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Items: 1 to 50 of 67

1.

Human Stress-inducible Hsp70 Has a High Propensity to Form ATP-dependent Antiparallel Dimers That Are Differentially Regulated by Cochaperone Binding.

Trcka F, Durech M, Vankova P, Chmelik J, Martinkova V, Hausner J, Kadek A, Marcoux J, Klumpler T, Vojtesek B, Muller P, Man P.

Mol Cell Proteomics. 2019 Feb;18(2):320-337. doi: 10.1074/mcp.RA118.001044. Epub 2018 Nov 20.

PMID:
30459217
2.

The C-type lectin-like receptor Nkrp1b: Structural proteomics reveals features affecting protein conformation and interactions.

Hernychová L, Rosůlek M, Kádek A, Mareška V, Chmelík J, Adámková L, Grobárová V, Šebesta O, Kukačka Z, Skála K, Spiwok V, Černý J, Novák P.

J Proteomics. 2019 Mar 30;196:162-172. doi: 10.1016/j.jprot.2018.11.007. Epub 2018 Nov 8.

PMID:
30414947
3.

Deep convolutional neural network-based segmentation and classification of difficult to define metastatic spinal lesions in 3D CT data.

Chmelik J, Jakubicek R, Walek P, Jan J, Ourednicek P, Lambert L, Amadori E, Gavelli G.

Med Image Anal. 2018 Oct;49:76-88. doi: 10.1016/j.media.2018.07.008. Epub 2018 Aug 3.

PMID:
30114549
4.

Impact of Chemical Cross-Linking on Protein Structure and Function.

Rozbeský D, Rosůlek M, Kukačka Z, Chmelík J, Man P, Novák P.

Anal Chem. 2018 Jan 16;90(2):1104-1113. doi: 10.1021/acs.analchem.7b02863. Epub 2018 Jan 2.

PMID:
29232109
5.

Solution structure of the lymphocyte receptor Nkrp1a reveals a distinct conformation of the long loop region as compared to in the crystal structure.

Rozbeský D, Adámek D, Pospíšilová E, Novák P, Chmelík J.

Proteins. 2016 Sep;84(9):1304-11. doi: 10.1002/prot.25078. Epub 2016 Jun 15.

PMID:
27238500
6.

Accurate micro-computed tomography imaging of pore spaces in collagen-based scaffold.

Zidek J, Vojtova L, Abdel-Mohsen AM, Chmelik J, Zikmund T, Brtnikova J, Jakubicek R, Zubal L, Jan J, Kaiser J.

J Mater Sci Mater Med. 2016 Jun;27(6):110. doi: 10.1007/s10856-016-5717-2. Epub 2016 May 6.

PMID:
27153826
7.

Spectral density mapping at multiple magnetic fields suitable for (13)C NMR relaxation studies.

Kadeřávek P, Zapletal V, Fiala R, Srb P, Padrta P, Přecechtělová JP, Šoltésová M, Kowalewski J, Widmalm G, Chmelík J, Sklenář V, Žídek L.

J Magn Reson. 2016 May;266:23-40. doi: 10.1016/j.jmr.2016.02.016. Epub 2016 Mar 8.

PMID:
27003380
8.

Combined bone lesion analysis in 3D CT data of vertebrae.

Jan J, Novosadova M, Demel J, Ourednicek P, Chmelik J, Jakubicek R.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:6374-7. doi: 10.1109/EMBC.2015.7319851.

PMID:
26737751
9.

1H, 13C and 15N resonance assignments of human DCL-1 (CD302) extracellular domain.

Pospíšilová E, Kavan D, Novák P, Chmelík J.

Biomol NMR Assign. 2016 Apr;10(1):189-92. doi: 10.1007/s12104-015-9664-5. Epub 2016 Jan 2.

PMID:
26725057
10.

Probing the Ca(2+)-assisted π-π interaction during Ca(2+)-dependent protein folding.

Matyska Liskova P, Fiser R, Macek P, Chmelik J, Sykora J, Bednarova L, Konopasek I, Bumba L.

Soft Matter. 2016 Jan 14;12(2):531-41. doi: 10.1039/c5sm01796c. Epub 2015 Oct 22.

PMID:
26489523
11.

Recombinant expression, in vitro refolding and characterizing disulfide bonds of a mouse inhibitory C-type lectin-like receptor Nkrp1b.

Hernychová L, Mrázek H, Ivanova L, Kukačka Z, Chmelík J, Novák P.

Physiol Res. 2015;64 Suppl 1:S85-93.

12.

Preparation of soluble isotopically labeled NKp30, a human natural cytotoxicity receptor, for structural studies using NMR.

Grave L, Tůmová L, Mrázek H, Kavan D, Chmelík J, Vaněk O, Novák P, Bezouška K.

