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Integrating multiple genomic technologies to investigate an outbreak of carbapenemase-producing Enterobacter hormaechei.

Roberts LW, Harris PNA, Forde BM, Ben Zakour NL, Catchpoole E, Stanton-Cook M, Phan MD, Sidjabat HE, Bergh H, Heney C, Gawthorne JA, Lipman J, Allworth A, Chan KG, Chong TM, Yin WF, Schembri MA, Paterson DL, Beatson SA.

Nat Commun. 2020 Jan 24;11(1):466. doi: 10.1038/s41467-019-14139-5.


High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing.

Stroehlein AJ, Korhonen PK, Chong TM, Lim YL, Chan KG, Webster B, Rollinson D, Brindley PJ, Gasser RB, Young ND.

Gigascience. 2019 Sep 1;8(9). pii: giz108. doi: 10.1093/gigascience/giz108.


Population dynamics of an Escherichia coli ST131 lineage during recurrent urinary tract infection.

Forde BM, Roberts LW, Phan MD, Peters KM, Fleming BA, Russell CW, Lenherr SM, Myers JB, Barker AP, Fisher MA, Chong TM, Yin WF, Chan KG, Schembri MA, Mulvey MA, Beatson SA.

Nat Commun. 2019 Aug 13;10(1):3643. doi: 10.1038/s41467-019-11571-5.


Genomic analyses of two Alteromonas stellipolaris strains reveal traits with potential biotechnological applications.

Torres M, Hong KW, Chong TM, Reina JC, Chan KG, Dessaux Y, Llamas I.

Sci Rep. 2019 Feb 4;9(1):1215. doi: 10.1038/s41598-018-37720-2.


Complete Chromosome and Plasmid Sequences of Two Plant Pathogens, Dickeya solani Strains D s0432-1 and PPO 9019.

Khayi S, Blin P, Chong TM, Chan KG, Faure D.

Genome Announc. 2018 Apr 26;6(17). pii: e00233-18. doi: 10.1128/genomeA.00233-18.


Complete Genome Sequences of the Plant Pathogens Dickeya solani RNS and Dickeya dianthicola RNS04.9.

Khayi S, Blin P, Chong TM, Robic K, Chan KG, Faure D.

Genome Announc. 2018 Jan 25;6(4). pii: e01447-17. doi: 10.1128/genomeA.01447-17.


The complete genome sequence of Ensifer meliloti strain CCMM B554 (FSM-MA), a highly effective nitrogen-fixing microsymbiont of Medicago truncatula Gaertn.

Nagymihály M, Vásarhelyi BM, Barrière Q, Chong TM, Bálint B, Bihari P, Hong KW, Horváth B, Ibijbijen J, Amar M, Farkas A, Kondorosi É, Chan KG, Gruber V, Ratet P, Mergaert P, Kereszt A.

Stand Genomic Sci. 2017 Dec 13;12:75. doi: 10.1186/s40793-017-0298-3. eCollection 2017.


Modifications in the pmrB gene are the primary mechanism for the development of chromosomally encoded resistance to polymyxins in uropathogenic Escherichia coli.

Phan MD, Nhu NTK, Achard MES, Forde BM, Hong KW, Chong TM, Yin WF, Chan KG, West NP, Walker MJ, Paterson DL, Beatson SA, Schembri MA.

J Antimicrob Chemother. 2017 Oct 1;72(10):2729-2736. doi: 10.1093/jac/dkx204.


Genome-Wide Discovery of Genes Required for Capsule Production by Uropathogenic Escherichia coli.

Goh KGK, Phan MD, Forde BM, Chong TM, Yin WF, Chan KG, Ulett GC, Sweet MJ, Beatson SA, Schembri MA.

mBio. 2017 Oct 24;8(5). pii: e01558-17. doi: 10.1128/mBio.01558-17.


Complete Genome Sequence of Streptomyces sp. TN58, a Producer of Acyl Alpha-l-Rhamnopyranosides.

Najah S, Chong TM, Gerbaud C, Chan KG, Mellouli L, Pernodet JL.

