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Complete Genomic Sequence of the Thermophilic and Hydrogenotrophic Methanogen Methanothermobacter sp. Strain KEPCO-1.

Jeon BS, Kim H, Go YW, Kim YG, Joo JS, Choi O, Sang BI.

Microbiol Resour Announc. 2020 Jan 2;9(1). pii: e01034-19. doi: 10.1128/MRA.01034-19.


Simple and economical biosensors for distinguishing Agrobacterium-mediated plant galls from nematode-mediated root knots.

Choi O, Bae J, Kang B, Lee Y, Kim S, Fuqua C, Kim J.

Sci Rep. 2019 Nov 29;9(1):17961. doi: 10.1038/s41598-019-54568-2.


Pilot-scale demonstration of nitrogen recovery in the form of ammonium phosphate (AP) from anaerobic digestate.

Dong D, Choi OK, Lee K, Lee JW.

Bioresour Technol. 2020 Feb;297:122392. doi: 10.1016/j.biortech.2019.122392. Epub 2019 Nov 11.


Colorectal Cancer Therapy Using a Pediococcus pentosaceus SL4 Drug Delivery System Secreting Lactic Acid Bacteria-Derived Protein p8.

An BC, Ryu Y, Yoon YS, Choi O, Park HJ, Kim TY, Kim SI, Kim BK, Chung MJ.

Mol Cells. 2019 Nov 30;42(11):755-762. doi: 10.14348/molcells.2019.0064.


Inhibition of Salmonella enterica growth by competitive exclusion during early alfalfa sprout development using a seed-dwelling Erwinia persicina strain EUS78.

Kim WI, Choi SY, Han I, Cho SK, Lee Y, Kim S, Kang B, Choi O, Kim J.

Int J Food Microbiol. 2020 Jan 2;312:108374. doi: 10.1016/j.ijfoodmicro.2019.108374. Epub 2019 Oct 18.


Engineered nanoparticles for systemic siRNA delivery to malignant brain tumours.

Karlsson J, Rui Y, Kozielski KL, Placone AL, Choi O, Tzeng SY, Kim J, Keyes JJ, Bogorad MI, Gabrielson K, Guerrero-Cazares H, Quiñones-Hinojosa A, Searson PC, Green JJ.

Nanoscale. 2019 Nov 14;11(42):20045-20057. doi: 10.1039/c9nr04795f. Epub 2019 Oct 15.


Evaluation of double network hydrogel of poloxamer-heparin/gellan gum for bone marrow stem cells delivery carrier.

Choi JH, Choi OK, Lee J, Noh J, Lee S, Park A, Rim MA, Reis RL, Khang G.

Colloids Surf B Biointerfaces. 2019 Sep 1;181:879-889. doi: 10.1016/j.colsurfb.2019.06.041. Epub 2019 Jun 19.


Relationships between the diabetes awareness and clinical indices/nutrient intakes in Korean adults: Based on the 2012-2013 Korea National Health and Nutrition Examination Survey Data.

Lee S, Park H, Lee Y, Choi O, Kim J, Gray HL, Song K.

Nutr Res Pract. 2019 Jun;13(3):240-246. doi: 10.4162/nrp.2019.13.3.240. Epub 2019 May 31.


Multi-Cue-Based Circle Detection and Its Application to Robust Extrinsic Calibration of RGB-D Cameras.

Kwon YC, Jang JW, Hwang Y, Choi O.

Sensors (Basel). 2019 Mar 29;19(7). pii: E1539. doi: 10.3390/s19071539.


Direct differentiation of bone marrow mononucleated cells into insulin producing cells using pancreatic β-cell-derived components.

Oh JE, Choi OK, Park HS, Jung HS, Ryu SJ, Lee YD, Lee SA, Chung SS, Choi EY, Lee DS, Gho YS, Lee H, Park KS.

Sci Rep. 2019 Mar 29;9(1):5343. doi: 10.1038/s41598-019-41823-9.


Simultaneous production of methane and acetate by thermophilic mixed culture from carbon dioxide in bioelectrochemical system.

Song H, Choi O, Pandey A, Kim YG, Joo JS, Sang BI.

Bioresour Technol. 2019 Jun;281:474-479. doi: 10.1016/j.biortech.2019.02.115. Epub 2019 Feb 25.


