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Items: 39

1.

High-Throughput Protein Analysis Using Negative Stain Electron Microscopy and 2D Classification.

Arthur CP, Ciferri C.

Methods Mol Biol. 2019;2025:477-485. doi: 10.1007/978-1-4939-9624-7_22.

PMID:
31267467
2.

Semiautomated Small-Scale Purification Method for High-Throughput Expression Analysis of Recombinant Proteins.

Kraft E, Franke Y, Heeringa K, Shriver S, Zilberleyb I, Kugel C, Dela Vega T, Wong A, Brillantes B, Ciferri C, Dutina G, Lee G, Lehoux I, Li ZR, Lior-Hoffmann L, Hwang J, Lonergan C, Martin L, Mortara K, Nguyen L, Payandeh J, Perez A, Sampang J, Singh L, Schroeder K, Tam C, Ti S, Win YN, Bowman K.

Methods Mol Biol. 2019;2025:51-68. doi: 10.1007/978-1-4939-9624-7_3.

PMID:
31267448
3.

Production, characterization, and in vivo half-life extension of polymeric IgA molecules in mice.

Lombana TN, Rajan S, Zorn JA, Mandikian D, Chen EC, Estevez A, Yip V, Bravo DD, Phung W, Farahi F, Viajar S, Lee S, Gill A, Sandoval W, Wang J, Ciferri C, Boswell CA, Matsumoto ML, Spiess C.

MAbs. 2019 Aug/Sep;11(6):1122-1138. doi: 10.1080/19420862.2019.1622940. Epub 2019 Jun 9.

4.

Visualizing the cellular route of entry of a cystine-knot peptide with Xfect transfection reagent by electron microscopy.

Gao X, De Mazière A, Iaea DB, Arthur CP, Klumperman J, Ciferri C, Hannoush RN.

Sci Rep. 2019 May 6;9(1):6907. doi: 10.1038/s41598-019-43285-5.

5.

Structural Basis of Nav1.7 Inhibition by a Gating-Modifier Spider Toxin.

Xu H, Li T, Rohou A, Arthur CP, Tzakoniati F, Wong E, Estevez A, Kugel C, Franke Y, Chen J, Ciferri C, Hackos DH, Koth CM, Payandeh J.

Cell. 2019 Feb 21;176(5):1238-1239. doi: 10.1016/j.cell.2019.01.047. No abstract available.

PMID:
30794776
6.

Structural basis of α-scorpion toxin action on Nav channels.

Clairfeuille T, Cloake A, Infield DT, Llongueras JP, Arthur CP, Li ZR, Jian Y, Martin-Eauclaire MF, Bougis PE, Ciferri C, Ahern CA, Bosmans F, Hackos DH, Rohou A, Payandeh J.

Science. 2019 Mar 22;363(6433). pii: eaav8573. doi: 10.1126/science.aav8573. Epub 2019 Feb 7.

PMID:
30733386
7.

Structural Basis of Nav1.7 Inhibition by a Gating-Modifier Spider Toxin.

Xu H, Li T, Rohou A, Arthur CP, Tzakoniati F, Wong E, Estevez A, Kugel C, Franke Y, Chen J, Ciferri C, Hackos DH, Koth CM, Payandeh J.

Cell. 2019 Feb 7;176(4):702-715.e14. doi: 10.1016/j.cell.2018.12.018. Epub 2019 Jan 17. Erratum in: Cell. 2019 Feb 21;176(5):1238-1239.

PMID:
30661758
8.

An Unbiased Screen for Human Cytomegalovirus Identifies Neuropilin-2 as a Central Viral Receptor.

Martinez-Martin N, Marcandalli J, Huang CS, Arthur CP, Perotti M, Foglierini M, Ho H, Dosey AM, Shriver S, Payandeh J, Leitner A, Lanzavecchia A, Perez L, Ciferri C.

Cell. 2018 Aug 23;174(5):1158-1171.e19. doi: 10.1016/j.cell.2018.06.028. Epub 2018 Jul 26.

9.

Cryo-EM in drug discovery: achievements, limitations and prospects.

Renaud JP, Chari A, Ciferri C, Liu WT, Rémigy HW, Stark H, Wiesmann C.