Genome Announc. 2017 Aug 24;5(34). pii: e00828-17. doi: 10.1128/genomeA.00828-17.


Phenotypic and genomic survey on organic acid utilization profile of Pseudomonas mendocina strain S5.2, a vineyard soil isolate.

Chong TM, Chen JW, See-Too WS, Yu CY, Ang GY, Lim YL, Yin WF, Grandclément C, Faure D, Dessaux Y, Chan KG.

AMB Express. 2017 Dec;7(1):138. doi: 10.1186/s13568-017-0437-7. Epub 2017 Jun 26.


Complete genome sequencing revealed novel genetic contexts of the mcr-1 gene in Escherichia coli strains.

Yu CY, Ang GY, Chong TM, Chin PS, Ngeow YF, Yin WF, Chan KG.

J Antimicrob Chemother. 2017 Apr 1;72(4):1253-1255. doi: 10.1093/jac/dkw541. No abstract available.


Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222T.

Khayi S, Blin P, Chong TM, Chan KG, Faure D.

Stand Genomic Sci. 2016 Nov 29;11:87. eCollection 2016.


Identification of IncA/C Plasmid Replication and Maintenance Genes and Development of a Plasmid Multilocus Sequence Typing Scheme.

Hancock SJ, Phan MD, Peters KM, Forde BM, Chong TM, Yin WF, Chan KG, Paterson DL, Walsh TR, Beatson SA, Schembri MA.

Antimicrob Agents Chemother. 2017 Jan 24;61(2). pii: e01740-16. doi: 10.1128/AAC.01740-16. Print 2017 Feb.


Comprehensive genomic and phenotypic metal resistance profile of Pseudomonas putida strain S13.1.2 isolated from a vineyard soil.

Chong TM, Yin WF, Chen JW, Mondy S, Grandclément C, Faure D, Dessaux Y, Chan KG.

AMB Express. 2016 Dec;6(1):95. doi: 10.1186/s13568-016-0269-x. Epub 2016 Oct 12.


Transfer of the potato plant isolates of Pectobacterium wasabiae to Pectobacterium parmentieri sp. nov.

Khayi S, Cigna J, Chong TM, Quêtu-Laurent A, Chan KG, Hélias V, Faure D.

Int J Syst Evol Microbiol. 2016 Dec;66(12):5379-5383. doi: 10.1099/ijsem.0.001524. Epub 2016 Sep 26.


Pseudomonas lini Strain ZBG1 Revealed Carboxylic Acid Utilization and Copper Resistance Features Required for Adaptation to Vineyard Soil Environment: A Draft Genome Analysis.

Chan KG, Chong TM, Adrian TG, Kher HL, Grandclément C, Faure D, Yin WF, Dessaux Y, Hong KW.

J Genomics. 2016 Aug 5;4:26-8. doi: 10.7150/jgen.16146. eCollection 2016.


Draft Genome of Multidrug-Resistant Klebsiella pneumoniae 223/14 Carrying KPC-6, Isolated from a General Hospital in Malaysia.

Ahmad N, Chong TM, Hashim R, Shukor S, Yin WF, Chan KG.

J Genomics. 2015 Nov 16;3:97-8. doi: 10.7150/jgen.13910. eCollection 2015.


Whole-Genome Sequence of Stenotrophomonas maltophilia ZBG7B Reveals Its Biotechnological Potential.

Chan KG, Chong TM, Adrian TG, Kher HL, Hong KW, Grandclément C, Faure D, Yin WF, Dessaux Y.

Genome Announc. 2015 Dec 10;3(6). pii: e01442-15. doi: 10.1128/genomeA.01442-15.


Lineage-Specific Methyltransferases Define the Methylome of the Globally Disseminated Escherichia coli ST131 Clone.

Forde BM, Phan MD, Gawthorne JA, Ashcroft MM, Stanton-Cook M, Sarkar S, Peters KM, Chan KG, Chong TM, Yin WF, Upton M, Schembri MA, Beatson SA.

mBio. 2015 Nov 17;6(6):e01602-15. doi: 10.1128/mBio.01602-15.


Stepwise evolution of pandrug-resistance in Klebsiella pneumoniae.

