan 29;6:e72. doi: 10.1038/ctg.2014.23.


Database and registry research in thyroid cancer: striving for a new and improved national thyroid cancer database.

Mehra S, Tuttle RM, Milas M, Orloff L, Bergman D, Bernet V, Brett E, Cobin R, Doherty G, Judson BL, Klopper J, Lee S, Lupo M, Machac J, Mechanick JI, Randolph G, Ross DS, Smallridge R, Terris D, Tufano R, Alon E, Clain J, DosReis L, Scherl S, Urken ML.

Thyroid. 2015 Feb;25(2):157-68. doi: 10.1089/thy.2014.0270. Epub 2015 Jan 16. Review.


Ultrasound guidance of steroid injections.

Clain J, Leibman MI, Belsky MR, Ruchelsman DE.

J Hand Surg Am. 2014 Dec;39(12):2498-501. doi: 10.1016/j.jhsa.2014.09.027. Epub 2014 Oct 23. Review. No abstract available.


Intrathyroidal tumors presenting with extranodal extension: what are we missing?

Clain JB, Mehra S, Scherl S, Dos Reis LL, Turk A, Wenig BM, Dewey EH, Urken ML.

Endocr Pathol. 2014 Dec;25(4):385-9. doi: 10.1007/s12022-014-9340-9.


What is the gold standard for comprehensive interinstitutional communication of perioperative information for thyroid cancer patients? A comparison of existing electronic health records with the current American Thyroid Association recommendations.

Dos Reis LL, Tuttle RM, Alon E, Bergman DA, Bernet V, Brett EM, Cobin R, Doherty G, Harris JR, Klopper J, Lee SL, Lupo M, Milas M, Machac J, Mechanick JI, Orloff L, Randolph G, Ross DS, Smallridge RC, Terris DJ, Tufano RP, Mehra S, Scherl S, Clain JB, Urken ML.

Thyroid. 2014 Oct;24(10):1466-72. doi: 10.1089/thy.2014.0209. Epub 2014 Sep 5. Review.


Emergence of resistance to atovaquone-proguanil in malaria parasites: insights from computational modeling and clinical case reports.

Cottrell G, Musset L, Hubert V, Le Bras J, Clain J; Atovaquone-Proguanil Treatment Failure Study Group.

Antimicrob Agents Chemother. 2014 Aug;58(8):4504-14. doi: 10.1128/AAC.02550-13. Epub 2014 May 27.


Noninvasive anaplastic thyroid carcinoma: report of a case and literature review.

Dibelius G, Mehra S, Clain JB, Urken ML, Wenig BM.

Thyroid. 2014 Aug;24(8):1319-24. doi: 10.1089/thy.2013.0586. Epub 2014 Jul 2. Review.


Subscapular system of flaps: An 8-year experience with 105 patients.

Gibber MJ, Clain JB, Jacobson AS, Buchbinder D, Scherl S, Zevallos JP, Mehra S, Urken ML.

Head Neck. 2015 Aug;37(8):1200-6. doi: 10.1002/hed.23738. Epub 2014 Jul 10.


The differential diagnosis of central compartment radioactive iodine uptake after thyroidectomy: anatomic and surgical considerations.

Dos Reis LL, Mehra S, Scherl S, Clain J, Machac J, Urken ML.

Endocr Pract. 2014 Aug;20(8):832-8. doi: 10.4158/EP13435.RA.


Experience with rituximab in the treatment of antineutrophil cytoplasmic antibody associated vasculitis.

Clain JM, Cartin-Ceba R, Fervenza FC, Specks U.

Ther Adv Musculoskelet Dis. 2014 Apr;6(2):58-74. doi: 10.1177/1759720X13516239. Review.


Improving the quality of thyroid cancer care: how does the Thyroid Cancer Care Collaborative cross the Institute of Medicine's Quality Chasm?