Methane utilization in aerobic methane oxidation coupled to denitrification (AME-D): theoretical estimation and effect of hydraulic retention time (HRT).

Lee K, Choi OK, Kim Y, Park J, Lee JW.

Biodegradation. 2019 Jun;30(2-3):101-112. doi: 10.1007/s10532-019-09869-8. Epub 2019 Feb 5.


Effects of nanoscale zero valent iron (nZVI) concentration on the biochemical conversion of gaseous carbon dioxide (CO2) into methane (CH4).

Dong D, Aleta P, Zhao X, Choi OK, Kim S, Lee JW.

Bioresour Technol. 2019 Mar;275:314-320. doi: 10.1016/j.biortech.2018.12.075. Epub 2018 Dec 23.


Aversion center blackening of muskmelon fruit caused by Pseudomonas oryzihabitans, an opportunistic pathogen of humans and warm-blooded animals.

Choi O, Lee Y, Kang B, Bae J, Kim S, Kim J.

Int J Food Microbiol. 2019 Feb 16;291:1-4. doi: 10.1016/j.ijfoodmicro.2018.11.003. Epub 2018 Nov 6.


Insulin Receptor-Mediated Stimulation Boosts T Cell Immunity during Inflammation and Infection.

Tsai S, Clemente-Casares X, Zhou AC, Lei H, Ahn JJ, Chan YT, Choi O, Luck H, Woo M, Dunn SE, Engleman EG, Watts TH, Winer S, Winer DA.

Cell Metab. 2018 Dec 4;28(6):922-934.e4. doi: 10.1016/j.cmet.2018.08.003. Epub 2018 Aug 30.


Use of Flow Cytometry for Diagnosis of Epilepsy Associated With Homozygous PIGW Variants.

Foskett GK, Engleman E, Klotz J, Choi O, Tolentino L, Kochhar A, Yang QZ, Stevenson DA.

Pediatr Neurol. 2018 Aug;85:67-70. doi: 10.1016/j.pediatrneurol.2018.05.010. Epub 2018 Jun 5.


Enhanced extraction of butyric acid under high-pressure CO2 conditions to integrate chemical catalysis for value-added chemicals and biofuels.

Chun J, Choi O, Sang BI.

Biotechnol Biofuels. 2018 Apr 23;11:119. doi: 10.1186/s13068-018-1120-1. eCollection 2018.


Genetic variation and gene expression across multiple tissues and developmental stages in a nonhuman primate.

Jasinska AJ, Zelaya I, Service SK, Peterson CB, Cantor RM, Choi OW, DeYoung J, Eskin E, Fairbanks LA, Fears S, Furterer AE, Huang YS, Ramensky V, Schmitt CA, Svardal H, Jorgensen MJ, Kaplan JR, Villar D, Aken BL, Flicek P, Nag R, Wong ES, Blangero J, Dyer TD, Bogomolov M, Benjamini Y, Weinstock GM, Dewar K, Sabatti C, Wilson RK, Jentsch JD, Warren W, Coppola G, Woods RP, Freimer NB.

Nat Genet. 2017 Dec;49(12):1714-1721. doi: 10.1038/ng.3959. Epub 2017 Oct 30.


A Longitudinal Study on the Effects of Negative Rearing Experiences on Adolescents' Social Withdrawal and Aggression.

Lee KS, Choi OJ, Kim JH.

Korean J Fam Med. 2017 Sep;38(5):276-283. doi: 10.4082/kjfm.2017.38.5.276. Epub 2017 Sep 22.


The Relationship between Renal Function and Bone Marrow Density in Healthy Korean Women.

Park BK, Yun KY, Kim SC, Joo JK, Lee KS, Choi OH.

J Menopausal Med. 2017 Aug;23(2):96-101. doi: 10.6118/jmm.2017.23.2.96. Epub 2017 Aug 31.


What Neuroscience Can and Cannot Answer.

Choi OS.

J Am Acad Psychiatry Law. 2017 Sep;45(3):278-285. No abstract available.


Pretreatment of agricultural biomass for anaerobic digestion: Current state and challenges.

Paudel SR, Banjara SP, Choi OK, Park KY, Kim YM, Lee JW.

