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Items: 19

1.

A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies.

Sun Z, Chen L, Xin H, Jiang Y, Huang Q, Cillo AR, Tabib T, Kolls JK, Bruno TC, Lafyatis R, Vignali DAA, Chen K, Ding Y, Hu M, Chen W.

Nat Commun. 2019 Apr 9;10(1):1649. doi: 10.1038/s41467-019-09639-3.

2.

Associations between HIV-1 DNA copy number, proviral transcriptional activity, and plasma viremia in individuals off or on suppressive antiretroviral therapy.

Hong F, Jacobs JL, Aga E, Cillo AR, Fyne E, Koontz DL, Zheng L, Mellors JW.

Virology. 2018 Aug;521:51-57. doi: 10.1016/j.virol.2018.05.018. Epub 2018 Jun 4.

PMID:
29879542
3.

Blood biomarkers of expressed and inducible HIV-1.

Cillo AR, Hong F, Tsai A, Irrinki A, Kaur J, Sloan DD, Follen M, Geleziunas R, Cihlar T, Win SS, Murry JP, Mellors JW.

AIDS. 2018 Mar 27;32(6):699-708. doi: 10.1097/QAD.0000000000001748.

4.

Single-cell analysis of HIV-1 transcriptional activity reveals expression of proviruses in expanded clones during ART.

Wiegand A, Spindler J, Hong FF, Shao W, Cyktor JC, Cillo AR, Halvas EK, Coffin JM, Mellors JW, Kearney MF.

Proc Natl Acad Sci U S A. 2017 May 2;114(18):E3659-E3668. doi: 10.1073/pnas.1617961114. Epub 2017 Apr 17.

5.

Which therapeutic strategy will achieve a cure for HIV-1?

Cillo AR, Mellors JW.

Curr Opin Virol. 2016 Jun;18:14-9. doi: 10.1016/j.coviro.2016.02.001. Epub 2016 Mar 15. Review.

PMID:
26985878
6.

Novel Assays for Measurement of Total Cell-Associated HIV-1 DNA and RNA.

Hong F, Aga E, Cillo AR, Yates AL, Besson G, Fyne E, Koontz DL, Jennings C, Zheng L, Mellors JW.

J Clin Microbiol. 2016 Apr;54(4):902-11. doi: 10.1128/JCM.02904-15. Epub 2016 Jan 13.

7.

HIV-1 Virion Production from Single Inducible Proviruses following T-Cell Activation Ex Vivo.

Bui JK, Mellors JW, Cillo AR.

J Virol. 2015 Nov 11;90(3):1673-6. doi: 10.1128/JVI.02520-15. Print 2016 Feb 1.

8.

Virologic and immunologic effects of adding maraviroc to suppressive antiretroviral therapy in individuals with suboptimal CD4+ T-cell recovery.

Cillo AR, Hilldorfer BB, Lalama CM, McKinnon JE, Coombs RW, Tenorio AR, Fox L, Gandhi RT, Ribaudo H, Currier JS, Gulick RM, Wilkin TJ, Mellors JW.

AIDS. 2015 Oct 23;29(16):2121-9. doi: 10.1097/QAD.0000000000000810.

9.

Simian Immunodeficiency Virus SIVsab Infection of Rhesus Macaques as a Model of Complete Immunological Suppression with Persistent Reservoirs of Replication-Competent Virus: Implications for Cure Research.

Ma D, Xu C, Cillo AR, Policicchio B, Kristoff J, Haret-Richter G, Mellors JW, Pandrea I, Apetrei C.

J Virol. 2015 Jun;89(11):6155-60. doi: 10.1128/JVI.00256-15. Epub 2015 Apr 1.

10.

Structured inquiry-based learning: Drosophila GAL4 enhancer trap characterization in an undergraduate laboratory course.

Dunne CR, Cillo AR, Glick DR, John K, Johnson C, Kanwal J, Malik BT, Mammano K, Petrovic S, Pfister W, Rascoe AS, Schrom D, Shapiro S, Simkins JW, Strauss D, Talai R, Tomtishen JP 3rd, Vargas J, Veloz T, Vogler TO, Clenshaw ME, Gordon-Hamm DT, Lee KL, Marin EC.

