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Items: 47

1.

Single-Cell Transcriptomics Reveals Spatial and Temporal Turnover of Keratinocyte Differentiation Regulators.

Finnegan A, Cho RJ, Luu A, Harirchian P, Lee J, Cheng JB, Song JS.

Front Genet. 2019 Sep 3;10:775. doi: 10.3389/fgene.2019.00775. eCollection 2019.

2.

Delayed Presentation of Cholethorax Following Hepatic Microwave Ablation and Resection in a Patient With Metastatic Rectal Cancer.

Wong J, Dincer EH, Keenan JC, Cho RJ.

J Bronchology Interv Pulmonol. 2019 Jul;26(3):e40-e43. doi: 10.1097/LBR.0000000000000586. No abstract available.

PMID:
31233477
3.

Genetic Mutations Underlying Phenotypic Plasticity in Basosquamous Carcinoma.

Chiang A, Tan CZ, Kuonen F, Hodgkinson LM, Chiang F, Cho RJ, South AP, Tang JY, Chang ALS, Rieger KE, Oro AE, Sarin KY.

J Invest Dermatol. 2019 Jun 15. pii: S0022-202X(19)31760-9. doi: 10.1016/j.jid.2019.03.1163. [Epub ahead of print]

PMID:
31207229
4.

Loss of ZNF750 in ocular and cutaneous sebaceous carcinoma.

North JP, Solomon DA, Golovato J, Bloomer M, Benz SC, Cho RJ.

J Cutan Pathol. 2019 Oct;46(10):736-741. doi: 10.1111/cup.13516. Epub 2019 Jul 8.

PMID:
31148199
5.

Utilization of Intra-airway Injection of Iopamidol.

Cho RJ, Keenan JC, Wong J, Dincer EH.

Ann Pharmacother. 2019 Aug;53(8):871-872. doi: 10.1177/1060028019843652. Epub 2019 Apr 11. No abstract available.

PMID:
30971095
6.

A20 and ABIN1 Suppression of a Keratinocyte Inflammatory Program with a Shared Single-Cell Expression Signature in Diverse Human Rashes.

Harirchian P, Lee J, Hilz S, Sedgewick AJ, Perez White BE, Kesling MJ, Mully T, Golovato J, Gray M, Mauro TM, Purdom E, Kim EA, Sbitany H, Bhutani T, Vaske CJ, Benz SC, Cho RJ, Cheng JB.

J Invest Dermatol. 2019 Jun;139(6):1264-1273. doi: 10.1016/j.jid.2018.10.046. Epub 2018 Dec 10.

PMID:
30543901
7.

Transcriptional Programming of Normal and Inflamed Human Epidermis at Single-Cell Resolution.

Cheng JB, Sedgewick AJ, Finnegan AI, Harirchian P, Lee J, Kwon S, Fassett MS, Golovato J, Gray M, Ghadially R, Liao W, Perez White BE, Mauro TM, Mully T, Kim EA, Sbitany H, Neuhaus IM, Grekin RC, Yu SS, Gray JW, Purdom E, Paus R, Vaske CJ, Benz SC, Song JS, Cho RJ.

Cell Rep. 2018 Oct 23;25(4):871-883. doi: 10.1016/j.celrep.2018.09.006.

8.

APOBEC mutation drives early-onset squamous cell carcinomas in recessive dystrophic epidermolysis bullosa.

Cho RJ, Alexandrov LB, den Breems NY, Atanasova VS, Farshchian M, Purdom E, Nguyen TN, Coarfa C, Rajapakshe K, Prisco M, Sahu J, Tassone P, Greenawalt EJ, Collisson EA, Wu W, Yao H, Su X, Guttmann-Gruber C, Hofbauer JP, Hashmi R, Fuentes I, Benz SC, Golovato J, Ehli EA, Davis CM, Davies GE, Covington KR, Murrell DF, Salas-Alanis JC, Palisson F, Bruckner AL, Robinson W, Has C, Bruckner-Tuderman L, Titeux M, Jonkman MF, Rashidghamat E, Lwin SM, Mellerio JE, McGrath JA, Bauer JW, Hovnanian A, Tsai KY, South AP.

