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Observer-independent assessment of psoriasis affected area using machine learning.

Meienberger N, Anzengruber F, Amruthalingam L, Christen R, Koller T, Maul JT, Pouly M, Djamei V, Navarini AA.

J Eur Acad Dermatol Venereol. 2019 Oct 8. doi: 10.1111/jdv.16002. [Epub ahead of print]


The many faced symbiotic snakelocks anemone (Anemonia viridis, Anthozoa): host and symbiont genetic differentiation among colour morphs.

Porro B, Mallien C, Hume BCC, Pey A, Aubin E, Christen R, Voolstra CR, Furla P, Forcioli D.

Heredity (Edinb). 2019 Sep 16. doi: 10.1038/s41437-019-0266-3. [Epub ahead of print]


Phase I Study of Emactuzumab Single Agent or in Combination with Paclitaxel in Patients with Advanced/Metastatic Solid Tumors Reveals Depletion of Immunosuppressive M2-like Macrophages.

Gomez-Roca CA, Italiano A, Le Tourneau C, Cassier PA, Toulmonde M, D'Angelo SP, Campone M, Weber KL, Loirat D, Cannarile MA, Jegg AM, Ries C, Christen R, Meneses-Lorente G, Jacob W, Klaman I, Ooi CH, Watson C, Wonde K, Reis B, Michielin F, Rüttinger D, Delord JP, Blay JY.

Ann Oncol. 2019 May 22. pii: mdz163. doi: 10.1093/annonc/mdz163. [Epub ahead of print]


Assessment of target-mediated uptake with immuno-PET: analysis of a phase I clinical trial with an anti-CD44 antibody.

Jauw YWS, Huisman MC, Nayak TK, Vugts DJ, Christen R, Naegelen VM, Ruettinger D, Heil F, Lammertsma AA, Verheul HMW, Hoekstra OS, van Dongen GAMS, Menke-van der Houven van Oordt CW.

EJNMMI Res. 2018 Jan 22;8(1):6. doi: 10.1186/s13550-018-0358-8.


Intestinal Bacterial Communities of Trypanosome-Infected and Uninfected Glossina palpalis palpalis from Three Human African Trypanomiasis Foci in Cameroon.

Jacob F, Melachio TT, Njitchouang GR, Gimonneau G, Njiokou F, Abate L, Christen R, Reveillaud J, Geiger A.

Front Microbiol. 2017 Aug 3;8:1464. doi: 10.3389/fmicb.2017.01464. eCollection 2017.


Soil prokaryotic communities in Chernobyl waste disposal trench T22 are modulated by organic matter and radionuclide contamination.

Theodorakopoulos N, Février L, Barakat M, Ortet P, Christen R, Piette L, Levchuk S, Beaugelin-Seiller K, Sergeant C, Berthomieu C, Chapon V.

FEMS Microbiol Ecol. 2017 Aug 1;93(8). doi: 10.1093/femsec/fix079.


Characterization of glutathione peroxidase diversity in the symbiotic sea anemone Anemonia viridis.

Pey A, Zamoum T, Christen R, Merle PL, Furla P.

Biochimie. 2017 Jan;132:94-101. doi: 10.1016/j.biochi.2016.10.016. Epub 2016 Nov 8.


First-in-human phase I clinical trial of RG7356, an anti-CD44 humanized antibody, in patients with advanced, CD44-expressing solid tumors.

Menke-van der Houven van Oordt CW, Gomez-Roca C, van Herpen C, Coveler AL, Mahalingam D, Verheul HM, van der Graaf WT, Christen R, Rüttinger D, Weigand S, Cannarile MA, Heil F, Brewster M, Walz AC, Nayak TK, Guarin E, Meresse V, Le Tourneau C.

Oncotarget. 2016 Nov 29;7(48):80046-80058. doi: 10.18632/oncotarget.11098.


Benthic protists: the under-charted majority.

Forster D, Dunthorn M, Mahé F, Dolan JR, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Edvardsen B, Egge E, Eikrem W, Gobet A, Kooistra WH, Logares R, Massana R, Montresor M, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Richards TA, Santini S, Sarno D, Siano R, Vaulot D, Wincker P, Zingone A, de Vargas C, Stoeck T.