Protein Expr Purif. 2012 Dec;86(2):142-50. doi: 10.1016/j.pep.2012.09.016. Epub 2012 Oct 8.

PMID:
23059620
13.

The combination of hydrogen/deuterium exchange or chemical cross-linking techniques with mass spectrometry: mapping of human 14-3-3ζ homodimer interface.

Haladová K, Mrázek H, Ječmen T, Halada P, Man P, Novák P, Chmelík J, Obšil T, Šulc M.

J Struct Biol. 2012 Jul;179(1):10-7. doi: 10.1016/j.jsb.2012.04.016. Epub 2012 May 2.

PMID:
22580067
14.

Chemical cross-linking and H/D exchange for fast refinement of protein crystal structure.

Rozbesky D, Man P, Kavan D, Chmelik J, Cerny J, Bezouska K, Novak P.

Anal Chem. 2012 Jan 17;84(2):867-70. doi: 10.1021/ac202818m. Epub 2011 Dec 23.

PMID:
22196380
15.

High-level expression of soluble form of mouse natural killer cell receptor NKR-P1C(B6) in Escherichia coli.

Rozbeský D, Kavan D, Chmelík J, Novák P, Vaněk O, Bezouška K.

Protein Expr Purif. 2011 Jun;77(2):178-84. doi: 10.1016/j.pep.2011.01.013. Epub 2011 Feb 1.

PMID:
21284957
16.

Identification of N-glycosylation in prolyl endoprotease from Aspergillus niger and evaluation of the enzyme for its possible application in proteomics.

Sebela M, Rehulka P, Kábrt J, Rehulková H, Ozdian T, Raus M, Franc V, Chmelík J.

J Mass Spectrom. 2009 Nov;44(11):1587-95. doi: 10.1002/jms.1667.

PMID:
19757411
17.

Investigation of thermal denaturation of barley nonspecific lipid transfer protein 1 (ns-LTP1b) by nuclear magnetic resonance and differential scanning calorimetry.

Matejková M, Zídková J, Zídek L, Wimmerová M, Chmelík J, Sklenár V.

J Agric Food Chem. 2009 Sep 23;57(18):8444-52. doi: 10.1021/jf902580f.

PMID:
19719083
18.

NMR structure of the N-terminal domain of capsid protein from the mason-pfizer monkey virus.

Macek P, Chmelík J, Krízová I, Kaderávek P, Padrta P, Zídek L, Wildová M, Hadravová R, Chaloupková R, Pichová I, Ruml T, Rumlová M, Sklenár V.

J Mol Biol. 2009 Sep 11;392(1):100-14. doi: 10.1016/j.jmb.2009.06.029. Epub 2009 Jun 13.

PMID:
19527730
19.

Proteomic profiling of human embryonic stem cell-derived microvesicles reveals a risk of transfer of proteins of bovine and mouse origin.

Kubikova I, Konecna H, Sedo O, Zdrahal Z, Rehulka P, Hribkova H, Rehulkova H, Hampl A, Chmelik J, Dvorak P.

Cytotherapy. 2009;11(3):330-40, 1 p following 340. doi: 10.1080/14653240802595531.

PMID:
19401887
20.

Short monolithic columns for purification and fractionation of peptide samples for matrix-assisted laser desorption/ionization time-of-flight/time-of-flight mass spectrometry analysis in proteomics.

Moravcová D, Kahle V, Rehulková H, Chmelík J, Rehulka P.

J Chromatogr A. 2009 Apr 24;1216(17):3629-36. doi: 10.1016/j.chroma.2009.01.075. Epub 2009 Jan 30.

PMID:
19217112
21.

Influence of different proteomic protocols on degree of high-coverage identification of nonspecific lipid transfer protein 1 modified during malting.

Chmelik J, Zidkova J, Rehulka P, Petry-Podgorska I, Bobalova J.

Electrophoresis. 2009 Feb;30(3):560-7. doi: 10.1002/elps.200800530.

PMID:
19156768
22.

Soluble recombinant CD69 receptors optimized to have an exceptional physical and chemical stability display prolonged circulation and remain intact in the blood of mice.

Vanek O, Nálezková M, Kavan D, Borovicková I, Pompach P, Novák P, Kumar V, Vannucci L, Hudecek J, Hofbauerová K, Kopecký V Jr, Brynda J, Kolenko P, Dohnálek J, Kaderávek P, Chmelík J, Gorcík L, Zídek L, Sklenár V, Bezouska K.

FEBS J. 2008 Nov;275(22):5589-606. doi: 10.1111/j.1742-4658.2008.06683.x.

23.

Different elution modes and field programming in gravitational field-flow fractionation. Effect of channel angle.

Park MR, Kang DY, Chmelik J, Kang N, Kim JS, Lee S.