Sci Transl Med. 2018 Aug 22;10(455). pii: eaas9668. doi: 10.1126/scitranslmed.aas9668.

PMID:
30135250
9.

Successful Deployment of Two Balloon-Expandable Stents Using an In-Stent Bifurcating Approach.

Cho RJ, Zamora FD, Gibson H, Dincer HE.

Ann Am Thorac Soc. 2018 Jul;15(7):884-886. doi: 10.1513/AnnalsATS.201712-963CC. No abstract available.

PMID:
29957039
10.

Cell of origin and mutation pattern define three clinically distinct classes of sebaceous carcinoma.

North JP, Golovato J, Vaske CJ, Sanborn JZ, Nguyen A, Wu W, Goode B, Stevers M, McMullen K, Perez White BE, Collisson EA, Bloomer M, Solomon DA, Benz SC, Cho RJ.

Nat Commun. 2018 May 14;9(1):1894. doi: 10.1038/s41467-018-04008-y.

11.

The first report of safety and feasibility of transbronchial cryoprobe lung biopsy in ARDS.

Dincer HE, Zamora F, Gibson H, Cho RJ.

Intensive Care Med. 2018 Jun;44(6):971-972. doi: 10.1007/s00134-018-5174-0. Epub 2018 Apr 21. No abstract available.

PMID:
29680965
12.

Emergence and Evolution of Mutational Hotspots in Sun-Damaged Skin.

Cheng JB, Cho RJ.

J Invest Dermatol. 2018 Jan;138(1):16-17. doi: 10.1016/j.jid.2017.09.007.

13.

Questioning the Clinical Utility of Exome Sequencing in Developing Countries.

Fong K, Bailey CV, Tuttle P, Cunningham B, McGrath JA, Cho RJ.

Pediatr Dermatol. 2017 Jan;34(1):e32-e34. doi: 10.1111/pde.13029. Epub 2016 Nov 22.

PMID:
27874213
15.

Election 2016: Voting on Variants.

Cho RJ, Collisson EA.

Cancer Discov. 2016 Jul;6(7):694-6. doi: 10.1158/2159-8290.CD-16-0559.

16.

Multiple Hereditary Infundibulocystic Basal Cell Carcinoma Syndrome Associated With a Germline SUFU Mutation.

Schulman JM, Oh DH, Sanborn JZ, Pincus L, McCalmont TH, Cho RJ.

JAMA Dermatol. 2016 Mar;152(3):323-7. doi: 10.1001/jamadermatol.2015.4233.

PMID:
26677003
17.

Measurement of Femoral Vein Diameter by Ultrasound to Estimate Central Venous Pressure.

Cho RJ, Williams DR, Leatherman JW.

Ann Am Thorac Soc. 2016 Jan;13(1):81-5. doi: 10.1513/AnnalsATS.201506-337BC.

PMID:
26561731
18.

Exome sequencing of desmoplastic melanoma identifies recurrent NFKBIE promoter mutations and diverse activating mutations in the MAPK pathway.

Shain AH, Garrido M, Botton T, Talevich E, Yeh I, Sanborn JZ, Chung J, Wang NJ, Kakavand H, Mann GJ, Thompson JF, Wiesner T, Roy R, Olshen AB, Gagnon A, Gray JW, Huh N, Hur JS, Busam KJ, Scolyer RA, Cho RJ, Murali R, Bastian BC.

Nat Genet. 2015 Oct;47(10):1194-9. doi: 10.1038/ng.3382. Epub 2015 Sep 7.

19.

Phylogenetic analyses of melanoma reveal complex patterns of metastatic dissemination.