Bioresour Technol. 2017 Dec;245(Pt A):1194-1205. doi: 10.1016/j.biortech.2017.08.182. Epub 2017 Sep 1. Review.


Identification of novel ALK2 inhibitors and their effect on cancer cells.

Kim M, Choi O, Pyo S, Choi SU, Park CH.

Biochem Biophys Res Commun. 2017 Oct 7;492(1):121-127. doi: 10.1016/j.bbrc.2017.08.016. Epub 2017 Aug 4.


Prevalence and Toxin Characteristics of Bacillus thuringiensis Isolated from Organic Vegetables.

Kim JB, Choi OK, Kwon SM, Cho SH, Park BJ, Jin NY, Yu YM, Oh DH.

J Microbiol Biotechnol. 2017 Aug 28;27(8):1449-1456. doi: 10.4014/jmb.1703.03063.


An Immunosuppressive Dendritic Cell Subset Accumulates at Secondary Sites and Promotes Metastasis in Pancreatic Cancer.

Kenkel JA, Tseng WW, Davidson MG, Tolentino LL, Choi O, Bhattacharya N, Seeley ES, Winer DA, Reticker-Flynn NE, Engleman EG.

Cancer Res. 2017 Aug 1;77(15):4158-4170. doi: 10.1158/0008-5472.CAN-16-2212. Epub 2017 Jun 13.


A Rare Case of an Autoamputated Ovary with Mature Cystic Teratoma.

Kim HG, Song YJ, Na YJ, Yang J, Choi OH.

J Menopausal Med. 2017 Apr;23(1):74-76. doi: 10.6118/jmm.2017.23.1.74. Epub 2017 Apr 28.


Lymphoepithelioma-like carcinoma of the uterine cervix.

Yun HS, Lee SK, Yoon G, Kim HG, Lee DH, Na YJ, Choi OH, Shin DH, Song YJ.

Obstet Gynecol Sci. 2017 Jan;60(1):118-123. doi: 10.5468/ogs.2017.60.1.118. Epub 2017 Jan 19.


A distinct subset of plasmacytoid dendritic cells induces activation and differentiation of B and T lymphocytes.

Zhang H, Gregorio JD, Iwahori T, Zhang X, Choi O, Tolentino LL, Prestwood T, Carmi Y, Engleman EG.

Proc Natl Acad Sci U S A. 2017 Feb 21;114(8):1988-1993. doi: 10.1073/pnas.1610630114. Epub 2017 Feb 6.


Adipose tissue macrophages impair preadipocyte differentiation in humans.

Liu LF, Craig CM, Tolentino LL, Choi O, Morton J, Rivas H, Cushman SW, Engleman EG, McLaughlin T.

PLoS One. 2017 Feb 2;12(2):e0170728. doi: 10.1371/journal.pone.0170728. eCollection 2017.


Non-puerperal Uterine Inversion Presented with Hypovolemic Shock.

Song YJ, Yang J, Yun HS, Lee SK, Kim HG, Lee DH, Choi OH, Na YJ.

J Menopausal Med. 2016 Dec;22(3):184-187. doi: 10.6118/jmm.2016.22.3.184. Epub 2016 Dec 31.


Restoring Retinoic Acid Attenuates Intestinal Inflammation and Tumorigenesis in APCMin/+ Mice.

Penny HL, Prestwood TR, Bhattacharya N, Sun F, Kenkel JA, Davidson MG, Shen L, Zuniga LA, Seeley ES, Pai R, Choi O, Tolentino L, Wang J, Napoli JL, Engleman EG.

Cancer Immunol Res. 2016 Nov;4(11):917-926. Epub 2016 Sep 16.


Normalizing Microbiota-Induced Retinoic Acid Deficiency Stimulates Protective CD8(+) T Cell-Mediated Immunity in Colorectal Cancer.

Bhattacharya N, Yuan R, Prestwood TR, Penny HL, DiMaio MA, Reticker-Flynn NE, Krois CR, Kenkel JA, Pham TD, Carmi Y, Tolentino L, Choi O, Hulett R, Wang J, Winer DA, Napoli JL, Engleman EG.

Immunity. 2016 Sep 20;45(3):641-655. doi: 10.1016/j.immuni.2016.08.008. Epub 2016 Aug 30.