Nat Rev Drug Discov. 2018 Jul;17(7):471-492. doi: 10.1038/nrd.2018.77. Epub 2018 Jun 8. Review.

PMID:
29880918
10.

A Family of Vertebrate-Specific Polycombs Encoded by the LCOR/LCORL Genes Balance PRC2 Subtype Activities.

Conway E, Jerman E, Healy E, Ito S, Holoch D, Oliviero G, Deevy O, Glancy E, Fitzpatrick DJ, Mucha M, Watson A, Rice AM, Chammas P, Huang C, Pratt-Kelly I, Koseki Y, Nakayama M, Ishikura T, Streubel G, Wynne K, Hokamp K, McLysaght A, Ciferri C, Di Croce L, Cagney G, Margueron R, Koseki H, Bracken AP.

Mol Cell. 2018 May 3;70(3):408-421.e8. doi: 10.1016/j.molcel.2018.03.005. Epub 2018 Apr 5.

11.

Generalized enhanced suffix array construction in external memory.

Louza FA, Telles GP, Hoffmann S, Ciferri CDA.

Algorithms Mol Biol. 2017 Dec 7;12:26. doi: 10.1186/s13015-017-0117-9. eCollection 2017.

12.

Molecular characterization of human anti-hinge antibodies derived from single-cell cloning of normal human B cells.

Huang T, Mathieu M, Lee S, Wang X, Kee YS, Bevers JJ 3rd, Ciferri C, Estavez A, Wong M, Chiang NY, Nakamura G, Brezski RJ.

J Biol Chem. 2018 Jan 19;293(3):906-919. doi: 10.1074/jbc.RA117.000165. Epub 2017 Nov 30.

13.

Non-canonical reader modules of BAZ1A promote recovery from DNA damage.

Oppikofer M, Sagolla M, Haley B, Zhang HM, Kummerfeld SK, Sudhamsu J, Flynn EM, Bai T, Zhang J, Ciferri C, Cochran AG.

Nat Commun. 2017 Oct 11;8(1):862. doi: 10.1038/s41467-017-00866-0.

14.

Expansion of the ISWI chromatin remodeler family with new active complexes.

Oppikofer M, Bai T, Gan Y, Haley B, Liu P, Sandoval W, Ciferri C, Cochran AG.

EMBO Rep. 2017 Oct;18(10):1697-1706. doi: 10.15252/embr.201744011. Epub 2017 Aug 11.

15.

Corrigendum: A broadly protective therapeutic antibody against influenza B virus with two mechanisms of action.

Chai N, Swem LR, Park S, Nakamura G, Chiang N, Estevez A, Fong R, Kamen L, Kho E, Reichelt M, Lin Z, Chiu H, Skippington E, Modrusan Z, Stinson J, Xu M, Lupardus P, Ciferri C, Tan MW.

Nat Commun. 2017 May 25;8:15779. doi: 10.1038/ncomms15779.

16.

A broadly protective therapeutic antibody against influenza B virus with two mechanisms of action.

Chai N, Swem LR, Park S, Nakamura G, Chiang N, Estevez A, Fong R, Kamen L, Kho E, Reichelt M, Lin Z, Chiu H, Skippington E, Modrusan Z, Stinson J, Xu M, Lupardus P, Ciferri C, Tan MW.

Nat Commun. 2017 Jan 19;8:14234. doi: 10.1038/ncomms14234.

17.

GsdmD p30 elicited by caspase-11 during pyroptosis forms pores in membranes.

Aglietti RA, Estevez A, Gupta A, Ramirez MG, Liu PS, Kayagaki N, Ciferri C, Dixit VM, Dueber EC.

Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7858-63. doi: 10.1073/pnas.1607769113. Epub 2016 Jun 23.

18.

In Vitro Characterization of Human Cytomegalovirus-Targeting Therapeutic Monoclonal Antibodies LJP538 and LJP539.

Patel HD, Nikitin P, Gesner T, Lin JJ, Barkan DT, Ciferri C, Carfi A, Akbarnejad Yazdi T, Skewes-Cox P, Wiedmann B, Jarousse N, Zhong W, Feire A, Hebner CM.