FEMS Microbiol Ecol. 2016 Aug;92(8). pii: fiw120. doi: 10.1093/femsec/fiw120. Epub 2016 Jun 5.


Pelvic floor muscle reflex activity during coughing - an exploratory and reliability study.

Luginbuehl H, Baeyens JP, Kuhn A, Christen R, Oberli B, Eichelberger P, Radlinger L.

Ann Phys Rehabil Med. 2016 Dec;59(5-6):302-307. doi: 10.1016/ Epub 2016 Jun 2.


Phase I clinical study of RG7356, an anti-CD44 humanized antibody, in patients with acute myeloid leukemia.

Vey N, Delaunay J, Martinelli G, Fiedler W, Raffoux E, Prebet T, Gomez-Roca C, Papayannidis C, Kebenko M, Paschka P, Christen R, Guarin E, Bröske AM, Baehner M, Brewster M, Walz AC, Michielin F, Runza V, Meresse V, Recher C.

Oncotarget. 2016 May 31;7(22):32532-42. doi: 10.18632/oncotarget.8687.


Dynamics of Bacterial Community Composition in the Malaria Mosquito's Epithelia.

Tchioffo MT, Boissière A, Abate L, Nsango SE, Bayibéki AN, Awono-Ambéné PH, Christen R, Gimonneau G, Morlais I.

Front Microbiol. 2016 Jan 5;6:1500. doi: 10.3389/fmicb.2015.01500. eCollection 2015.


ERK1 and ERK2 present functional redundancy in tetrapods despite higher evolution rate of ERK1.

Buscà R, Christen R, Lovern M, Clifford AM, Yue JX, Goss GG, Pouysségur J, Lenormand P.

BMC Evol Biol. 2015 Sep 3;15:179. doi: 10.1186/s12862-015-0450-x.


CSF1R inhibition with emactuzumab in locally advanced diffuse-type tenosynovial giant cell tumours of the soft tissue: a dose-escalation and dose-expansion phase 1 study.

Cassier PA, Italiano A, Gomez-Roca CA, Le Tourneau C, Toulmonde M, Cannarile MA, Ries C, Brillouet A, Müller C, Jegg AM, Bröske AM, Dembowski M, Bray-French K, Freilinger C, Meneses-Lorente G, Baehner M, Harding R, Ratnayake J, Abiraj K, Gass N, Noh K, Christen RD, Ukarma L, Bompas E, Delord JP, Blay JY, Rüttinger D.

Lancet Oncol. 2015 Aug;16(8):949-56. doi: 10.1016/S1470-2045(15)00132-1. Epub 2015 Jul 12.


Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing.

Massana R, Gobet A, Audic S, Bass D, Bittner L, Boutte C, Chambouvet A, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Forn I, Forster D, Guillou L, Jaillon O, Kooistra WH, Logares R, Mahé F, Not F, Ogata H, Pawlowski J, Pernice MC, Probert I, Romac S, Richards T, Santini S, Shalchian-Tabrizi K, Siano R, Simon N, Stoeck T, Vaulot D, Zingone A, de Vargas C.

Environ Microbiol. 2015 Oct;17(10):4035-49. doi: 10.1111/1462-2920.12955. Epub 2015 Aug 4.


PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy.

Decelle J, Romac S, Stern RF, Bendif el M, Zingone A, Audic S, Guiry MD, Guillou L, Tessier D, Le Gall F, Gourvil P, Dos Santos AL, Probert I, Vaulot D, de Vargas C, Christen R.

Mol Ecol Resour. 2015 Nov;15(6):1435-45. doi: 10.1111/1755-0998.12401. Epub 2015 Apr 6.


Corrigendum: Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. nov.

Sawabe T, Ogura Y, Matsumura Y, Feng G, Amin AK, Mino S, Nakagawa S, Sawabe T, Kumar R, Fukui Y, Satomi M, Matsushima R, Thompson FL, Gomez Gil B, Christen R, Maruyama F, Kurokawa K, Hayashi T.

