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Items: 12


Identification of Novel Protein Expression Changes Following Cisplatin Treatment and Application to Combination Therapy.

Stark AL, Madian AG, Williams SW, Chen V, Wing C, Hause RJ Jr, To LA, Gill AL, Myers JL, Gorsic LK, Ciaccio MF, White KP, Jones RB, Dolan ME.

J Proteome Res. 2017 Nov 3;16(11):4227-4236. doi: 10.1021/acs.jproteome.7b00576. Epub 2017 Sep 29.


Microwestern Arrays for Systems-Level Analysis of SH2 Domain-Containing Proteins.

Ciaccio MF, Jones RB.

Methods Mol Biol. 2017;1555:453-473. doi: 10.1007/978-1-4939-6762-9_27.


The DIONESUS algorithm provides scalable and accurate reconstruction of dynamic phosphoproteomic networks to reveal new drug targets.

Ciaccio MF, Chen VC, Jones RB, Bagheri N.

Integr Biol (Camb). 2015 Jul;7(7):776-91. doi: 10.1039/c5ib00065c.


A systems approach to integrative biology: an overview of statistical methods to elucidate association and architecture.

Ciaccio MF, Finkle JD, Xue AY, Bagheri N.

Integr Comp Biol. 2014 Jul;54(2):296-306. doi: 10.1093/icb/icu037. Epub 2014 May 9.


Enhanced prediction of Src homology 2 (SH2) domain binding potentials using a fluorescence polarization-derived c-Met, c-Kit, ErbB, and androgen receptor interactome.

Leung KK, Hause RJ Jr, Barkinge JL, Ciaccio MF, Chuu CP, Jones RB.

Mol Cell Proteomics. 2014 Jul;13(7):1705-23. doi: 10.1074/mcp.M113.034876. Epub 2014 Apr 12.


Comprehensive binary interaction mapping of SH2 domains via fluorescence polarization reveals novel functional diversification of ErbB receptors.

Hause RJ Jr, Leung KK, Barkinge JL, Ciaccio MF, Chuu CP, Jones RB.

PLoS One. 2012;7(9):e44471. doi: 10.1371/journal.pone.0044471. Epub 2012 Sep 4.


Caffeic acid phenethyl ester suppresses the proliferation of human prostate cancer cells through inhibition of p70S6K and Akt signaling networks.

Chuu CP, Lin HP, Ciaccio MF, Kokontis JM, Hause RJ Jr, Hiipakka RA, Liao S, Jones RB.

Cancer Prev Res (Phila). 2012 May;5(5):788-97. doi: 10.1158/1940-6207.CAPR-12-0004-T.


Systematic discovery of TLR signaling components delineates viral-sensing circuits.

Chevrier N, Mertins P, Artyomov MN, Shalek AK, Iannacone M, Ciaccio MF, Gat-Viks I, Tonti E, DeGrace MM, Clauser KR, Garber M, Eisenhaure TM, Yosef N, Robinson J, Sutton A, Andersen MS, Root DE, von Andrian U, Jones RB, Park H, Carr SA, Regev A, Amit I, Hacohen N.

Cell. 2011 Nov 11;147(4):853-67. doi: 10.1016/j.cell.2011.10.022.


Effect of complementary pathway blockade on efficacy of combination enzastaurin and rapamycin.

Liu J, Kuo WL, Seiwert TY, Lingen M, Ciaccio MF, Jones RB, Rosner MR, Cohen EE.

Head Neck. 2011 Dec;33(12):1774-82. doi: 10.1002/hed.21701. Epub 2011 Mar 24.


Systems analysis of EGF receptor signaling dynamics with microwestern arrays.

Ciaccio MF, Wagner JP, Chuu CP, Lauffenburger DA, Jones RB.

Nat Methods. 2010 Feb;7(2):148-55. doi: 10.1038/nmeth.1418. Epub 2010 Jan 24.


Systems-level analysis of ErbB4 signaling in breast cancer: a laboratory to clinical perspective.

Chuu CP, Chen RY, Barkinge JL, Ciaccio MF, Jones RB.

Mol Cancer Res. 2008 Jun;6(6):885-91. doi: 10.1158/1541-7786.MCR-07-0369. Review.


Cytosolic prion protein toxicity is independent of cellular prion protein expression and prion propagation.

Norstrom EM, Ciaccio MF, Rassbach B, Wollmann R, Mastrianni JA.

J Virol. 2007 Mar;81(6):2831-7. Epub 2006 Dec 20.

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