Mehra S, Tuttle RM, Bergman D, Bernet V, Brett E, Cobin R, Doherty G, Klopper J, Lee S, Machac J, Milas M, Mechanick JI, Orloff L, Randolph G, Ross DS, Smallridge R, Terris D, Tufano R, Alon E, Clain J, Dos Reis L, Scherl S, Urken ML.

Thyroid. 2014 Apr;24(4):615-24. doi: 10.1089/thy.2013.0441. Review.


Prospective evaluation of adverse events following lower gastrointestinal tract EUS FNA.

Levy MJ, Abu Dayyeh BK, Fujii LL, Boardman LA, Clain JE, Iyer PG, Rajan E, Topazian MD, Wang KK, Wiersema MJ, Gleeson FC.

Am J Gastroenterol. 2014 May;109(5):676-85. doi: 10.1038/ajg.2013.479. Epub 2014 Jan 28.


Extrathyroidal extension predicts extranodal extension in patients with positive lymph nodes: an important association that may affect clinical management.

Clain JB, Scherl S, Dos Reis L, Turk A, Wenig BM, Mehra S, Karle WE, Urken ML.

Thyroid. 2014 Jun;24(6):951-7. doi: 10.1089/thy.2013.0557. Epub 2014 May 5.


Management of recurrent and persistent metastatic lymph nodes in well-differentiated thyroid cancer: a multifactorial decision-making guide for the Thyroid Cancer Care Collaborative.

Urken ML, Milas M, Randolph GW, Tufano R, Bergman D, Bernet V, Brett EM, Brierley JD, Cobin R, Doherty G, Klopper J, Lee S, Machac J, Mechanick JI, Orloff LA, Ross D, Smallridge RC, Terris DJ, Clain JB, Tuttle M.

Head Neck. 2015 Apr;37(4):605-14. doi: 10.1002/hed.23615. Epub 2014 Apr 3.


Radiology quiz case 2: hypoglossal nerve schwannoma of the submandibularspace.

Viets R, Scherl S, Clain JB, Urken ML, Khorsandi A.

JAMA Otolaryngol Head Neck Surg. 2013 May;139(5):523-4. doi: 10.1001/jamaoto.2013.2878a. Review. No abstract available.


Castleman disease in the parapharyngeal space: a case report and review of the literature.

Clain JB, Scherl S, Karle WE, Khorsandi A, Ghali V, Wang B, Urken ML.

Head Neck Pathol. 2013 Dec;7(4):389-92. doi: 10.1007/s12105-013-0449-9. Epub 2013 May 16. Review.


S1. Rituximab for ANCA-associated vasculitis: the experience in the United States.

Clain JM, Specks U.

Presse Med. 2013 Apr;42(4 Pt 2):530-2. doi: 10.1016/j.lpm.2013.01.048. Epub 2013 Mar 7. Review. No abstract available.


Trismus release in a pediatric patient using a parascapular free flap reconstruction following desmoid tumor resection.

Crawley MB, Anand SM, Clain JB, Scherl S, Buchbinder D, Urken ML.

Laryngoscope. 2013 Jun;123(6):1451-4. doi: 10.1002/lary.23897. Epub 2013 Jan 11. No abstract available.


Total soft palate reconstruction using the palatal island and lateral pharyngeal wall flaps.

Karle WE, Anand SM, Clain JB, Scherl S, Urken ML.

Laryngoscope. 2013 Apr;123(4):929-33. doi: 10.1002/lary.23787. Epub 2012 Nov 20. No abstract available.


Use of a combined latissimus dorsi scapular free flap revascularized with vein grafting to the internal mammary artery in a vessel-depleted and previously irradiated neck.

Karle WE, Anand SM, Clain JB, Scherl S, Buchbinder D, Smith ML, Urken ML.

Head Neck. 2013 Nov;35(11):E328-32. doi: 10.1002/hed.23194. Epub 2012 Nov 14.


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