Pyrosequencing analysis of microbial communities in hollow fiber-membrane biofilm reactors system for treating high-strength nitrogen wastewater.

Park JH, Choi O, Lee TH, Kim H, Sang BI.

Chemosphere. 2016 Nov;163:192-201. doi: 10.1016/j.chemosphere.2016.07.099. Epub 2016 Aug 13.


Huntington's disease accelerates epigenetic aging of human brain and disrupts DNA methylation levels.

Horvath S, Langfelder P, Kwak S, Aaronson J, Rosinski J, Vogt TF, Eszes M, Faull RL, Curtis MA, Waldvogel HJ, Choi OW, Tung S, Vinters HV, Coppola G, Yang XW.

Aging (Albany NY). 2016 Jul;8(7):1485-512. doi: 10.18632/aging.101005.


Production of medium-chain carboxylic acids by Megasphaera sp. MH with supplemental electron acceptors.

Jeon BS, Choi O, Um Y, Sang BI.

Biotechnol Biofuels. 2016 Jun 22;9:129. doi: 10.1186/s13068-016-0549-3. eCollection 2016.


Shifting p53-induced senescence to cell death by TIS21(/BTG2/Pc3) gene through posttranslational modification of p53 protein.

Choi OR, Ryu MS, Lim IK.

Cell Signal. 2016 Sep;28(9):1172-85. doi: 10.1016/j.cellsig.2016.05.014. Epub 2016 May 18.


Tetranychus urticae (Acari: Tetranychidae) transmits Acidovorax citrulli, causal agent of bacterial fruit blotch of watermelon.

Choi O, Park JJ, Kim J.

Exp Appl Acarol. 2016 Aug;69(4):445-51. doi: 10.1007/s10493-016-0048-z. Epub 2016 May 13.


The effectiveness of laparoendoscopic single-site surgery (LESS) compared with conventional laparoscopic surgery for ectopic pregnancy with hemoperitoneum.

Yang J, Na YJ, Song YJ, Choi OH, Lee SK, Kim HG.

Taiwan J Obstet Gynecol. 2016 Feb;55(1):35-9. doi: 10.1016/j.tjog.2015.02.005.


Risk Factors and Post-Resection Independent Predictive Score for the Recurrence of Hepatitis B-Related Hepatocellular Carcinoma.

Hung IF, Wong DK, Poon RT, Fong DY, Chui AH, Seto WK, Fung JY, Chan AC, Yuen JC, Tiu R, Choi O, Lai CL, Yuen MF.

PLoS One. 2016 Feb 22;11(2):e0148493. doi: 10.1371/journal.pone.0148493. eCollection 2016.


Contributing effect of various washing procedures and additives on the decline pattern of diethofencarb in crown daisy, a model of leafy vegetables.

Kim SW, Abd El-Aty AM, Choi JH, Lee YJ, Lieu TT, Chung HS, Rahman MM, Choi OJ, Shin HC, Rhee GS, Chang MI, Kim HJ, Shim JH.

Food Chem. 2016 Jun 15;201:153-9. doi: 10.1016/j.foodchem.2016.01.064. Epub 2016 Jan 21.


Extracellular electron transfer from cathode to microbes: application for biofuel production.

Choi O, Sang BI.

Biotechnol Biofuels. 2016 Jan 19;9:11. doi: 10.1186/s13068-016-0426-0. eCollection 2016. Review.


Autophagy deficiency in β cells blunts incretin-induced suppression of glucagon release from α cells.

Kim MJ, Choi OK, Chae KS, Lee H, Chung SS, Ham DS, Kim JW, Yoon KH, Park KS, Jung HS.

Islets. 2015;7(5):e1129096. doi: 10.1080/19382014.2015.1129096.


Analysis of the Microbial Community in an Acidic Hollow-Fiber Membrane Biofilm Reactor (Hf-MBfR) Used for the Biological Conversion of Carbon Dioxide to Methane.

Shin HC, Ju DH, Jeon BS, Choi O, Kim HW, Um Y, Lee DH, Sang BI.

PLoS One. 2015 Dec 22;10(12):e0144999. doi: 10.1371/journal.pone.0144999. eCollection 2015.


Haptotaxis is cell type specific and limited by substrate adhesiveness.

