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Items: 29

1.

Giant tortoise genomes provide insights into longevity and age-related disease.

Quesada V, Freitas-Rodríguez S, Miller J, Pérez-Silva JG, Jiang ZF, Tapia W, Santiago-Fernández O, Campos-Iglesias D, Kuderna LFK, Quinzin M, Álvarez MG, Carrero D, Beheregaray LB, Gibbs JP, Chiari Y, Glaberman S, Ciofi C, Araujo-Voces M, Mayoral P, Arango JR, Tamargo-Gómez I, Roiz-Valle D, Pascual-Torner M, Evans BR, Edwards DL, Garrick RC, Russello MA, Poulakakis N, Gaughran SJ, Rueda DO, Bretones G, Marquès-Bonet T, White KP, Caccone A, López-Otín C.

Nat Ecol Evol. 2018 Dec 3. doi: 10.1038/s41559-018-0733-x. [Epub ahead of print]

PMID:
30510174
2.

Insights on cancer resistance in vertebrates: reptiles as a parallel system to mammals.

Chiari Y, Glaberman S, Lynch VJ.

Nat Rev Cancer. 2018 Aug;18(8):525. doi: 10.1038/s41568-018-0033-4. No abstract available.

PMID:
29891962
3.

Mixed phylogenetic signal in fish toxicity data across chemical classes.

Hylton A, Chiari Y, Capellini I, Barron MG, Glaberman S.

Ecol Appl. 2018 Apr;28(3):605-611. doi: 10.1002/eap.1698.

PMID:
29676862
4.

Application of the CometChip platform to assess DNA damage in field-collected blood samples from turtles.

Sykora P, Chiari Y, Heaton A, Moreno N, Glaberman S, Sobol RW.

Environ Mol Mutagen. 2018 May;59(4):322-333. doi: 10.1002/em.22183. Epub 2018 Mar 14.

PMID:
29536573
5.

Self-righting potential and the evolution of shell shape in Galápagos tortoises.

Chiari Y, van der Meijden A, Caccone A, Claude J, Gilles B.

Sci Rep. 2017 Nov 30;7(1):15828. doi: 10.1038/s41598-017-15787-7.

6.

Ecological and evolutionary influences on body size and shape in the Galápagos marine iguana (Amblyrhynchus cristatus).

Chiari Y, Glaberman S, Tarroso P, Caccone A, Claude J.

Oecologia. 2016 Jul;181(3):885-94. doi: 10.1007/s00442-016-3618-1. Epub 2016 Apr 4.

PMID:
27041683
7.

Description of a New Galapagos Giant Tortoise Species (Chelonoidis; Testudines: Testudinidae) from Cerro Fatal on Santa Cruz Island.

Poulakakis N, Edwards DL, Chiari Y, Garrick RC, Russello MA, Benavides E, Watkins-Colwell GJ, Glaberman S, Tapia W, Gibbs JP, Cayot LJ, Caccone A.

PLoS One. 2015 Oct 21;10(10):e0138779. doi: 10.1371/journal.pone.0138779. eCollection 2015.

8.

Phylogenetic signal in amphibian sensitivity to copper sulfate relative to experimental temperature.

Chiari Y, Glaberman S, Serén N, Carretero MA, Capellini I.

Ecol Appl. 2015 Apr;25(3):596-602.

PMID:
26214907
9.

Amelotin: an enamel matrix protein that experienced distinct evolutionary histories in amphibians, sauropsids and mammals.

Gasse B, Chiari Y, Silvent J, Davit-Béal T, Sire JY.

BMC Evol Biol. 2015 Mar 14;15:47. doi: 10.1186/s12862-015-0329-x.

10.

Comparative population genomics in animals uncovers the determinants of genetic diversity.

Romiguier J, Gayral P, Ballenghien M, Bernard A, Cahais V, Chenuil A, Chiari Y, Dernat R, Duret L, Faivre N, Loire E, Lourenco JM, Nabholz B, Roux C, Tsagkogeorga G, Weber AA, Weinert LA, Belkhir K, Bierne N, Glémin S, Galtier N.

Nature. 2014 Nov 13;515(7526):261-3. doi: 10.1038/nature13685. Epub 2014 Aug 20.

11.

Molecular evolution and functional divergence of the metallothionein gene family in vertebrates.

Serén N, Glaberman S, Carretero MA, Chiari Y.

J Mol Evol. 2014 Apr;78(3-4):217-33. doi: 10.1007/s00239-014-9612-5. Epub 2014 Feb 21.

PMID:
24557429
12.

Population genomics of the endangered giant Galápagos tortoise.

Loire E, Chiari Y, Bernard A, Cahais V, Romiguier J, Nabholz B, Lourenço JM, Galtier N.

Genome Biol. 2013 Dec 16;14(12):R136. doi: 10.1186/gb-2013-14-12-r136.

13.

The determinants of the molecular substitution process in turtles.

Lourenço JM, Glémin S, Chiari Y, Galtier N.

