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Items: 1 to 50 of 61

1.

Genome-wide divergence among invasive populations of Aedes aegypti in California.

Lee Y, Schmidt H, Collier TC, Conner WR, Hanemaaijer MJ, Slatkin M, Marshall JM, Chiu JC, Smartt CT, Lanzaro GC, Mulligan FS, Cornel AJ.

BMC Genomics. 2019 Mar 12;20(1):204. doi: 10.1186/s12864-019-5586-4.

2.

O-GlcNAcylation of PERIOD regulates its interaction with CLOCK and timing of circadian transcriptional repression.

Li YH, Liu X, Vanselow JT, Zheng H, Schlosser A, Chiu JC.

PLoS Genet. 2019 Jan 31;15(1):e1007953. doi: 10.1371/journal.pgen.1007953. eCollection 2019 Jan.

3.

CK1α Collaborates with DOUBLETIME to Regulate PERIOD Function in the Drosophila Circadian Clock.

Lam VH, Li YH, Liu X, Murphy KA, Diehl JS, Kwok RS, Chiu JC.

J Neurosci. 2018 Dec 12;38(50):10631-10643. doi: 10.1523/JNEUROSCI.0871-18.2018. Epub 2018 Oct 29.

5.

Remote Sensing of Droplet Number Concentration in Warm Clouds: A Review of the Current State of Knowledge and Perspectives.

Grosvenor DP, Sourdeval O, Zuidema P, Ackerman A, Alexandrov MD, Bennartz R, Boers R, Cairns B, Chiu JC, Christensen M, Deneke H, Diamond M, Feingold G, Fridlind A, Hünerbein A, Knist C, Kollias P, Marshak A, McCoy D, Merk D, Painemal D, Rausch J, Rosenfeld D, Russchenberg H, Seifert P, Sinclair K, Stier P, van Diedenhoven B, Wendisch M, Werner F, Wood R, Zhang Z, Quaas J.

Rev Geophys. 2018 Jun;56(2):409-453. doi: 10.1029/2017RG000593. Epub 2018 Jun 27.

6.

Immunomodulation Effects of Schizonepeta tenuifolia Briq. on the IgE-Induced Allergic Model of RBL-2H3 Cells.

Lin YH, Chen HY, Chiu JC, Chen KJ, Ho HY, Yang SH.

Evid Based Complement Alternat Med. 2018 Apr 22;2018:6514705. doi: 10.1155/2018/6514705. eCollection 2018.

7.

Rapid Global Spread of wRi-like Wolbachia across Multiple Drosophila.

Turelli M, Cooper BS, Richardson KM, Ginsberg PS, Peckenpaugh B, Antelope CX, Kim KJ, May MR, Abrieux A, Wilson DA, Bronski MJ, Moore BR, Gao JJ, Eisen MB, Chiu JC, Conner WR, Hoffmann AA.

Curr Biol. 2018 Mar 19;28(6):963-971.e8. doi: 10.1016/j.cub.2018.02.015. Epub 2018 Mar 8.

8.

Guidelines for Genome-Scale Analysis of Biological Rhythms.

Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, Crowell AM, DeBruyne JP, Dijk DJ, DiTacchio L, Doyle FJ, Duffield GE, Dunlap JC, Eckel-Mahan K, Esser KA, FitzGerald GA, Forger DB, Francey LJ, Fu YH, Gachon F, Gatfield D, de Goede P, Golden SS, Green C, Harer J, Harmer S, Haspel J, Hastings MH, Herzel H, Herzog ED, Hoffmann C, Hong C, Hughey JJ, Hurley JM, de la Iglesia HO, Johnson C, Kay SA, Koike N, Kornacker K, Kramer A, Lamia K, Leise T, Lewis SA, Li J, Li X, Liu AC, Loros JJ, Martino TA, Menet JS, Merrow M, Millar AJ, Mockler T, Naef F, Nagoshi E, Nitabach MN, Olmedo M, Nusinow DA, Ptáček LJ, Rand D, Reddy AB, Robles MS, Roenneberg T, Rosbash M, Ruben MD, Rund SSC, Sancar A, Sassone-Corsi P, Sehgal A, Sherrill-Mix S, Skene DJ, Storch KF, Takahashi JS, Ueda HR, Wang H, Weitz C, Westermark PO, Wijnen H, Xu Y, Wu G, Yoo SH, Young M, Zhang EE, Zielinski T, Hogenesch JB.

J Biol Rhythms. 2017 Oct;32(5):380-393. doi: 10.1177/0748730417728663. Epub 2017 Nov 3.

9.

High throughput sequencing reveals Drosophila suzukii responses to insecticides.

Mishra R, Chiu JC, Hua G, Tawari NR, Adang MJ, Sial AA.

