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Biologically motivated asymmetric exclusion process: Interplay of congestion in RNA polymerase traffic and slippage of nascent transcript.

Ghosh S, Dutta A, Patra S, Sato J, Nishinari K, Chowdhury D.

Phys Rev E. 2019 May;99(5-1):052122. doi: 10.1103/PhysRevE.99.052122.


Effect of four different dentifrices applied by customized automated brushing device on enamel surface abrasion: An in vitro profilometric study.

Mazumdar P, Chowdhury D, Chatterjee S, Jajoo N.

J Conserv Dent. 2019 Mar-Apr;22(2):191-195. doi: 10.4103/JCD.JCD_392_18.


51-year old man with tingling, burning and progressive limb weakness.

Gupta A, Kumar PS, Puri V, Saran RK, Narang P, Chowdhury D.

Pract Neurol. 2018 Oct;18(5):382-388. doi: 10.1136/practneurol-2017-001877. Epub 2018 May 14.


Laying Tracks for Poison Delivery to "Kiss of Death": Search for Immune Synapse by Microtubules.

Chowdhury D.

Biophys J. 2019 Jun 4;116(11):2057-2059. doi: 10.1016/j.bpj.2019.05.001. Epub 2019 May 3. No abstract available.


Embryonal carcinoma testis with extensive metastasis and IVC thrombosis.

Shukla A, Chowdhury D, Mahendru V.

Indian J Pathol Microbiol. 2019 Apr-Jun;62(2):350-352. doi: 10.4103/IJPM.IJPM_63_18. No abstract available.


Is the child at risk? Cardiovascular remodelling in children born to diabetic mothers.

Hoodbhoy Z, Mohammed N, Aslam N, Fatima U, Ashiqali S, Rizvi A, Pascua C, Chowdhury D, Hasan BS.

Cardiol Young. 2019 Apr;29(4):467-474. doi: 10.1017/S1047951119000040. Epub 2019 Apr 3.


Ca2+/Calmodulin Binding to PSD-95 Downregulates Its Palmitoylation and AMPARs in Long-Term Depression.

Chowdhury D, Hell JW.

Front Synaptic Neurosci. 2019 Mar 12;11:6. doi: 10.3389/fnsyn.2019.00006. eCollection 2019.


Therapeutic impact of red blood cell transfusion on anemic outpatients: the RETRO study.

St Lezin E, Karafin MS, Bruhn R, Chowdhury D, Qu L, Bialkowski W, Merenda S, D'Andrea P, McCalla AL, Anderson L, Keating SM, Stone M, Snyder EL, Brambilla D, Murphy EL, Norris PJ, Hilton JF, Spencer BR, Kleinman S, Carson JL; NHLBI Recipient Epidemiology and Donor Evaluation Study (REDS)-III Program.

Transfusion. 2019 Jun;59(6):1934-1943. doi: 10.1111/trf.15249. Epub 2019 Mar 18.


p38 MAPK pathway-dependent SUMOylation of Elk-1 and phosphorylation of PIAS2 correlate with the downregulation of Elk-1 activity in heat-stressed HeLa cells.

Chowdhury D, Singh A, Gupta A, Tulsawani R, Meena RC, Chakrabarti A.

Cell Stress Chaperones. 2019 Mar;24(2):393-407. doi: 10.1007/s12192-019-00974-4. Epub 2019 Feb 19.


Role of Palmitoylation of Postsynaptic Proteins in Promoting Synaptic Plasticity.

Matt L, Kim K, Chowdhury D, Hell JW.

Front Mol Neurosci. 2019 Jan 31;12:8. doi: 10.3389/fnmol.2019.00008. eCollection 2019. Review.


Prolonged duration of early antibiotic therapy in extremely premature infants.

Greenberg RG, Chowdhury D, Hansen NI, Smith PB, Stoll BJ, Sánchez PJ, Das A, Puopolo KM, Mukhopadhyay S, Higgins RD, Cotten CM; Eunice Kennedy Shriver National Institute of Child Health and Human Development Neonatal Research Network.