Sanborn JZ, Chung J, Purdom E, Wang NJ, Kakavand H, Wilmott JS, Butler T, Thompson JF, Mann GJ, Haydu LE, Saw RP, Busam KJ, Lo RS, Collisson EA, Hur JS, Spellman PT, Cleaver JE, Gray JW, Huh N, Murali R, Scolyer RA, Bastian BC, Cho RJ.

Proc Natl Acad Sci U S A. 2015 Sep 1;112(35):10995-1000. doi: 10.1073/pnas.1508074112. Epub 2015 Aug 18.

20.

Erratum to: Modeling precision treatment of breast cancer.

Daemen A, Griffith OL, Heiser LM, Wang NJ, Enache OM, Sanborn Z, Pepin F, Durinck S, Korkola JE, Griffith M, Hur JS, Huh N, Chung J, Cope L, Fackler MJ, Umbricht C, Sukumar S, Seth P, Sukhatme VP, Jakkula LR, Lu Y, Mills GB, Cho RJ, Collisson EA, Van't Veer LJ, Spellman PT, Gray JW.

Genome Biol. 2015 May 12;16:95. doi: 10.1186/s13059-015-0658-5.

21.

Transcription restores DNA repair to heterochromatin, determining regional mutation rates in cancer genomes.

Zheng CL, Wang NJ, Chung J, Moslehi H, Sanborn JZ, Hur JS, Collisson EA, Vemula SS, Naujokas A, Chiotti KE, Cheng JB, Fassihi H, Blumberg AJ, Bailey CV, Fudem GM, Mihm FG, Cunningham BB, Neuhaus IM, Liao W, Oh DH, Cleaver JE, LeBoit PE, Costello JF, Lehmann AR, Gray JW, Spellman PT, Arron ST, Huh N, Purdom E, Cho RJ.

Cell Rep. 2014 Nov 20;9(4):1228-34. doi: 10.1016/j.celrep.2014.10.031. Epub 2014 Nov 20.

22.

No evidence for integrated viral DNA in the genome sequence of cutaneous squamous cell carcinoma.

Dimon MT, Wood HM, Rabbitts PH, Liao W, Cho RJ, Arron ST.

J Invest Dermatol. 2014 Jul;134(7):2055-2057. doi: 10.1038/jid.2014.52. Epub 2014 Jan 30. No abstract available.

23.

Modeling precision treatment of breast cancer.

Daemen A, Griffith OL, Heiser LM, Wang NJ, Enache OM, Sanborn Z, Pepin F, Durinck S, Korkola JE, Griffith M, Hur JS, Huh N, Chung J, Cope L, Fackler MJ, Umbricht C, Sukumar S, Seth P, Sukhatme VP, Jakkula LR, Lu Y, Mills GB, Cho RJ, Collisson EA, van't Veer LJ, Spellman PT, Gray JW.

Genome Biol. 2013;14(10):R110. Erratum in: Genome Biol. 2015;16:95.

24.

Methods and challenges in timing chromosomal abnormalities within cancer samples.

Purdom E, Ho C, Grasso CS, Quist MJ, Cho RJ, Spellman P.

Bioinformatics. 2013 Dec 15;29(24):3113-20. doi: 10.1093/bioinformatics/btt546. Epub 2013 Sep 23.

25.

Gauging NOTCH1 Activation in Cancer Using Immunohistochemistry.

Kluk MJ, Ashworth T, Wang H, Knoechel B, Mason EF, Morgan EA, Dorfman D, Pinkus G, Weigert O, Hornick JL, Chirieac LR, Hirsch M, Oh DJ, South AP, Leigh IM, Pourreyron C, Cassidy AJ, Deangelo DJ, Weinstock DM, Krop IE, Dillon D, Brock JE, Lazar AJ, Peto M, Cho RJ, Stoeck A, Haines BB, Sathayanrayanan S, Rodig S, Aster JC.

PLoS One. 2013 Jun 18;8(6):e67306. doi: 10.1371/journal.pone.0067306. Print 2013.