J Chromatogr A. 2008 Oct 31;1209(1-2):206-11. doi: 10.1016/j.chroma.2008.09.014. Epub 2008 Sep 10.

PMID:
18805537
25.

Bioaffinity magnetic reactor for peptide digestion followed by analysis using bottom-up shotgun proteomics strategy.

Korecká L, Jankovicová B, Krenková J, Hernychová L, Slováková M, Le-Nell A, Chmelik J, Foret F, Viovy JL, Bilková Z.

J Sep Sci. 2008 Feb;31(3):507-15. doi: 10.1002/jssc.200700428.

PMID:
18266262
26.
27.

Structure of Bombyx mori chemosensory protein 1 in solution.

Jansen S, Chmelík J, Zídek L, Padrta P, Novák P, Zdráhal Z, Picimbon JF, Löfstedt C, Sklenár V.

Arch Insect Biochem Physiol. 2007 Nov;66(3):135-45.

PMID:
17966128
29.

Relative quantitation of proteins fractionated by the ProteomeLab PF 2D system using isobaric tags for relative and absolute quantitation (iTRAQ).

Skalnikova H, Rehulka P, Chmelik J, Martinkova J, Zilvarova M, Gadher SJ, Kovarova H.

Anal Bioanal Chem. 2007 Nov;389(5):1639-45. Epub 2007 Aug 28.

PMID:
17724578
30.

Applications of field-flow fractionation in proteomics: presence and future.

Chmelik J.

Proteomics. 2007 Aug;7(16):2719-28. Review.

PMID:
17639605
31.
33.

A proteomic approach to studying the differentiation of neural stem cells.

Skalnikova H, Halada P, Vodicka P, Motlik J, Rehulka P, Hørning O, Chmelik J, Nørregaard Jensen O, Kovarova H.

Proteomics. 2007 Jun;7(11):1825-38.

PMID:
17474145
34.

Complex analytical approach to characterization of the influence of carbon dioxide concentration on carbohydrate composition in Norway spruce needles.

Cabálková J, Wahlund KG, Chmelík J.

J Chromatogr A. 2007 May 4;1148(2):189-99. Epub 2007 Mar 15.

PMID:
17382335
35.
36.

Positive-ion fragmentation in matrix-assisted laser desorption/ionization tandem time of flight mass spectrometry of synthetic analogs of the O-specific polysaccharide of Vibrio cholerae O:1.

Kovácik V, Bekesová S, Pätoprstý V, Rehulka P, Chmelík J, Kovác P.

Eur J Mass Spectrom (Chichester). 2006;12(4):247-52.

PMID:
17057281
37.

Inhibition of plant amine oxidases by a novel series of diamine derivatives.

Stránská J, Sebela M, Tarkowski P, Rehulka P, Chmelík J, Popa I, Pec P.

Biochimie. 2007 Jan;89(1):135-44. Epub 2006 Sep 11.

PMID:
16989933
39.
40.

Negative electrospray, ion trap multistage mass spectrometry of synthetic fragments of the O-PS of Vibrio cholerae O:1.

Bekesová S, Kovácik V, Chmelík J, Kovác P.

Eur J Mass Spectrom (Chichester). 2006;12(1):43-50.

PMID:
16531650
42.

A new approach in proteomics of wheat gluten: combining chymotrypsin cleavage and matrix-assisted laser desorption/ionization quadrupole ion trap reflectron tandem mass spectrometry.

Salplachta J, Marchetti M, Chmelík J, Allmaier G.

Rapid Commun Mass Spectrom. 2005;19(18):2725-8. No abstract available.

PMID:
16124027
43.

Electrospray ionization ion-trap multistage mass spectrometric study of sodium cationized aldobiuronic and pseudoaldobiuronic acid derivatives.

Kovácik V, Bekesová S, Tvaroska I, Hirsch J, Chmelík J.

J Mass Spectrom. 2004 Dec;39(12):1554-61.

PMID:
15578757
45.

Different behavior of dextrans in positive-ion and negative-ion mass spectrometry.

Cmelík R, Stikarovská M, Chmelík J.

J Mass Spectrom. 2004 Dec;39(12):1467-73.

PMID:
15578638
49.

Internal consistency of NMR data obtained in partially aligned biomacromolecules.

Zídek L, Padrta P, Chmelík J Jr, Sklenár V.

J Magn Reson. 2003 Jun;162(2):385-95.

PMID:
12810024
50.

[Pitfalls in the diagnosis of carcinoids in patients treated with aminosalicylates].

Dastych M Jr, Dastych M Sr, Zboril V, Senkyrík M, Starý K, Cáslavský J, Chmelík J.

Vnitr Lek. 2003 Mar;49(3):200-4. Czech.

PMID:
12733495

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