Insect Sci. 2018 Dec;25(6):928-945. doi: 10.1111/1744-7917.12498. Epub 2017 Aug 9.

PMID:
28636268
10.

OrthoReD: a rapid and accurate orthology prediction tool with low computational requirement.

Battenberg K, Lee EK, Chiu JC, Berry AM, Potter D.

BMC Bioinformatics. 2017 Jun 21;18(1):310. doi: 10.1186/s12859-017-1726-5.

11.

Oral delivery of dsRNA by microbes: Beyond pest control.

Abrieux A, Chiu JC.

Commun Integr Biol. 2016 Nov 4;9(6):e1236163. doi: 10.1080/19420889.2016.1236163. eCollection 2016.

12.

Codon usage affects the structure and function of the Drosophila circadian clock protein PERIOD.

Fu J, Murphy KA, Zhou M, Li YH, Lam VH, Tabuloc CA, Chiu JC, Liu Y.

Genes Dev. 2016 Aug 1;30(15):1761-75. doi: 10.1101/gad.281030.116.

13.

Drosophila suzukii population response to environment and management strategies.

Wiman NG, Dalton DT, Anfora G, Biondi A, Chiu JC, Daane KM, Gerdeman B, Gottardello A, Hamby KA, Isaacs R, Grassi A, Ioriatti C, Lee JC, Miller B, Stacconi MV, Shearer PW, Tanigoshi L, Wang X, Walton VM.

J Pest Sci (2004). 2016;89:653-665. Epub 2016 Apr 1.

14.

Seasonal cues induce phenotypic plasticity of Drosophila suzukii to enhance winter survival.

Shearer PW, West JD, Walton VM, Brown PH, Svetec N, Chiu JC.

BMC Ecol. 2016 Mar 22;16:11. doi: 10.1186/s12898-016-0070-3.

15.

Ingestion of genetically modified yeast symbiont reduces fitness of an insect pest via RNA interference.

Murphy KA, Tabuloc CA, Cervantes KR, Chiu JC.

Sci Rep. 2016 Mar 2;6:22587. doi: 10.1038/srep22587.

16.

Understanding the role of chromatin remodeling in the regulation of circadian transcription in Drosophila.

Kwok RS, Lam VH, Chiu JC.

Fly (Austin). 2015;9(4):145-54. doi: 10.1080/19336934.2016.1143993.

17.

Investigating associations between biting time in the malaria vector Anopheles arabiensis Patton and single nucleotide polymorphisms in circadian clock genes: support for sub-structure among An. arabiensis in the Kilombero valley of Tanzania.

Maliti DV, Marsden CD, Main BJ, Govella NJ, Yamasaki Y, Collier TC, Kreppel K, Chiu JC, Lanzaro GC, Ferguson HM, Lee Y.

Parasit Vectors. 2016 Feb 27;9:109. doi: 10.1186/s13071-016-1394-8.

18.

Large-Scale Coding Sequence Change Underlies the Evolution of Postdevelopmental Novelty in Honey Bees.

Jasper WC, Linksvayer TA, Atallah J, Friedman D, Chiu JC, Johnson BR.

Mol Biol Evol. 2016 May;33(5):1379. doi: 10.1093/molbev/msw022. Epub 2016 Feb 23. No abstract available.

PMID:
26912809
19.

Identification of Light-Sensitive Phosphorylation Sites on PERIOD That Regulate the Pace of Circadian Rhythms in Drosophila.

Yildirim E, Chiu JC, Edery I.

Mol Cell Biol. 2015 Dec 28;36(6):855-70. doi: 10.1128/MCB.00682-15.

20.

Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa.

Borowiec ML, Lee EK, Chiu JC, Plachetzki DC.

BMC Genomics. 2015 Nov 23;16:987. doi: 10.1186/s12864-015-2146-4.

21.

The Catalytic and Non-catalytic Functions of the Brahma Chromatin-Remodeling Protein Collaborate to Fine-Tune Circadian Transcription in Drosophila.

Kwok RS, Li YH, Lei AJ, Edery I, Chiu JC.

PLoS Genet. 2015 Jul 1;11(7):e1005307. doi: 10.1371/journal.pgen.1005307. eCollection 2015 Jul.

22.

Evidence that natural selection maintains genetic variation for sleep in Drosophila melanogaster.

Svetec N, Zhao L, Saelao P, Chiu JC, Begun DJ.

BMC Evol Biol. 2015 Mar 13;15:41. doi: 10.1186/s12862-015-0316-2.

23.

Using comparative genomics to develop a molecular diagnostic for the identification of an emerging pest Drosophila suzukii.

Murphy KA, Unruh TR, Zhou LM, Zalom FG, Shearer PW, Beers EH, Walton VM, Miller B, Chiu JC.