Antimicrob Agents Chemother. 2016 Jul 22;60(8):4961-71. doi: 10.1128/AAC.00382-16. Print 2016 Aug.

19.

Expression, purification, and characterization of recombinant human and murine milk fat globule-epidermal growth factor-factor 8.

Castellanos ER, Ciferri C, Phung W, Sandoval W, Matsumoto ML.

Protein Expr Purif. 2016 Aug;124:10-22. doi: 10.1016/j.pep.2016.04.006. Epub 2016 Apr 19.

PMID:
27102803
20.

The Human Cytomegalovirus UL116 Gene Encodes an Envelope Glycoprotein Forming a Complex with gH Independently from gL.

Caló S, Cortese M, Ciferri C, Bruno L, Gerrein R, Benucci B, Monda G, Gentile M, Kessler T, Uematsu Y, Maione D, Lilja AE, Carfí A, Merola M.

J Virol. 2016 Apr 29;90(10):4926-38. doi: 10.1128/JVI.02517-15. Print 2016 May 15.

21.

Antigenic Characterization of the HCMV gH/gL/gO and Pentamer Cell Entry Complexes Reveals Binding Sites for Potently Neutralizing Human Antibodies.

Ciferri C, Chandramouli S, Leitner A, Donnarumma D, Cianfrocco MA, Gerrein R, Friedrich K, Aggarwal Y, Palladino G, Aebersold R, Norais N, Settembre EC, Carfi A.

PLoS Pathog. 2015 Oct 20;11(10):e1005230. doi: 10.1371/journal.ppat.1005230. eCollection 2015 Oct.

22.

Protein domain mapping by internal labeling and single particle electron microscopy.

Ciferri C, Lander GC, Nogales E.

J Struct Biol. 2015 Nov;192(2):159-62. doi: 10.1016/j.jsb.2015.09.016. Epub 2015 Sep 30.

23.

A similarity-based data warehousing environment for medical images.

Teixeira JW, Annibal LP, Felipe JC, Ciferri RR, Ciferri CD.

Comput Biol Med. 2015 Nov 1;66:190-208. doi: 10.1016/j.compbiomed.2015.08.019. Epub 2015 Sep 5.

24.

The trimeric serine protease HtrA1 forms a cage-like inhibition complex with an anti-HtrA1 antibody.

Ciferri C, Lipari MT, Liang WC, Estevez A, Hang J, Stawicki S, Wu Y, Moran P, Elliott M, Eigenbrot C, Katschke KJ, van Lookeren Campagne M, Kirchhofer D.

Biochem J. 2015 Dec 1;472(2):169-81. doi: 10.1042/BJ20150601. Epub 2015 Sep 18.

PMID:
26385991
25.

Structure of HCMV glycoprotein B in the postfusion conformation bound to a neutralizing human antibody.

Chandramouli S, Ciferri C, Nikitin PA, Caló S, Gerrein R, Balabanis K, Monroe J, Hebner C, Lilja AE, Settembre EC, Carfi A.

Nat Commun. 2015 Sep 14;6:8176. doi: 10.1038/ncomms9176.

26.

Expression of the human cytomegalovirus pentamer complex for vaccine use in a CHO system.

Hofmann I, Wen Y, Ciferri C, Schulze A, Fühner V, Leong M, Gerber A, Gerrein R, Nandi A, Lilja AE, Carfi A, Laux H.

Biotechnol Bioeng. 2015 Dec;112(12):2505-15. doi: 10.1002/bit.25670. Epub 2015 Jul 31.

PMID:
26058896
27.

A site of varicella-zoster virus vulnerability identified by structural studies of neutralizing antibodies bound to the glycoprotein complex gHgL.

Xing Y, Oliver SL, Nguyen T, Ciferri C, Nandi A, Hickman J, Giovani C, Yang E, Palladino G, Grose C, Uematsu Y, Lilja AE, Arvin AM, Carfí A.

Proc Natl Acad Sci U S A. 2015 May 12;112(19):6056-61. doi: 10.1073/pnas.1501176112. Epub 2015 Apr 27.

28.