Front Microbiol. 2014 Nov 4;5:583. doi: 10.3389/fmicb.2014.00583. eCollection 2014.


Composition of Anopheles coluzzii and Anopheles gambiae microbiota from larval to adult stages.

Gimonneau G, Tchioffo MT, Abate L, Boissière A, Awono-Ambéné PH, Nsango SE, Christen R, Morlais I.

Infect Genet Evol. 2014 Dec;28:715-24. doi: 10.1016/j.meegid.2014.09.029. Epub 2014 Oct 2.


Patterns of rare and abundant marine microbial eukaryotes.

Logares R, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Gobet A, Kooistra WH, Mahé F, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Stoeck T, Santini S, Siano R, Wincker P, Zingone A, Richards TA, de Vargas C, Massana R.

Curr Biol. 2014 Apr 14;24(8):813-21. doi: 10.1016/j.cub.2014.02.050. Epub 2014 Apr 3.


Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. nov.

Sawabe T, Ogura Y, Matsumura Y, Feng G, Amin AR, Mino S, Nakagawa S, Sawabe T, Kumar R, Fukui Y, Satomi M, Matsushima R, Thompson FL, Gomez-Gil B, Christen R, Maruyama F, Kurokawa K, Hayashi T.

Front Microbiol. 2013 Dec 27;4:414. doi: 10.3389/fmicb.2013.00414. eCollection 2013. Erratum in: Front Microbiol. 2014;5:583.


Modulation of malaria infection in Anopheles gambiae mosquitoes exposed to natural midgut bacteria.

Tchioffo MT, Boissière A, Churcher TS, Abate L, Gimonneau G, Nsango SE, Awono-Ambéné PH, Christen R, Berry A, Morlais I.

PLoS One. 2013 Dec 6;8(12):e81663. doi: 10.1371/journal.pone.0081663. eCollection 2013. Erratum in: PLoS One. 2013;8(12). doi:10.1371/annotation/d8908395-a526-428c-b9ed-4430aaf8f7d7.


Exploration of Deinococcus-Thermus molecular diversity by novel group-specific PCR primers.

Theodorakopoulos N, Bachar D, Christen R, Alain K, Chapon V.

Microbiologyopen. 2013 Oct;2(5):862-72. doi: 10.1002/mbo3.119. Epub 2013 Aug 29.


Microbacterium lemovicicum sp. nov., a bacterium isolated from a natural uranium-rich soil.

Mondani L, Piette L, Christen R, Bachar D, Berthomieu C, Chapon V.

Int J Syst Evol Microbiol. 2013 Jul;63(Pt 7):2600-6. doi: 10.1099/ijs.0.048454-0. Epub 2012 Dec 21.


The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy.

Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, de Vargas C, Decelle J, Del Campo J, Dolan JR, Dunthorn M, Edvardsen B, Holzmann M, Kooistra WH, Lara E, Le Bescot N, Logares R, Mahé F, Massana R, Montresor M, Morard R, Not F, Pawlowski J, Probert I, Sauvadet AL, Siano R, Stoeck T, Vaulot D, Zimmermann P, Christen R.

Nucleic Acids Res. 2013 Jan;41(Database issue):D597-604. doi: 10.1093/nar/gks1160. Epub 2012 Nov 27.


Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests.

Hartmann M, Howes CG, VanInsberghe D, Yu H, Bachar D, Christen R, Henrik Nilsson R, Hallam SJ, Mohn WW.

ISME J. 2012 Dec;6(12):2199-218. doi: 10.1038/ismej.2012.84. Epub 2012 Aug 2. Erratum in: ISME J. 2012 Dec;6(12):2320.


Midgut microbiota of the malaria mosquito vector Anopheles gambiae and interactions with Plasmodium falciparum infection.

Boissière A, Tchioffo MT, Bachar D, Abate L, Marie A, Nsango SE, Shahbazkia HR, Awono-Ambene PH, Levashina EA, Christen R, Morlais I.

