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Items: 1 to 20 of 76

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1.

Cellular checkpoint control using programmable sequential logic.

Andrews LB, Nielsen AAK, Voigt CA.

Science. 2018 Sep 21;361(6408). pii: eaap8987. doi: 10.1126/science.aap8987.

PMID:
30237327
2.

Engineered integrative and conjugative elements for efficient and inducible DNA transfer to undomesticated bacteria.

Brophy JAN, Triassi AJ, Adams BL, Renberg RL, Stratis-Cullum DN, Grossman AD, Voigt CA.

Nat Microbiol. 2018 Sep;3(9):1043-1053. doi: 10.1038/s41564-018-0216-5. Epub 2018 Aug 20.

PMID:
30127494
3.

Deep learning to predict the lab-of-origin of engineered DNA.

Nielsen AAK, Voigt CA.

Nat Commun. 2018 Aug 7;9(1):3135. doi: 10.1038/s41467-018-05378-z.

4.

Iterative algorithm-guided design of massive strain libraries, applied to itaconic acid production in yeast.

Young EM, Zhao Z, Gielesen BEM, Wu L, Benjamin Gordon D, Roubos JA, Voigt CA.

Metab Eng. 2018 Jul;48:33-43. doi: 10.1016/j.ymben.2018.05.002. Epub 2018 May 9.

PMID:
29753070
5.

Engineered promoters enable constant gene expression at any copy number in bacteria.

Segall-Shapiro TH, Sontag ED, Voigt CA.

Nat Biotechnol. 2018 Apr;36(4):352-358. doi: 10.1038/nbt.4111. Epub 2018 Mar 19.

PMID:
29553576
6.

Synthetic Biology Open Language Visual (SBOL Visual) Version 2.0.

Cox RS, Madsen C, McLaughlin J, Nguyen T, Roehner N, Bartley B, Bhatia S, Bissell M, Clancy K, Gorochowski T, Grünberg R, Luna A, Le Novère N, Pocock M, Sauro H, Sexton JT, Stan GB, Tabor JJ, Voigt CA, Zundel Z, Myers C, Beal J, Wipat A.

J Integr Bioinform. 2018 Mar 19;15(1). pii: /j/jib.2018.15.issue-1/jib-2017-0074/jib-2017-0074.xml. doi: 10.1515/jib-2017-0074.

7.

Genetic circuit characterization and debugging using RNA-seq.

Gorochowski TE, Espah Borujeni A, Park Y, Nielsen AA, Zhang J, Der BS, Gordon DB, Voigt CA.

Mol Syst Biol. 2017 Nov 9;13(11):952. doi: 10.15252/msb.20167461.

8.

Genetic Design via Combinatorial Constraint Specification.

Bhatia SP, Smanski MJ, Voigt CA, Densmore DM.

ACS Synth Biol. 2017 Nov 17;6(11):2130-2135. doi: 10.1021/acssynbio.7b00154. Epub 2017 Oct 4.

PMID:
28874044
9.

Balancing gene expression without library construction via a reusable sRNA pool.

Ghodasara A, Voigt CA.

Nucleic Acids Res. 2017 Jul 27;45(13):8116-8127. doi: 10.1093/nar/gkx530.

10.

Engineering RGB color vision into Escherichia coli.

Fernandez-Rodriguez J, Moser F, Song M, Voigt CA.

Nat Chem Biol. 2017 Jul;13(7):706-708. doi: 10.1038/nchembio.2390. Epub 2017 May 22.

PMID:
28530708
11.

Control of type III protein secretion using a minimal genetic system.

Song M, Sukovich DJ, Ciccarelli L, Mayr J, Fernandez-Rodriguez J, Mirsky EA, Tucker AC, Gordon DB, Marlovits TC, Voigt CA.

Nat Commun. 2017 May 9;8:14737. doi: 10.1038/ncomms14737.

12.

Formation of Nitrogenase NifDK Tetramers in the Mitochondria of Saccharomyces cerevisiae.

Burén S, Young EM, Sweeny EA, Lopez-Torrejón G, Veldhuizen M, Voigt CA, Rubio LM.

ACS Synth Biol. 2017 Jun 16;6(6):1043-1055. doi: 10.1021/acssynbio.6b00371. Epub 2017 Mar 3.

13.

Discovery of Reactive Microbiota-Derived Metabolites that Inhibit Host Proteases.

Guo CJ, Chang FY, Wyche TP, Backus KM, Acker TM, Funabashi M, Taketani M, Donia MS, Nayfach S, Pollard KS, Craik CS, Cravatt BF, Clardy J, Voigt CA, Fischbach MA.

Cell. 2017 Jan 26;168(3):517-526.e18. doi: 10.1016/j.cell.2016.12.021. Epub 2017 Jan 19.

14.

Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration.

Woodruff LBA, Gorochowski TE, Roehner N, Mikkelsen TS, Densmore D, Gordon DB, Nicol R, Voigt CA.

Nucleic Acids Res. 2017 Feb 17;45(3):1567-1568. doi: 10.1093/nar/gkx032. No abstract available.

15.

Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration.

Woodruff LBA, Gorochowski TE, Roehner N, Mikkelsen TS, Densmore D, Gordon DB, Nicol R, Voigt CA.

Nucleic Acids Res. 2017 Feb 17;45(3):1553-1565. doi: 10.1093/nar/gkw1226. Erratum in: Nucleic Acids Res. 2017 Feb 17;45(3):1567-1568.

16.

DNAplotlib: Programmable Visualization of Genetic Designs and Associated Data.

Der BS, Glassey E, Bartley BA, Enghuus C, Goodman DB, Gordon DB, Voigt CA, Gorochowski TE.

ACS Synth Biol. 2017 Jul 21;6(7):1115-1119. doi: 10.1021/acssynbio.6b00252. Epub 2016 Oct 27.

PMID:
27744689
17.

Post-translational control of genetic circuits using Potyvirus proteases.

Fernandez-Rodriguez J, Voigt CA.

Nucleic Acids Res. 2016 Jul 27;44(13):6493-502. doi: 10.1093/nar/gkw537. Epub 2016 Jun 13.

18.

Programming a Human Commensal Bacterium, Bacteroides thetaiotaomicron, to Sense and Respond to Stimuli in the Murine Gut Microbiota.

Mimee M, Tucker AC, Voigt CA, Lu TK.

Cell Syst. 2016 Mar 23;2(3):214. doi: 10.1016/j.cels.2016.03.007. Epub 2016 Mar 23. No abstract available.

19.

Double Dutch: A Tool for Designing Combinatorial Libraries of Biological Systems.

Roehner N, Young EM, Voigt CA, Gordon DB, Densmore D.

ACS Synth Biol. 2016 Jun 17;5(6):507-17. doi: 10.1021/acssynbio.5b00232. Epub 2016 May 3.

PMID:
27110633
20.

Genetic encoding of DNA nanostructures and their self-assembly in living bacteria.

Elbaz J, Yin P, Voigt CA.

Nat Commun. 2016 Apr 19;7:11179. doi: 10.1038/ncomms11179.

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