Structural and biochemical studies of HCMV gH/gL/gO and Pentamer reveal mutually exclusive cell entry complexes.

Ciferri C, Chandramouli S, Donnarumma D, Nikitin PA, Cianfrocco MA, Gerrein R, Feire AL, Barnett SW, Lilja AE, Rappuoli R, Norais N, Settembre EC, Carfi A.

Proc Natl Acad Sci U S A. 2015 Feb 10;112(6):1767-72. doi: 10.1073/pnas.1424818112. Epub 2015 Jan 26.

29.

Enhanced expression of full-length human cytomegalovirus fusion protein in non-swelling baculovirus-infected cells with a minimal fed-batch strategy.

Patrone M, Carinhas N, Sousa MQ, Peixoto C, Ciferri C, Carfì A, Alves PM.

PLoS One. 2014 Mar 4;9(3):e90753. doi: 10.1371/journal.pone.0090753. eCollection 2014.

30.

Molecular architecture of human polycomb repressive complex 2.

Ciferri C, Lander GC, Maiolica A, Herzog F, Aebersold R, Nogales E.

Elife. 2012 Oct 30;1:e00005. doi: 10.7554/eLife.00005.

31.

Abnormal kinetochore-generated pulling forces from expressing a N-terminally modified Hec1.

Mattiuzzo M, Vargiu G, Totta P, Fiore M, Ciferri C, Musacchio A, Degrassi F.

PLoS One. 2011 Jan 28;6(1):e16307. doi: 10.1371/journal.pone.0016307.

32.

Structure and function of SWI/SNF chromatin remodeling complexes and mechanistic implications for transcription.

Tang L, Nogales E, Ciferri C.

Prog Biophys Mol Biol. 2010 Jun-Jul;102(2-3):122-8. doi: 10.1016/j.pbiomolbio.2010.05.001. Epub 2010 May 20. Review.

33.

Architecture and flexibility of the yeast Ndc80 kinetochore complex.

Wang HW, Long S, Ciferri C, Westermann S, Drubin D, Barnes G, Nogales E.

J Mol Biol. 2008 Nov 21;383(4):894-903. doi: 10.1016/j.jmb.2008.08.077. Epub 2008 Sep 5.

34.

Implications for kinetochore-microtubule attachment from the structure of an engineered Ndc80 complex.

Ciferri C, Pasqualato S, Screpanti E, Varetti G, Santaguida S, Dos Reis G, Maiolica A, Polka J, De Luca JG, De Wulf P, Salek M, Rappsilber J, Moores CA, Salmon ED, Musacchio A.

Cell. 2008 May 2;133(3):427-39. doi: 10.1016/j.cell.2008.03.020.

35.

Structural analysis of multiprotein complexes by cross-linking, mass spectrometry, and database searching.

Maiolica A, Cittaro D, Borsotti D, Sennels L, Ciferri C, Tarricone C, Musacchio A, Rappsilber J.

Mol Cell Proteomics. 2007 Dec;6(12):2200-11. Epub 2007 Oct 5.

36.

The Ndc80 complex: hub of kinetochore activity.

Ciferri C, Musacchio A, Petrovic A.

FEBS Lett. 2007 Jun 19;581(15):2862-9. Epub 2007 May 11. Review.

37.

Kinetochore microtubule dynamics and attachment stability are regulated by Hec1.

DeLuca JG, Gall WE, Ciferri C, Cimini D, Musacchio A, Salmon ED.

Cell. 2006 Dec 1;127(5):969-82.

38.

Architecture of the human ndc80-hec1 complex, a critical constituent of the outer kinetochore.

Ciferri C, De Luca J, Monzani S, Ferrari KJ, Ristic D, Wyman C, Stark H, Kilmartin J, Salmon ED, Musacchio A.

J Biol Chem. 2005 Aug 12;280(32):29088-95. Epub 2005 Jun 16.

39.

Mechanism of Aurora B activation by INCENP and inhibition by hesperadin.

Sessa F, Mapelli M, Ciferri C, Tarricone C, Areces LB, Schneider TR, Stukenberg PT, Musacchio A.

Mol Cell. 2005 Apr 29;18(3):379-91.

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