PLoS Pathog. 2012;8(5):e1002742. doi: 10.1371/journal.ppat.1002742. Epub 2012 May 31.

27. a website dedicated to gene sequences of potential bioterror bacteria and PCR primers used to amplify them.

Gardès J, Bachar D, Croce O, Christen R.

Microb Biotechnol. 2012 Sep;5(5):594-8. doi: 10.1111/j.1751-7915.2012.00353.x. Epub 2012 Jun 10.


In silico analyses of primers used to detect the pathogenicity genes of Vibrio cholerae.

Gardès J, Croce O, Christen R.

Microbes Environ. 2012;27(3):250-6. Epub 2012 May 17.


Position-controlled data acquisition embedded system for magnetic NDE of bridge stay cables.

Maldonado-Lopez R, Christen R.

Sensors (Basel). 2011;11(1):162-79. doi: 10.3390/s110100162. Epub 2010 Dec 24.


Influence of uranium on bacterial communities: a comparison of natural uranium-rich soils with controls.

Mondani L, Benzerara K, Carrière M, Christen R, Mamindy-Pajany Y, Février L, Marmier N, Achouak W, Nardoux P, Berthomieu C, Chapon V.

PLoS One. 2011;6(10):e25771. doi: 10.1371/journal.pone.0025771. Epub 2011 Oct 5.


Molecular biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil DNA extraction procedure.

Terrat S, Christen R, Dequiedt S, Lelièvre M, Nowak V, Regnier T, Bachar D, Plassart P, Wincker P, Jolivet C, Bispo A, Lemanceau P, Maron PA, Mougel C, Ranjard L.

Microb Biotechnol. 2012 Jan;5(1):135-41. doi: 10.1111/j.1751-7915.2011.00307.x. Epub 2011 Oct 12.


Validation and application of a PCR primer set to quantify fungal communities in the soil environment by real-time quantitative PCR.

Chemidlin Prévost-Bouré N, Christen R, Dequiedt S, Mougel C, Lelièvre M, Jolivet C, Shahbazkia HR, Guillou L, Arrouays D, Ranjard L.

PLoS One. 2011;6(9):e24166. doi: 10.1371/journal.pone.0024166. Epub 2011 Sep 8.


Ultra-deep sequencing of foraminiferal microbarcodes unveils hidden richness of early monothalamous lineages in deep-sea sediments.

Lecroq B, Lejzerowicz F, Bachar D, Christen R, Esling P, Baerlocher L, Østerås M, Farinelli L, Pawlowski J.

Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13177-82. doi: 10.1073/pnas.1018426108. Epub 2011 Jul 25.


Defining reference sequences for Nocardia species by similarity and clustering analyses of 16S rRNA gene sequence data.

Helal M, Kong F, Chen SC, Bain M, Christen R, Sintchenko V.

PLoS One. 2011;6(6):e19517. doi: 10.1371/journal.pone.0019517. Epub 2011 Jun 8.


Eukaryotic richness in the abyss: insights from pyrotag sequencing.

Pawlowski J, Christen R, Lecroq B, Bachar D, Shahbazkia HR, Amaral-Zettler L, Guillou L.

PLoS One. 2011 Apr 4;6(4):e18169. doi: 10.1371/journal.pone.0018169.


Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness.

Edgcomb V, Orsi W, Bunge J, Jeon S, Christen R, Leslin C, Holder M, Taylor GT, Suarez P, Varela R, Epstein S.

ISME J. 2011 Aug;5(8):1344-56. doi: 10.1038/ismej.2011.6. Epub 2011 Mar 10.


Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions.

Behnke A, Engel M, Christen R, Nebel M, Klein RR, Stoeck T.

Environ Microbiol. 2011 Feb;13(2):340-9. doi: 10.1111/j.1462-2920.2010.02332.x. Epub 2010 Sep 8.


Multi-locus analysis of human infective Cryptosporidium species and subtypes using ten novel genetic loci.

Bouzid M, Tyler KM, Christen R, Chalmers RM, Elwin K, Hunter PR.