Pediatr Res. 2019 Jun;85(7):994-1000. doi: 10.1038/s41390-019-0300-4. Epub 2019 Jan 22.


Identification of LIMK2 as a therapeutic target in castration resistant prostate cancer.

Nikhil K, Chang L, Viccaro K, Jacobsen M, McGuire C, Satapathy SR, Tandiary M, Broman MM, Cresswell G, He YJ, Sandusky GE, Ratliff TL, Chowdhury D, Shah K.

Cancer Lett. 2019 Apr 28;448:182-196. doi: 10.1016/j.canlet.2019.01.035. Epub 2019 Feb 1.


Primary Non-Hodgkin Lymphoma of Sphenoid Sinus Involving Cavernus Sinus and Clivus with Isolated 3rd Nerve Palsy.

Chowdhury D, Rahman A, Rashid MH, Chaurasia B, Kamal M, Barua KK.

Mymensingh Med J. 2018 Oct;27(4):888-893.


The A, B and C's of Silicone Breast Implants: Anaplastic Large Cell Lymphoma, Biofilm and Capsular Contracture.

Mempin M, Hu H, Chowdhury D, Deva A, Vickery K.

Materials (Basel). 2018 Nov 28;11(12). pii: E2393. doi: 10.3390/ma11122393. Review.


DYNLL1 binds to MRE11 to limit DNA end resection in BRCA1-deficient cells.

He YJ, Meghani K, Caron MC, Yang C, Ronato DA, Bian J, Sharma A, Moore J, Niraj J, Detappe A, Doench JG, Legube G, Root DE, D'Andrea AD, Drané P, De S, Konstantinopoulos PA, Masson JY, Chowdhury D.

Nature. 2018 Nov;563(7732):522-526. doi: 10.1038/s41586-018-0670-5. Epub 2018 Oct 31.


Transmission of Staphylococcus aureus from dry surface biofilm (DSB) via different types of gloves.

Tahir S, Chowdhury D, Legge M, Hu H, Whiteley G, Glasbey T, Deva AK, Vickery K.

Infect Control Hosp Epidemiol. 2019 Jan;40(1):60-64. doi: 10.1017/ice.2018.285. Epub 2018 Nov 13.


Effect of disinfectant formulation and organic soil on the efficacy of oxidizing disinfectants against biofilms.

Chowdhury D, Rahman A, Hu H, Jensen SO, Deva AK, Vickery K.

J Hosp Infect. 2018 Oct 26. pii: S0195-6701(18)30556-5. doi: 10.1016/j.jhin.2018.10.019. [Epub ahead of print]


Ultrafast manipulation of mirror domain walls in a charge density wave.

Zong A, Shen X, Kogar A, Ye L, Marks C, Chowdhury D, Rohwer T, Freelon B, Weathersby S, Li R, Yang J, Checkelsky J, Wang X, Gedik N.

Sci Adv. 2018 Oct 19;4(10):eaau5501. doi: 10.1126/sciadv.aau5501. eCollection 2018 Oct.


TORC1-signalling is down-regulated in Saccharomyces cerevisiae hsp30Δ cells by SNF1-dependent mechanisms.

Singh A, Chowdhury D, Gupta A, Meena RC, Chakrabarti A.

Yeast. 2018 Dec;35(12):653-667. doi: 10.1002/yea.3360. Epub 2018 Nov 7.


Impact of pre-eclampsia on the cardiovascular health of the offspring: a cohort study protocol.

Hoodbhoy Z, Hasan BS, Mohammed N, Chowdhury D.

BMJ Open. 2018 Sep 26;8(9):e024331. doi: 10.1136/bmjopen-2018-024331.


The Functional Influence of Breast Implant Outer Shell Morphology on Bacterial Attachment and Growth.

Jones P, Mempin M, Hu H, Chowdhury D, Foley M, Cooter R, Adams WP Jr, Vickery K, Deva AK.