Bull Entomol Res. 2015 Jun;105(3):364-72. doi: 10.1017/S0007485315000218. Epub 2015 Mar 25.

PMID:
25804294
24.

Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes.

Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, Brockman AI, Burkot TR, Burt A, Chan CS, Chauve C, Chiu JC, Christensen M, Costantini C, Davidson VL, Deligianni E, Dottorini T, Dritsou V, Gabriel SB, Guelbeogo WM, Hall AB, Han MV, Hlaing T, Hughes DS, Jenkins AM, Jiang X, Jungreis I, Kakani EG, Kamali M, Kemppainen P, Kennedy RC, Kirmitzoglou IK, Koekemoer LL, Laban N, Langridge N, Lawniczak MK, Lirakis M, Lobo NF, Lowy E, MacCallum RM, Mao C, Maslen G, Mbogo C, McCarthy J, Michel K, Mitchell SN, Moore W, Murphy KA, Naumenko AN, Nolan T, Novoa EM, O'Loughlin S, Oringanje C, Oshaghi MA, Pakpour N, Papathanos PA, Peery AN, Povelones M, Prakash A, Price DP, Rajaraman A, Reimer LJ, Rinker DC, Rokas A, Russell TL, Sagnon N, Sharakhova MV, Shea T, Simão FA, Simard F, Slotman MA, Somboon P, Stegniy V, Struchiner CJ, Thomas GW, Tojo M, Topalis P, Tubio JM, Unger MF, Vontas J, Walton C, Wilding CS, Willis JH, Wu YC, Yan G, Zdobnov EM, Zhou X, Catteruccia F, Christophides GK, Collins FH, Cornman RS, Crisanti A, Donnelly MJ, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Hansen IA, Howell PI, Kafatos FC, Kellis M, Lawson D, Louis C, Luckhart S, Muskavitch MA, Ribeiro JM, Riehle MA, Sharakhov IV, Tu Z, Zwiebel LJ, Besansky NJ.

Science. 2015 Jan 2;347(6217):1258522. doi: 10.1126/science.1258522. Epub 2014 Nov 27.

25.

Large-scale coding sequence change underlies the evolution of postdevelopmental novelty in honey bees.

Jasper WC, Linksvayer TA, Atallah J, Friedman D, Chiu JC, Johnson BR.

Mol Biol Evol. 2015 Feb;32(2):334-46. doi: 10.1093/molbev/msu292. Epub 2014 Oct 28. Erratum in: Mol Biol Evol. 2016 May;33(5):1379.

PMID:
25351750
26.

Integrating temperature-dependent life table data into a matrix projection model for Drosophila suzukii population estimation.

Wiman NG, Walton VM, Dalton DT, Anfora G, Burrack HJ, Chiu JC, Daane KM, Grassi A, Miller B, Tochen S, Wang X, Ioriatti C.

PLoS One. 2014 Sep 5;9(9):e106909. doi: 10.1371/journal.pone.0106909. eCollection 2014.

27.

Radioactive seed localization of nonpalpable breast lesions in an academic comprehensive cancer program community hospital setting.

Chiu JC, Ajmal S, Zhu X, Griffith E, Encarnacion T, Barr L.

Am Surg. 2014 Jul;80(7):675-9.

PMID:
24987899
28.

Genome of Drosophila suzukii, the spotted wing drosophila.

Chiu JC, Jiang X, Zhao L, Hamm CA, Cridland JM, Saelao P, Hamby KA, Lee EK, Kwok RS, Zhang G, Zalom FG, Walton VM, Begun DJ.

G3 (Bethesda). 2013 Dec 9;3(12):2257-71. doi: 10.1534/g3.113.008185.

29.

Phylogenomics resolves evolutionary relationships among ants, bees, and wasps.

Johnson BR, Borowiec ML, Chiu JC, Lee EK, Atallah J, Ward PS.

Curr Biol. 2013 Oct 21;23(20):2058-62. doi: 10.1016/j.cub.2013.08.050. Epub 2013 Oct 3. Erratum in: Curr Biol. 2013 Dec 16;23(24):2565.

30.

Integrating circadian activity and gene expression profiles to predict chronotoxicity of Drosophila suzukii response to insecticides.

Hamby KA, Kwok RS, Zalom FG, Chiu JC.

PLoS One. 2013 Jul 5;8(7):e68472. doi: 10.1371/journal.pone.0068472. Print 2013.

31.

Deleterious effect of suboptimal diet on rest-activity cycle in Anastrepha ludens manifests itself with age.

Chiu JC, Kaub K, Zou S, Liedo P, Altamirano-Robles L, Ingram D, Carey JR.

Sci Rep. 2013;3:1773. doi: 10.1038/srep01773. Erratum in: Sci Rep. 2013;3:2450.

32.