BMC Microbiol. 2010 Aug 9;10:213. doi: 10.1186/1471-2180-10-213.


Erwinia piriflorinigrans sp. nov., a novel pathogen that causes necrosis of pear blossoms.

López MM, Roselló M, Llop P, Ferrer S, Christen R, Gardan L.

Int J Syst Evol Microbiol. 2011 Mar;61(Pt 3):561-7. doi: 10.1099/ijs.0.020479-0. Epub 2010 Apr 9.


Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water.

Stoeck T, Bass D, Nebel M, Christen R, Jones MD, Breiner HW, Richards TA.

Mol Ecol. 2010 Mar;19 Suppl 1:21-31. doi: 10.1111/j.1365-294X.2009.04480.x.


ScripTree: scripting phylogenetic graphics.

Chevenet F, Croce O, Hebrard M, Christen R, Berry V.

Bioinformatics. 2010 Apr 15;26(8):1125-6. doi: 10.1093/bioinformatics/btq086. Epub 2010 Mar 1.


Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities.

Stoeck T, Behnke A, Christen R, Amaral-Zettler L, Rodriguez-Mora MJ, Chistoserdov A, Orsi W, Edgcomb VP.

BMC Biol. 2009 Nov 3;7:72. doi: 10.1186/1741-7007-7-72.


Celeribacter neptunius gen. nov., sp. nov., a new member of the class Alphaproteobacteria.

Ivanova EP, Webb H, Christen R, Zhukova NV, Kurilenko VV, Kalinovskaya NI, Crawford RJ.

Int J Syst Evol Microbiol. 2010 Jul;60(Pt 7):1620-5. doi: 10.1099/ijs.0.014159-0. Epub 2009 Aug 28.


Winogradskyella exilis sp. nov., isolated from the starfish Stellaster equestris, and emended description of the genus Winogradskyella.

Ivanova EP, Christen R, Gorshkova NM, Zhukova NV, Kurilenko VV, Crawford RJ, Mikhailov VV.

Int J Syst Evol Microbiol. 2010 Jul;60(Pt 7):1577-80. doi: 10.1099/ijs.0.012476-0. Epub 2009 Aug 21.


Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina).

Kurilenko VV, Christen R, Zhukova NV, Kalinovskaya NI, Mikhailov VV, Crawford RJ, Ivanova EP.

Int J Syst Evol Microbiol. 2010 Apr;60(Pt 4):972-6. doi: 10.1099/ijs.0.013516-0. Epub 2009 Aug 6.


Pseudomonas brassicacearum subsp. neoaurantiaca subsp. nov., orange-pigmented bacteria isolated from soil and the rhizosphere of agricultural plants.

Ivanova EP, Christen R, Bizet C, Clermont D, Motreff L, Bouchier C, Zhukova NV, Crawford RJ, Kiprianova EA.

Int J Syst Evol Microbiol. 2009 Oct;59(Pt 10):2476-81. doi: 10.1099/ijs.0.009654-0. Epub 2009 Jul 21.


Multiple-locus variable-number tandem-repeat analysis for clonal identification of Vibrio parahaemolyticus isolates by using capillary electrophoresis.

Harth-Chu E, Espejo RT, Christen R, Guzmán CA, Höfle MG.

Appl Environ Microbiol. 2009 Jun;75(12):4079-88. doi: 10.1128/AEM.02729-08. Epub 2009 Apr 17.


Rhizobium alamii sp. nov., an exopolysaccharide-producing species isolated from legume and non-legume rhizospheres.

Berge O, Lodhi A, Brandelet G, Santaella C, Roncato MA, Christen R, Heulin T, Achouak W.

Int J Syst Evol Microbiol. 2009 Feb;59(Pt 2):367-72. doi: 10.1099/ijs.0.000521-0.


Primate-specific spliced PMCHL RNAs are non-protein coding in human and macaque tissues.

Schmieder S, Darré-Toulemonde F, Arguel MJ, Delerue-Audegond A, Christen R, Nahon JL.

BMC Evol Biol. 2008 Dec 9;8:330. doi: 10.1186/1471-2148-8-330.

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