Plast Reconstr Surg. 2018 Oct;142(4):837-849. doi: 10.1097/PRS.0000000000004801.


Structural conditions on complex networks for the Michaelis-Menten input-output response.

Wong F, Dutta A, Chowdhury D, Gunawardena J.

Proc Natl Acad Sci U S A. 2018 Sep 25;115(39):9738-9743. doi: 10.1073/pnas.1808053115. Epub 2018 Sep 7.


Vulnerabilities and risks of HIV infection among migrants in the Thane district, India.

Chowdhury D, Saravanamurthy PS, Chakrabartty A, Purohit S, Iyer SS, Agarwal A, Gopal KM, Mishra P.

Public Health. 2018 Nov;164:49-56. doi: 10.1016/j.puhe.2018.07.019. Epub 2018 Sep 3.


Clinical Outcomes and Modes of Death in Timothy Syndrome: A Multicenter International Study of a Rare Disorder.

Dufendach KA, Timothy K, Ackerman MJ, Blevins B, Pflaumer A, Etheridge S, Perry J, Blom NA, Temple J, Chowdhury D, Skinner JR, Johnsrude C, Bratincsak A, Bos JM, Shah M.

JACC Clin Electrophysiol. 2018 Apr;4(4):459-466. doi: 10.1016/j.jacep.2017.08.007. Epub 2017 Nov 6.


One-Pot Synthesis of Carbon Nanodots in an Organic Medium with Aggregation-Induced Emission Enhancement (AIEE): A Rationale for "Enzyme-Free" Detection of Cholesterol.

Gogoi N, Agarwal DS, Sehgal A, Chowdhury D, Sakhuja R.

ACS Omega. 2017 Jul 31;2(7):3816-3827. doi: 10.1021/acsomega.7b00643. Epub 2017 Jul 24.


Potential of serum microRNAs as biomarkers of radiation injury and tools for individualization of radiotherapy.

Tomasik B, Chałubińska-Fendler J, Chowdhury D, Fendler W.

Transl Res. 2018 Nov;201:71-83. doi: 10.1016/j.trsl.2018.06.001. Epub 2018 Jun 19. Review.


Consistent Condom Use by Married and Cohabiting Female Sex Workers in India: Investigating Relational Norms with Commercial Versus Intimate Partners.

Fehrenbacher AE, Chowdhury D, Jana S, Ray P, Dey B, Ghose T, Swendeman D.

AIDS Behav. 2018 Dec;22(12):4034-4047. doi: 10.1007/s10461-018-2219-x.


Effect of Magnetization on the Tunneling Anomaly in Compressible Quantum Hall States.

Chowdhury D, Skinner B, Lee PA.

Phys Rev Lett. 2018 Jun 29;120(26):266601. doi: 10.1103/PhysRevLett.120.266601.


"It's Awful When We Get It Wrong": An Exploratory Qualitative Study of Vocational Rehabilitation Counselors' Perspectives on Suicide.

Lund EM, Schultz JC, Thomas KB, Nadorff MR, Chowdhury D, Galbraith K.

Omega (Westport). 2018 Jan 1:30222818783933. doi: 10.1177/0030222818783933. [Epub ahead of print]


Mechanism of 53BP1 activity regulation by RNA-binding TIRR and a designer protein.

Botuyan MV, Cui G, Drané P, Oliveira C, Detappe A, Brault ME, Parnandi N, Chaubey S, Thompson JR, Bragantini B, Zhao D, Chapman JR, Chowdhury D, Mer G.

Nat Struct Mol Biol. 2018 Jul;25(7):591-600. doi: 10.1038/s41594-018-0083-z. Epub 2018 Jul 2.


Transfer of dry surface biofilm in the healthcare environment: the role of healthcare workers' hands as vehicles.

Chowdhury D, Tahir S, Legge M, Hu H, Prvan T, Johani K, Whiteley GS, Glasbey TO, Deva AK, Vickery K.