26.

Next-generation diagnostics for genodermatoses.

Cho RJ, Simpson MA, McGrath JA.

J Invest Dermatol. 2012 Nov 15;132(E1):E27-8. doi: 10.1038/skinbio.2012.8. Review. No abstract available.

27.

Next-Generation Diagnostics for Genodermatoses.

Cho RJ, Simpson MA, McGrath JA.

J Invest Dermatol. 2012 Nov;132 Suppl 3:E27-8. doi: 10.1038/skinbio.2012.8. No abstract available.

28.

Histology, anatomy, or geography? Exome sequencing begins to delineate somatic mutational differences in esophageal cancer.

Collisson EA, Cho RJ.

Cancer Discov. 2012 Oct;2(10):870-1. doi: 10.1158/2159-8290.CD-12-0393.

29.

What are we learning from the cancer genome?

Collisson EA, Cho RJ, Gray JW.

Nat Rev Clin Oncol. 2012 Nov;9(11):621-30. doi: 10.1038/nrclinonc.2012.159. Epub 2012 Sep 11. Review.

30.

Use of an expanded immunohistochemical panel to distinguish cutaneous Hodgkin lymphoma from histopathologic imitators.

Cho RJ, McCalmont TH, Ai WZ, Fox LP, Treseler P, Pincus LB.

J Cutan Pathol. 2012 Jun;39(6):651-8. doi: 10.1111/j.1600-0560.2012.01872.x. Epub 2012 Feb 11.

PMID:
22324490
31.

The double-edged sword of Notch signaling in cancer.

South AP, Cho RJ, Aster JC.

Semin Cell Dev Biol. 2012 Jun;23(4):458-64. doi: 10.1016/j.semcdb.2012.01.017. Epub 2012 Jan 30. Review.

32.

Genetics and epigenetics of the skin meet deep sequence.

Cheng JB, Cho RJ.

J Invest Dermatol. 2012 Mar;132(3 Pt 2):923-32. doi: 10.1038/jid.2011.436. Epub 2012 Jan 12. Review.

33.

Loss-of-function mutations in Notch receptors in cutaneous and lung squamous cell carcinoma.

Wang NJ, Sanborn Z, Arnett KL, Bayston LJ, Liao W, Proby CM, Leigh IM, Collisson EA, Gordon PB, Jakkula L, Pennypacker S, Zou Y, Sharma M, North JP, Vemula SS, Mauro TM, Neuhaus IM, Leboit PE, Hur JS, Park K, Huh N, Kwok PY, Arron ST, Massion PP, Bale AE, Haussler D, Cleaver JE, Gray JW, Spellman PT, South AP, Aster JC, Blacklow SC, Cho RJ.

Proc Natl Acad Sci U S A. 2011 Oct 25;108(43):17761-6. doi: 10.1073/pnas.1114669108. Epub 2011 Oct 17.

34.

Temporal dissection of tumorigenesis in primary cancers.

Durinck S, Ho C, Wang NJ, Liao W, Jakkula LR, Collisson EA, Pons J, Chan SW, Lam ET, Chu C, Park K, Hong SW, Hur JS, Huh N, Neuhaus IM, Yu SS, Grekin RC, Mauro TM, Cleaver JE, Kwok PY, LeBoit PE, Getz G, Cibulskis K, Aster JC, Huang H, Purdom E, Li J, Bolund L, Arron ST, Gray JW, Spellman PT, Cho RJ.

Cancer Discov. 2011 Jul;1(2):137-43. doi: 10.1158/2159-8290.CD-11-0028. Epub 2011 Jun 29.

35.

Rethinking the prosaicism of mosaicism; is it in us?

Cho RJ.

Exp Dermatol. 2010 Dec;19(12):1037-9.

PMID:
21132868
36.

Marked papillary dermal edema--an unreliable discriminator between polymorphous light eruption and lupus erythematosus or dermatomyositis.