PLoS Biol. 2014 Dec 30;12(12):e1002030. doi: 10.1371/journal.pbio.1002030. eCollection 2014 Dec.

11.

Improved single-copy assays for quantification of persistent HIV-1 viremia in patients on suppressive antiretroviral therapy.

Cillo AR, Vagratian D, Bedison MA, Anderson EM, Kearney MF, Fyne E, Koontz D, Coffin JM, Piatak M Jr, Mellors JW.

J Clin Microbiol. 2014 Nov;52(11):3944-51. doi: 10.1128/JCM.02060-14. Epub 2014 Sep 3.

12.

Quantification of HIV-1 latency reversal in resting CD4+ T cells from patients on suppressive antiretroviral therapy.

Cillo AR, Sobolewski MD, Bosch RJ, Fyne E, Piatak M Jr, Coffin JM, Mellors JW.

Proc Natl Acad Sci U S A. 2014 May 13;111(19):7078-83. doi: 10.1073/pnas.1402873111. Epub 2014 Mar 31.

13.

Impact of chemotherapy for HIV-1 related lymphoma on residual viremia and cellular HIV-1 DNA in patients on suppressive antiretroviral therapy.

Cillo AR, Krishnan S, McMahon DK, Mitsuyasu RT, Para MF, Mellors JW.

PLoS One. 2014 Mar 17;9(3):e92118. doi: 10.1371/journal.pone.0092118. eCollection 2014.

14.

Macaque paneth cells express lymphoid chemokine CXCL13 and other antimicrobial peptides not previously described as expressed in intestinal crypts.

Lucero CM, Fallert Junecko B, Klamar CR, Sciullo LA, Berendam SJ, Cillo AR, Qin S, Sui Y, Sanghavi S, Murphey-Corb MA, Reinhart TA.

Clin Vaccine Immunol. 2013 Aug;20(8):1320-8. doi: 10.1128/CVI.00651-12. Epub 2013 Jun 26.

15.

Three distinct phases of HIV-1 RNA decay in treatment-naive patients receiving raltegravir-based antiretroviral therapy: ACTG A5248.

Andrade A, Rosenkranz SL, Cillo AR, Lu D, Daar ES, Jacobson JM, Lederman M, Acosta EP, Campbell T, Feinberg J, Flexner C, Mellors JW, Kuritzkes DR; AIDS Clinical Trials Group A5248 Team.

J Infect Dis. 2013 Sep;208(6):884-91. doi: 10.1093/infdis/jit272. Epub 2013 Jun 24.

16.

Plasma viremia and cellular HIV-1 DNA persist despite autologous hematopoietic stem cell transplantation for HIV-related lymphoma.

Cillo AR, Krishnan A, Mitsuyasu RT, McMahon DK, Li S, Rossi JJ, Zaia JA, Mellors JW.

J Acquir Immune Defic Syndr. 2013 Aug 1;63(4):438-41. doi: 10.1097/QAI.0b013e31828e6163.

17.

Ultrabithorax confers spatial identity in a context-specific manner in the Drosophila postembryonic ventral nervous system.

Marin EC, Dry KE, Alaimo DR, Rudd KT, Cillo AR, Clenshaw ME, Negre N, White KP, Truman JW.

Neural Dev. 2012 Sep 11;7:31. doi: 10.1186/1749-8104-7-31.

18.

New tools for quantifying HIV-1 reservoirs: plasma RNA single copy assays and beyond.

Hilldorfer BB, Cillo AR, Besson GJ, Bedison MA, Mellors JW.

Curr HIV/AIDS Rep. 2012 Mar;9(1):91-100. doi: 10.1007/s11904-011-0104-6. Review.

19.

THE CALORIC COST OF PLAYING HANDBALL.

BANISTER EW, RIBISL PM, PORTER GH, CILLO AR.

Res Q. 1964 Oct;35:236-40. No abstract available.

PMID:
14276361

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