J Hosp Infect. 2018 Nov;100(3):e85-e90. doi: 10.1016/j.jhin.2018.06.021. Epub 2018 Jun 28.


Molecular force spectroscopy of kinetochore-microtubule attachment in silico: Mechanical signatures of an unusual catch bond and collective effects.

Ghanti D, Patra S, Chowdhury D.

Phys Rev E. 2018 May;97(5-1):052414. doi: 10.1103/PhysRevE.97.052414.


Machine learning from fetal flow waveforms to predict adverse perinatal outcomes: a study protocol.

Hoodbhoy Z, Hasan B, Jehan F, Bijnens B, Chowdhury D.

Gates Open Res. 2018 Feb 12;2:8. doi: 10.12688/gatesopenres.12796.1.


Dual HDAC and PI3K Inhibition Abrogates NFκB- and FOXM1-Mediated DNA Damage Response to Radiosensitize Pediatric High-Grade Gliomas.

Pal S, Kozono D, Yang X, Fendler W, Fitts W, Ni J, Alberta JA, Zhao J, Liu KX, Bian J, Truffaux N, Weiss WA, Resnick AC, Bandopadhayay P, Ligon KL, DuBois SG, Mueller S, Chowdhury D, Haas-Kogan DA.

Cancer Res. 2018 Jul 15;78(14):4007-4021. doi: 10.1158/0008-5472.CAN-17-3691. Epub 2018 May 14.


Secondary (Symptomatic) Trigeminal Autonomic Cephalalgia.

Chowdhury D.

Ann Indian Acad Neurol. 2018 Apr;21(Suppl 1):S57-S69. doi: 10.4103/aian.AIAN_16_18. Review.


Worst Headaches of the Humankind.

Chowdhury D.

Ann Indian Acad Neurol. 2018 Apr;21(Suppl 1):S1-S2. doi: 10.4103/aian.AIAN_20_18. No abstract available.


Mixed-valence insulators with neutral Fermi surfaces.

Chowdhury D, Sodemann I, Senthil T.

Nat Commun. 2018 May 2;9(1):1766. doi: 10.1038/s41467-018-04163-2.


Neonatal Morbidities among Moderately Preterm Infants with and without Exposure to Antenatal Corticosteroids.

Chawla S, Natarajan G, Chowdhury D, Das A, Walsh M, Bell EF, Laptook AR, Van Meurs K, D'Angio CT, Stoll BJ, DeMauro SB, Shankaran S.

Am J Perinatol. 2018 Oct;35(12):1213-1221. doi: 10.1055/s-0038-1642059. Epub 2018 Apr 27.


Multifaceted Impact of MicroRNA 493-5p on Genome-Stabilizing Pathways Induces Platinum and PARP Inhibitor Resistance in BRCA2-Mutated Carcinomas.

Meghani K, Fuchs W, Detappe A, Drané P, Gogola E, Rottenberg S, Jonkers J, Matulonis U, Swisher EM, Konstantinopoulos PA, Chowdhury D.

Cell Rep. 2018 Apr 3;23(1):100-111. doi: 10.1016/j.celrep.2018.03.038.


Serum microRNAs - potent biomarkers for radiation biodosimetry.

Tomasik B, Fendler W, Chowdhury D.

Oncotarget. 2018 Feb 2;9(18):14038-14039. doi: 10.18632/oncotarget.24381. eCollection 2018 Mar 6. No abstract available.


Short- and long-term freezing effects in a coastal (Lobaria virens) versus a widespread lichen (L. pulmonaria).

Solhaug KA, Chowdhury DP, Gauslaa Y.

Cryobiology. 2018 Jun;82:124-129. doi: 10.1016/j.cryobiol.2018.03.007. Epub 2018 Mar 21.


Homeostatic synaptic scaling: molecular regulators of synaptic AMPA-type glutamate receptors.

Chowdhury D, Hell JW.

F1000Res. 2018 Feb 28;7:234. doi: 10.12688/f1000research.13561.1. eCollection 2018. Review.