New evidence supporting the mechanism of Gilch polymerization from an extremely twisted biphenyl monomer.

Chen JC, Chiang CJ, Chiu JC, Ju JJ.

Chem Commun (Camb). 2012 Aug 11;48(62):7756-8. doi: 10.1039/c2cc33008c. Epub 2012 Jun 28.

PMID:
22740068
34.

A functional phylogenomic view of the seed plants.

Lee EK, Cibrian-Jaramillo A, Kolokotronis SO, Katari MS, Stamatakis A, Ott M, Chiu JC, Little DP, Stevenson DW, McCombie WR, Martienssen RA, Coruzzi G, Desalle R.

PLoS Genet. 2011 Dec;7(12):e1002411. doi: 10.1371/journal.pgen.1002411. Epub 2011 Dec 15.

35.

NEMO/NLK phosphorylates PERIOD to initiate a time-delay phosphorylation circuit that sets circadian clock speed.

Chiu JC, Ko HW, Edery I.

Cell. 2011 Apr 29;145(3):357-70. doi: 10.1016/j.cell.2011.04.002. Erratum in: Cell. 2011 May13;145(4):635.

36.

Pulse shortening mode-locked fiber laser by thickness and concentration product of carbon nanotube based saturable absorber.

Chiu JC, Chang CM, Hsieh BZ, Lin SC, Yeh CY, Lin GR, Lee CK, Lin JJ, Cheng WH.

Opt Express. 2011 Feb 28;19(5):4036-41. doi: 10.1364/OE.19.004036.

PMID:
21369231
37.

Effect of biomass open burning on particulate matter and polycyclic aromatic hydrocarbon concentration levels and PAH dry deposition in ambient air.

Chiu JC, Shen YH, Li HW, Chang SS, Wang LC, Chang-Chien GP.

J Environ Sci Health A Tox Hazard Subst Environ Eng. 2011;46(2):188-97. doi: 10.1080/10934529.2011.532438.

PMID:
21240707
38.

Innovative grid positioning system (GPS) guidance for minimally invasive spinal surgery.

Chiu JC, Maziad AM.

Surg Technol Int. 2010 Oct;20:363-72.

PMID:
21082588
39.

Assaying locomotor activity to study circadian rhythms and sleep parameters in Drosophila.

Chiu JC, Low KH, Pike DH, Yildirim E, Edery I.

J Vis Exp. 2010 Sep 28;(43). pii: 2157. doi: 10.3791/2157.

40.

Evolving minimally invasive spine surgery: a surgeon's perspective on technological convergence and digital or control system.

Chiu JC, Maziad AM, Rappard G, Thacker JT, Liu B, Documet J.

Surg Technol Int. 2010 Apr;19:211-22.

PMID:
20437367
41.

Concentration effect of carbon nanotube based saturable absorber on stabilizing and shortening mode-locked pulse.

Chiu JC, Lan YF, Chang CM, Chen XZ, Yeh CY, Lee CK, Lin GR, Lin JJ, Cheng WH.

Opt Express. 2010 Feb 15;18(4):3592-600. doi: 10.1364/OE.18.003592.

PMID:
20389368
42.

Gene orthology assessment with OrthologID.

Egan M, Lee EK, Chiu JC, Coruzzi G, Desalle R.

Methods Mol Biol. 2009;537:23-38. doi: 10.1007/978-1-59745-251-9_2.

PMID:
19378138
43.

Endoscopic assisted microdecompression of cervical disc and foramen.

Chiu JC.

Surg Technol Int. 2008;17:269-79. Review.

PMID:
18802913
44.

The phospho-occupancy of an atypical SLIMB-binding site on PERIOD that is phosphorylated by DOUBLETIME controls the pace of the clock.

Chiu JC, Vanselow JT, Kramer A, Edery I.

Genes Dev. 2008 Jul 1;22(13):1758-72. doi: 10.1101/gad.1682708.

45.

Comparison of the effects of two long-acting beta2-agonists on cytokine secretion by human airway epithelial cells.

Chiu JC, Hsu JY, Fu LS, Chu JJ, Chi CS.

J Microbiol Immunol Infect. 2007 Oct;40(5):388-94.

PMID:
17932597
46.
47.
48.

Junctional disc herniation syndrome in post spinal fusion treated with endoscopic spine surgery.

Chiu JC, Clifford T, Princenthal R, Shaw S.

Surg Technol Int. 2005;14:305-15.

PMID:
16525987
49.
50.

OrthologID: automation of genome-scale ortholog identification within a parsimony framework.

Chiu JC, Lee EK, Egan MG, Sarkar IN, Coruzzi GM, DeSalle R.

Bioinformatics. 2006 Mar 15;22(6):699-707. Epub 2006 Jan 12.

PMID:
16410324

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