Zowawi HM, Forde BM, Alfaresi M, Alzarouni A, Farahat Y, Chong TM, Yin WF, Chan KG, Li J, Schembri MA, Beatson SA, Paterson DL.

Sci Rep. 2015 Oct 19;5:15082. doi: 10.1038/srep15082.


Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani.

Khayi S, Blin P, Pédron J, Chong TM, Chan KG, Moumni M, Hélias V, Van Gijsegem F, Faure D.

BMC Genomics. 2015 Oct 14;16:788. doi: 10.1186/s12864-015-1997-z.


Antibiotic Resistant and Virulence Determinants of Staphylococcus haemolyticus C10A as Revealed by Whole Genome Sequencing.

Chan KG, Ng KT, Chong TM, Pang YK, Kamarulzaman A, Yin WF, Tee KK.

J Genomics. 2015 Jun 3;3:72-4. doi: 10.7150/jgen.12574. eCollection 2015.


Genome Anatomy of Streptococcus parasanguinis Strain C1A, Isolated from a Patient with Acute Exacerbation of Chronic Obstructive Pulmonary Disease, Reveals Unusual Genomic Features.

Chan KG, Ng KT, Pang YK, Chong TM, Kamarulzaman A, Yin WF, Tee KK.

Genome Announc. 2015 May 28;3(3). pii: e00541-15. doi: 10.1128/genomeA.00541-15.


Core genome and plasmidome of the quorum-quenching bacterium Rhodococcus erythropolis.

Kwasiborski A, Mondy S, Chong TM, Chan KG, Beury-Cirou A, Faure D.

Genetica. 2015 Apr;143(2):253-61. doi: 10.1007/s10709-015-9827-4. Epub 2015 Feb 13.


Molecular analysis of asymptomatic bacteriuria Escherichia coli strain VR50 reveals adaptation to the urinary tract by gene acquisition.

Beatson SA, Ben Zakour NL, Totsika M, Forde BM, Watts RE, Mabbett AN, Szubert JM, Sarkar S, Phan MD, Peters KM, Petty NK, Alikhan NF, Sullivan MJ, Gawthorne JA, Stanton-Cook M, Nhu NT, Chong TM, Yin WF, Chan KG, Hancock V, Ussery DW, Ulett GC, Schembri MA.

Infect Immun. 2015 May;83(5):1749-64. doi: 10.1128/IAI.02810-14. Epub 2015 Feb 9.


Transcriptome of the quorum-sensing signal-degrading Rhodococcus erythropolis responds differentially to virulent and avirulent Pectobacterium atrosepticum.

Kwasiborski A, Mondy S, Chong TM, Barbey C, Chan KG, Beury-Cirou A, Latour X, Faure D.

Heredity (Edinb). 2015 May;114(5):476-84. doi: 10.1038/hdy.2014.121. Epub 2015 Jan 14.


Non-antibiotic quorum sensing inhibitors acting against N-acyl homoserine lactone synthase as druggable target.

Chang CY, Krishnan T, Wang H, Chen Y, Yin WF, Chong YM, Tan LY, Chong TM, Chan KG.

Sci Rep. 2014 Nov 28;4:7245. doi: 10.1038/srep07245.


Prevalence of unclassified bacteria in tropical coastal waters of malaysia revealed by metagenomic approach.

Chan KG, Chong TM.

Genome Announc. 2014 May 8;2(3). pii: e00419-14. doi: 10.1128/genomeA.00419-14.


CD4 T-cell memory responses to viral infections of humans show pronounced immunodominance independent of duration or viral persistence.

Jing L, Schiffer JT, Chong TM, Bruckner JJ, Davies DH, Felgner PL, Haas J, Wald A, Verjans GM, Koelle DM.

J Virol. 2013 Mar;87(5):2617-27. doi: 10.1128/JVI.03047-12. Epub 2012 Dec 19.


Heavy-metal resistance of a France vineyard soil bacterium, Pseudomonas mendocina strain S5.2, revealed by whole-genome sequencing.

Chong TM, Yin WF, Mondy S, Grandclément C, Dessaux Y, Chan KG.