Pincus LB, LeBoit PE, Goddard DS, Cho RJ, McCalmont TH.

J Cutan Pathol. 2010 Apr;37(4):416-25. doi: 10.1111/j.1600-0560.2010.01516.x.

PMID:
20377671
37.

A network-based analysis of systemic inflammation in humans.

Calvano SE, Xiao W, Richards DR, Felciano RM, Baker HV, Cho RJ, Chen RO, Brownstein BH, Cobb JP, Tschoeke SK, Miller-Graziano C, Moldawer LL, Mindrinos MN, Davis RW, Tompkins RG, Lowry SF; Inflamm and Host Response to Injury Large Scale Collab. Res. Program.

Nature. 2005 Oct 13;437(7061):1032-7. Epub 2005 Aug 31. Erratum in: Nature. 2005 Dec 1;438(7068):696.

PMID:
16136080
38.

Computational knowledge integration in biopharmaceutical research.

Ficenec D, Osborne M, Pradines J, Richards D, Felciano R, Cho RJ, Chen RO, Liefeld T, Owen J, Ruttenberg A, Reich C, Horvath J, Clark T.

Brief Bioinform. 2003 Sep;4(3):260-78.

PMID:
14582520
39.

Deriving meaning from genomic information.

Cho RJ.

Biotechnol Genet Eng Rev. 2000;17:91-107. Review. No abstract available.

PMID:
11255683
40.

Transcriptional regulation and function during the human cell cycle.

Cho RJ, Huang M, Campbell MJ, Dong H, Steinmetz L, Sapinoso L, Hampton G, Elledge SJ, Davis RW, Lockhart DJ.

Nat Genet. 2001 Jan;27(1):48-54.

PMID:
11137997
41.

A simple procedure for the analysis of single nucleotide polymorphisms facilitates map-based cloning in Arabidopsis.

Drenkard E, Richter BG, Rozen S, Stutius LM, Angell NA, Mindrinos M, Cho RJ, Oefner PJ, Davis RW, Ausubel FM.

Plant Physiol. 2000 Dec;124(4):1483-92.

42.

Transcription, genomes, function.

Cho RJ, Campbell MJ.

Trends Genet. 2000 Sep;16(9):409-15. Review.

PMID:
10973070
43.

Genome-wide mapping with biallelic markers in Arabidopsis thaliana.

Cho RJ, Mindrinos M, Richards DR, Sapolsky RJ, Anderson M, Drenkard E, Dewdney J, Reuber TL, Stammers M, Federspiel N, Theologis A, Yang WH, Hubbell E, Au M, Chung EY, Lashkari D, Lemieux B, Dean C, Lipshutz RJ, Ausubel FM, Davis RW, Oefner PJ.

Nat Genet. 1999 Oct;23(2):203-7.

PMID:
10508518
44.

Candidate regulatory sequence elements for cell cycle-dependent transcription in Saccharomyces cerevisiae.

Wolfsberg TG, Gabrielian AE, Campbell MJ, Cho RJ, Spouge JL, Landsman D.

Genome Res. 1999 Aug;9(8):775-92.

45.

Systematic determination of genetic network architecture.

Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM.

Nat Genet. 1999 Jul;22(3):281-5.

PMID:
10391217
46.

A genome-wide transcriptional analysis of the mitotic cell cycle.

Cho RJ, Campbell MJ, Winzeler EA, Steinmetz L, Conway A, Wodicka L, Wolfsberg TG, Gabrielian AE, Landsman D, Lockhart DJ, Davis RW.

Mol Cell. 1998 Jul;2(1):65-73.

47.

Parallel analysis of genetic selections using whole genome oligonucleotide arrays.

Cho RJ, Fromont-Racine M, Wodicka L, Feierbach B, Stearns T, Legrain P, Lockhart DJ, Davis RW.

Proc Natl Acad Sci U S A. 1998 Mar 31;95(7):3752-7.

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