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Items: 15

1.

Mediator Condensates Localize Signaling Factors to Key Cell Identity Genes.

Zamudio AV, Dall'Agnese A, Henninger JE, Manteiga JC, Afeyan LK, Hannett NM, Coffey EL, Li CH, Oksuz O, Sabari BR, Boija A, Klein IA, Hawken SW, Spille JH, Decker TM, Cisse II, Abraham BJ, Lee TI, Taatjes DJ, Schuijers J, Young RA.

Mol Cell. 2019 Dec 5;76(5):753-766.e6. doi: 10.1016/j.molcel.2019.08.016. Epub 2019 Sep 25.

PMID:
31563432
2.

Voices in methods development.

Anikeeva P, Boyden E, Brangwynne C, Cissé II, Fiehn O, Fromme P, Gingras AC, Greene CS, Heard E, Hell SW, Hillman E, Jensen GJ, Karchin R, Kiessling LL, Kleinstiver BP, Knight R, Kukura P, Lancaster MA, Loman N, Looger L, Lundberg E, Luo Q, Miyawaki A, Myers EW Jr, Nolan GP, Picotti P, Reik W, Sauer M, Shalek AK, Shendure J, Slavov N, Tanay A, Troyanskaya O, van Valen D, Wang HW, Yi C, Yin P, Zernicka-Goetz M, Zhuang X.

Nat Methods. 2019 Oct;16(10):945-951. doi: 10.1038/s41592-019-0585-6. No abstract available.

PMID:
31562479
3.

Pol II phosphorylation regulates a switch between transcriptional and splicing condensates.

Guo YE, Manteiga JC, Henninger JE, Sabari BR, Dall'Agnese A, Hannett NM, Spille JH, Afeyan LK, Zamudio AV, Shrinivas K, Abraham BJ, Boija A, Decker TM, Rimel JK, Fant CB, Lee TI, Cisse II, Sharp PA, Taatjes DJ, Young RA.

Nature. 2019 Aug;572(7770):543-548. doi: 10.1038/s41586-019-1464-0. Epub 2019 Aug 7.

PMID:
31391587
4.

A first order phase transition mechanism underlies protein aggregation in mammalian cells.

Narayanan A, Meriin A, Andrews JO, Spille JH, Sherman MY, Cisse II.

Elife. 2019 Feb 4;8. pii: e39695. doi: 10.7554/eLife.39695.

5.

A CRISPR/Cas9 platform for MS2-labelling of single mRNA in live stem cells.

Spille JH, Hecht M, Grube V, Cho WK, Lee C, Cissé II.

Methods. 2019 Jan 15;153:35-45. doi: 10.1016/j.ymeth.2018.09.004. Epub 2018 Sep 12.

PMID:
30217531
6.

Hsp70-Bag3 complex is a hub for proteotoxicity-induced signaling that controls protein aggregation.

Meriin AB, Narayanan A, Meng L, Alexandrov I, Varelas X, Cissé II, Sherman MY.

Proc Natl Acad Sci U S A. 2018 Jul 24;115(30):E7043-E7052. doi: 10.1073/pnas.1803130115. Epub 2018 Jul 9.

7.

Mediator and RNA polymerase II clusters associate in transcription-dependent condensates.

Cho WK, Spille JH, Hecht M, Lee C, Li C, Grube V, Cisse II.

Science. 2018 Jul 27;361(6400):412-415. doi: 10.1126/science.aar4199. Epub 2018 Jun 21.

8.

Coactivator condensation at super-enhancers links phase separation and gene control.

Sabari BR, Dall'Agnese A, Boija A, Klein IA, Coffey EL, Shrinivas K, Abraham BJ, Hannett NM, Zamudio AV, Manteiga JC, Li CH, Guo YE, Day DS, Schuijers J, Vasile E, Malik S, Hnisz D, Lee TI, Cisse II, Roeder RG, Sharp PA, Chakraborty AK, Young RA.

Science. 2018 Jul 27;361(6400). pii: eaar3958. doi: 10.1126/science.aar3958. Epub 2018 Jun 21.

9.

qSR: a quantitative super-resolution analysis tool reveals the cell-cycle dependent organization of RNA Polymerase I in live human cells.

Andrews JO, Conway W, Cho WK, Narayanan A, Spille JH, Jayanth N, Inoue T, Mullen S, Thaler J, Cissé II.

Sci Rep. 2018 May 9;8(1):7424. doi: 10.1038/s41598-018-25454-0.

10.

Global analysis of double-strand break processing reveals in vivo properties of the helicase-nuclease complex AddAB.

Badrinarayanan A, Le TBK, Spille JH, Cisse II, Laub MT.

PLoS Genet. 2017 May 10;13(5):e1006783. doi: 10.1371/journal.pgen.1006783. eCollection 2017 May.

11.

Super-resolution imaging of fluorescently labeled, endogenous RNA Polymerase II in living cells with CRISPR/Cas9-mediated gene editing.

Cho WK, Jayanth N, Mullen S, Tan TH, Jung YJ, Cissé II.

Sci Rep. 2016 Oct 26;6:35949. doi: 10.1038/srep35949.

12.

RNA Polymerase II cluster dynamics predict mRNA output in living cells.

Cho WK, Jayanth N, English BP, Inoue T, Andrews JO, Conway W, Grimm JB, Spille JH, Lavis LD, Lionnet T, Cisse II.

Elife. 2016 May 3;5. pii: e13617. doi: 10.7554/eLife.13617.

13.

Single-molecule tracking in live cells reveals distinct target-search strategies of transcription factors in the nucleus.

Izeddin I, Récamier V, Bosanac L, Cissé II, Boudarene L, Dugast-Darzacq C, Proux F, Bénichou O, Voituriez R, Bensaude O, Dahan M, Darzacq X.

Elife. 2014 Jun 12;3. doi: 10.7554/eLife.02230.

14.

Real-time dynamics of RNA polymerase II clustering in live human cells.

Cisse II, Izeddin I, Causse SZ, Boudarene L, Senecal A, Muresan L, Dugast-Darzacq C, Hajj B, Dahan M, Darzacq X.

Science. 2013 Aug 9;341(6146):664-7. doi: 10.1126/science.1239053. Epub 2013 Jul 4.

15.

A rule of seven in Watson-Crick base-pairing of mismatched sequences.

Cisse II, Kim H, Ha T.

Nat Struct Mol Biol. 2012 May 13;19(6):623-7. doi: 10.1038/nsmb.2294.

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