J Bacteriol. 2012 Nov;194(22):6366. doi: 10.1128/JB.01702-12.


Characterization of quorum sensing and quorum quenching soil bacteria isolated from Malaysian tropical montane forest.

Chong TM, Koh CL, Sam CK, Choo YM, Yin WF, Chan KG.

Sensors (Basel). 2012;12(4):4846-59. doi: 10.3390/s120404846. Epub 2012 Apr 13.


Cross-presentation and genome-wide screening reveal candidate T cells antigens for a herpes simplex virus type 1 vaccine.

Jing L, Haas J, Chong TM, Bruckner JJ, Dann GC, Dong L, Marshak JO, McClurkan CL, Yamamoto TN, Bailer SM, Laing KJ, Wald A, Verjans GM, Koelle DM.

J Clin Invest. 2012 Feb;122(2):654-73. doi: 10.1172/JCI60556. Epub 2012 Jan 3. Erratum in: J Clin Invest. 2012 Aug 1;122(8):3024.


ORFeome approach to the clonal, HLA allele-specific CD4 T-cell response to a complex pathogen in humans.

Jing L, McCaughey SM, Davies DH, Chong TM, Felgner PL, De Rosa SC, Wilson CB, Koelle DM.

J Immunol Methods. 2009 Aug 15;347(1-2):36-45. doi: 10.1016/j.jim.2009.05.011. Epub 2009 Jun 9.


An extremely diverse CD4 response to vaccinia virus in humans is revealed by proteome-wide T-cell profiling.

Jing L, Davies DH, Chong TM, Chun S, McClurkan CL, Huang J, Story BT, Molina DM, Hirst S, Felgner PL, Koelle DM.

J Virol. 2008 Jul;82(14):7120-34. doi: 10.1128/JVI.00453-08. Epub 2008 May 14. Erratum in: J Virol. 2009 Mar;83(5):2404.


Dominance and diversity in the primary human CD4 T cell response to replication-competent vaccinia virus.

Jing L, Chong TM, Byrd B, McClurkan CL, Huang J, Story BT, Dunkley KM, Aldaz-Carroll L, Eisenberg RJ, Cohen GH, Kwok WW, Sette A, Koelle DM.

J Immunol. 2007 May 15;178(10):6374-86.


Diversity in the acute CD8 T cell response to vaccinia virus in humans.

Jing L, Chong TM, McClurkan CL, Huang J, Story BT, Koelle DM.

J Immunol. 2005 Dec 1;175(11):7550-9. Erratum in: J Immunol. 2007 Aug 15;179(4):2659.


Hepatic PTP-1B expression regulates the assembly and secretion of apolipoprotein B-containing lipoproteins: evidence from protein tyrosine phosphatase-1B overexpression, knockout, and RNAi studies.

Qiu W, Avramoglu RK, Dubé N, Chong TM, Naples M, Au C, Sidiropoulos KG, Lewis GF, Cohn JS, Tremblay ML, Adeli K.

Diabetes. 2004 Dec;53(12):3057-66.


The placebo in the practice of medicine.

Chong TM.

Int J Psychosom. 1987;34(2):25-30. No abstract available.


The management of bronchial asthma.

Chong TM.

J Asthma Res. 1977 Jan;14(2):73-89. No abstract available.


Medical hypnosis.

Chong TM.

Nurs J Singapore. 1975 May;15(1):37-9. No abstract available.


Pattern of bronchial asthma in Singapore.

Chong TM.

Singapore Med J. 1972 Jun;13(3):154-60. No abstract available.


Psychological factors in bronchial asthma.

Chong TM.

J Singapore Paediatr Soc. 1972 Apr;14(1):38-47. No abstract available.


The value of hypnotherapy as an adjunct in the treatment of bronchial asthma.

Chong TM.

Singapore Med J. 1969 Sep;10(3):182-6. No abstract available.


The use of hypnosis in the management of patients with cancer.

Chong TM.

Singapore Med J. 1968 Sep;9(3):211-4. No abstract available.


Epidemic Koro in Singapore.

Chong TM.

Br Med J. 1968 Mar 9;1(5592):640-1. No abstract available.


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