Wen JH, Choi O, Taylor-Weiner H, Fuhrmann A, Karpiak JV, Almutairi A, Engler AJ.

Cell Mol Bioeng. 2015 Dec 1;8(4):530-542. Epub 2015 Jun 3.


OBSCN Mutations Associated with Dilated Cardiomyopathy and Haploinsufficiency.

Marston S, Montgiraud C, Munster AB, Copeland O, Choi O, Dos Remedios C, Messer AE, Ehler E, Knöll R.

PLoS One. 2015 Sep 25;10(9):e0138568. doi: 10.1371/journal.pone.0138568. eCollection 2015.


The genome of the vervet (Chlorocebus aethiops sabaeus).

Warren WC, Jasinska AJ, García-Pérez R, Svardal H, Tomlinson C, Rocchi M, Archidiacono N, Capozzi O, Minx P, Montague MJ, Kyung K, Hillier LW, Kremitzki M, Graves T, Chiang C, Hughes J, Tran N, Huang Y, Ramensky V, Choi OW, Jung YJ, Schmitt CA, Juretic N, Wasserscheid J, Turner TR, Wiseman RW, Tuscher JJ, Karl JA, Schmitz JE, Zahn R, O'Connor DH, Redmond E, Nisbett A, Jacquelin B, Müller-Trutwin MC, Brenchley JM, Dione M, Antonio M, Schroth GP, Kaplan JR, Jorgensen MJ, Thomas GW, Hahn MW, Raney BJ, Aken B, Nag R, Schmitz J, Churakov G, Noll A, Stanyon R, Webb D, Thibaud-Nissen F, Nordborg M, Marques-Bonet T, Dewar K, Weinstock GM, Wilson RK, Freimer NB.

Genome Res. 2015 Dec;25(12):1921-33. doi: 10.1101/gr.192922.115. Epub 2015 Sep 16.


ZBTB17 (MIZ1) Is Important for the Cardiac Stress Response and a Novel Candidate Gene for Cardiomyopathy and Heart Failure.

Buyandelger B, Mansfield C, Kostin S, Choi O, Roberts AM, Ware JS, Mazzarotto F, Pesce F, Buchan R, Isaacson RL, Vouffo J, Gunkel S, Knöll G, McSweeney SJ, Wei H, Perrot A, Pfeiffer C, Toliat MR, Ilieva K, Krysztofinska E, López-Olañeta MM, Gómez-Salinero JM, Schmidt A, Ng KE, Teucher N, Chen J, Teichmann M, Eilers M, Haverkamp W, Regitz-Zagrosek V, Hasenfuss G, Braun T, Pennell DJ, Gould I, Barton PJ, Lara-Pezzi E, Schäfer S, Hübner N, Felkin LE, O'Regan DP, Brand T, Milting H, Nürnberg P, Schneider MD, Prasad S, Petretto E, Knöll R.

Circ Cardiovasc Genet. 2015 Oct;8(5):643-52. doi: 10.1161/CIRCGENETICS.113.000690. Epub 2015 Jul 14.


Analysis of Microbial Communities in Biofilms from CSTR-Type Hollow Fiber Membrane Biofilm Reactors for Autotrophic Nitrification and Hydrogenotrophic Denitrification.

Shin JH, Kim BC, Choi O, Kim H, Sang BI.

J Microbiol Biotechnol. 2015 Oct;25(10):1670-9. doi: 10.4014/jmb.1504.04017.


Sequencing strategies and characterization of 721 vervet monkey genomes for future genetic analyses of medically relevant traits.

Huang YS, Ramensky V, Service SK, Jasinska AJ, Jung Y, Choi OW, Cantor RM, Juretic N, Wasserscheid J, Kaplan JR, Jorgensen MJ, Dyer TD, Dewar K, Blangero J, Wilson RK, Warren W, Weinstock GM, Freimer NB.

BMC Biol. 2015 Jun 20;13:41. doi: 10.1186/s12915-015-0152-2.


Evaluation of photoluminescence quenching for assessing the binding of nitroaromatic compounds to a tyrosyl bolaamphiphile self-assembly.

Kwak J, Choi O, Sim E, Lee SY.

Analyst. 2015 Aug 7;140(15):5354-60. doi: 10.1039/c5an00517e.


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