J Evol Biol. 2013 Jan;26(1):38-50. doi: 10.1111/jeb.12031. Epub 2012 Nov 23.

14.

Phylogenomic analyses support the position of turtles as the sister group of birds and crocodiles (Archosauria).

Chiari Y, Cahais V, Galtier N, Delsuc F.

BMC Biol. 2012 Jul 27;10:65. doi: 10.1186/1741-7007-10-65.

15.

Reference-free transcriptome assembly in non-model animals from next-generation sequencing data.

Cahais V, Gayral P, Tsagkogeorga G, Melo-Ferreira J, Ballenghien M, Weinert L, Chiari Y, Belkhir K, Ranwez V, Galtier N.

Mol Ecol Resour. 2012 Sep;12(5):834-45. doi: 10.1111/j.1755-0998.2012.03148.x. Epub 2012 Apr 30.

PMID:
22540679
16.

Phylogeography of Sardinian cave salamanders (genus Hydromantes) is mainly determined by geomorphology.

Chiari Y, van der Meijden A, Mucedda M, Lourenço JM, Hochkirch A, Veith M.

PLoS One. 2012;7(3):e32332. doi: 10.1371/journal.pone.0032332. Epub 2012 Mar 12.

17.

Morphometric identification of individuals when there are more shape variables than reference specimens: a case study in Galápagos tortoises.

Chiari Y, Claude J.

C R Biol. 2012 Jan;335(1):62-8. doi: 10.1016/j.crvi.2011.10.007. Epub 2011 Dec 9.

PMID:
22226164
18.

Dating cryptodiran nodes: origin and diversification of the turtle superfamily Testudinoidea.

Lourenço JM, Claude J, Galtier N, Chiari Y.

Mol Phylogenet Evol. 2012 Jan;62(1):496-507. doi: 10.1016/j.ympev.2011.10.022. Epub 2011 Nov 12.

PMID:
22100825
19.

Next-generation sequencing of transcriptomes: a guide to RNA isolation in nonmodel animals.

Gayral P, Weinert L, Chiari Y, Tsagkogeorga G, Ballenghien M, Galtier N.

Mol Ecol Resour. 2011 Jul;11(4):650-61. doi: 10.1111/j.1755-0998.2011.03010.x. Epub 2011 Apr 12.

PMID:
21481219
20.

Study of the carapace shape and growth in two Galápagos tortoise lineages.

Chiari Y, Claude J.

J Morphol. 2011 Mar;272(3):379-86. doi: 10.1002/jmor.10923. Epub 2011 Jan 18.

PMID:
21246597
21.

On the possible role of tRNA base modifications in the evolution of codon usage: queuosine and Drosophila.

Chiari Y, Dion K, Colborn J, Parmakelis A, Powell JR.

J Mol Evol. 2010 Apr;70(4):339-45. doi: 10.1007/s00239-010-9329-z. Epub 2010 Mar 24.

PMID:
20333371
22.

Base composition, selection, and phylogenetic significance of indels in the recombination activating gene-1 in vertebrates.

Chiari Y, van der Meijden A, Madsen O, Vences M, Meyer A.

Front Zool. 2009 Dec 16;6:32. doi: 10.1186/1742-9994-6-32.

23.

Morphometrics parallel genetics in a newly discovered and endangered taxon of Galápagos tortoise.

Chiari Y, Hyseni C, Fritts TH, Glaberman S, Marquez C, Gibbs JP, Claude J, Caccone A.

PLoS One. 2009 Jul 17;4(7):e6272. doi: 10.1371/journal.pone.0006272.

24.

Phylogenetic relationships of Sardinian cave salamanders, genus Hydromantes, based on mitochondrial and nuclear DNA sequence data.

van der Meijden A, Chiari Y, Mucedda M, Carranza S, Corti C, Veith M.

Mol Phylogenet Evol. 2009 May;51(2):399-404. doi: 10.1016/j.ympev.2008.12.011. Epub 2008 Dec 24. No abstract available.

PMID:
19136065
25.
26.

Mitochondrial evidence for distinct phylogeographic units in the endangered Malagasy poison frog Mantella bernhardi.

Vieites DR, Chiari Y, Vences M, Andreone F, Rabemananjara F, Bora P, Nieto-Román S, Meyer A.

Mol Ecol. 2006 May;15(6):1617-25.

PMID:
16629815
27.

Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians.

Vences M, Thomas M, van der Meijden A, Chiari Y, Vieites DR.

Front Zool. 2005 Mar 16;2(1):5.

28.

New evidence for parallel evolution of colour patterns in Malagasy poison frogs (Mantella).

Chiari Y, Vences M, Vieites DR, Rabemananjara F, Bora P, Ramilijaona Ravoahangimalala O, Meyer A.

Mol Ecol. 2004 Dec;13(12):3763-74.

PMID:
15548289
29.

High mitochondrial diversity within and among populations of Malagasy poison frogs.

Vences M, Chiari Y, Raharivololoniaina L, Meyer A.

Mol Phylogenet Evol. 2004 Feb;30(2):295-307.

PMID:
14715222

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