Mutational signatures reveal the role of RAD52 in p53-independent p21-driven genomic instability.

Galanos P, Pappas G, Polyzos A, Kotsinas A, Svolaki I, Giakoumakis NN, Glytsou C, Pateras IS, Swain U, Souliotis VL, Georgakilas AG, Geacintov N, Scorrano L, Lukas C, Lukas J, Livneh Z, Lygerou Z, Chowdhury D, Sørensen CS, Bartek J, Gorgoulis VG.

Genome Biol. 2018 Mar 16;19(1):37. doi: 10.1186/s13059-018-1401-9.


Functionally distinct and selectively phosphorylated GPCR subpopulations co-exist in a single cell.

Shen A, Nieves-Cintron M, Deng Y, Shi Q, Chowdhury D, Qi J, Hell JW, Navedo MF, Xiang YK.

Nat Commun. 2018 Mar 13;9(1):1050. doi: 10.1038/s41467-018-03459-7.


Multispecies exclusion process with fusion and fission of rods: A model inspired by intraflagellar transport.

Patra S, Chowdhury D.

Phys Rev E. 2018 Jan;97(1-1):012138. doi: 10.1103/PhysRevE.97.012138.


α-Actinin Anchors PSD-95 at Postsynaptic Sites.

Matt L, Kim K, Hergarden AC, Patriarchi T, Malik ZA, Park DK, Chowdhury D, Buonarati OR, Henderson PB, Gökçek Saraç Ç, Zhang Y, Mohapatra D, Horne MC, Ames JB, Hell JW.

Neuron. 2018 Mar 7;97(5):1094-1109.e9. doi: 10.1016/j.neuron.2018.01.036. Epub 2018 Feb 8.


Optimizing patient care and outcomes through the congenital heart center of the 21st century.

Anderson JB, Chowdhury D, Connor JA, Daniels CJ, Fleishman CE, Gaies M, Jacobs J, Kugler J, Madsen N, Beekman RH, Lihn S, Stewart-Huey K, Vincent R, Campbell R.

Congenit Heart Dis. 2018 Mar;13(2):167-180. doi: 10.1111/chd.12575. Epub 2018 Feb 5. Review.


EWS/FLI Confers Tumor Cell Synthetic Lethality to CDK12 Inhibition in Ewing Sarcoma.

Iniguez AB, Stolte B, Wang EJ, Conway AS, Alexe G, Dharia NV, Kwiatkowski N, Zhang T, Abraham BJ, Mora J, Kalev P, Leggett A, Chowdhury D, Benes CH, Young RA, Gray NS, Stegmaier K.

Cancer Cell. 2018 Feb 12;33(2):202-216.e6. doi: 10.1016/j.ccell.2017.12.009. Epub 2018 Jan 18.


A prototypical non-malignant epithelial model to study genome dynamics and concurrently monitor micro-RNAs and proteins in situ during oncogene-induced senescence.

Komseli ES, Pateras IS, Krejsgaard T, Stawiski K, Rizou SV, Polyzos A, Roumelioti FM, Chiourea M, Mourkioti I, Paparouna E, Zampetidis CP, Gumeni S, Trougakos IP, Pefani DE, O'Neill E, Gagos S, Eliopoulos AG, Fendler W, Chowdhury D, Bartek J, Gorgoulis VG.

BMC Genomics. 2018 Jan 10;19(1):37. doi: 10.1186/s12864-017-4375-1.


Contemporary Risk Factors and Outcomes of Transfusion-Associated Circulatory Overload.

Roubinian NH, Hendrickson JE, Triulzi DJ, Gottschall JL, Michalkiewicz M, Chowdhury D, Kor DJ, Looney MR, Matthay MA, Kleinman SH, Brambilla D, Murphy EL; National Heart, Lung, and Blood Institute (NHLBI) Recipient Epidemiology and Donor Evaluation Study-III (REDS-III).

Crit Care Med. 2018 Apr;46(4):577-585. doi: 10.1097/CCM.0000000000002948.

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